Basic Information

Insect: Drosophila yakuba
Gene Symbol: -
Assembly: GCA_016746365.1
Location: NC:27178798-27183707[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0016 0.094 13.6 0.8 1 23 227 249 227 249 0.96

2 25 0.62 38 5.4 2.3 1 19 255 273 255 277 0.80

3 25 0.0018 0.11 13.4 0.4 2 23 309 330 308 330 0.97

4 25 0.011 0.69 10.9 4.4 1 23 403 426 403 426 0.94

5 25 1.3 82 4.4 4.0 1 23 466 488 466 489 0.95

6 25 0.0061 0.37 11.8 0.2 2 23 499 520 498 520 0.96

7 25 0.96 58 4.8 0.1 1 23 597 620 597 620 0.93

8 25 0.021 1.3 10.1 3.0 2 21 630 649 629 650 0.93

9 25 0.095 5.7 8.0 3.9 1 23 659 681 659 682 0.95

10 25 0.012 0.71 10.8 2.2 2 23 696 717 695 717 0.97

11 25 0.0004 0.024 15.5 7.1 1 23 725 747 725 747 0.97

12 25 0.0047 0.28 12.1 0.6 1 23 885 908 885 908 0.95

13 25 0.12 7.3 7.7 2.5 2 23 916 939 915 939 0.91

14 25 0.0087 0.53 11.3 1.0 1 23 945 968 945 968 0.97

15 25 9.2e-05 0.0056 17.5 1.9 2 23 987 1008 986 1008 0.97

16 25 0.00031 0.019 15.8 1.0 1 23 1015 1037 1015 1037 0.98

17 25 0.11 6.7 7.8 0.0 2 21 1064 1083 1063 1084 0.92

18 25 1.4 86 4.3 3.6 1 23 1134 1157 1134 1157 0.95

19 25 0.02 1.2 10.1 0.5 1 23 1194 1217 1194 1217 0.95

20 25 0.0025 0.15 13.0 2.5 1 23 1243 1266 1243 1266 0.98

21 25 8.5e-06 0.00052 20.7 0.2 2 23 1291 1312 1290 1312 0.95

22 25 0.00037 0.023 15.6 3.5 1 23 1318 1340 1318 1340 0.99

23 25 3.4e-06 0.0002 22.0 2.0 1 23 1346 1368 1346 1368 0.97

24 25 3e-07 1.8e-05 25.3 2.4 1 23 1374 1396 1374 1396 0.99

25 25 0.0015 0.092 13.6 0.2 1 22 1402 1423 1402 1426 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0016	0.094	13.6	0.8	1	23	227	249	227	249	0.96
2	25	0.62	38	5.4	2.3	1	19	255	273	255	277	0.80
3	25	0.0018	0.11	13.4	0.4	2	23	309	330	308	330	0.97
4	25	0.011	0.69	10.9	4.4	1	23	403	426	403	426	0.94
5	25	1.3	82	4.4	4.0	1	23	466	488	466	489	0.95
6	25	0.0061	0.37	11.8	0.2	2	23	499	520	498	520	0.96
7	25	0.96	58	4.8	0.1	1	23	597	620	597	620	0.93
8	25	0.021	1.3	10.1	3.0	2	21	630	649	629	650	0.93
9	25	0.095	5.7	8.0	3.9	1	23	659	681	659	682	0.95
10	25	0.012	0.71	10.8	2.2	2	23	696	717	695	717	0.97
11	25	0.0004	0.024	15.5	7.1	1	23	725	747	725	747	0.97
12	25	0.0047	0.28	12.1	0.6	1	23	885	908	885	908	0.95
13	25	0.12	7.3	7.7	2.5	2	23	916	939	915	939	0.91
14	25	0.0087	0.53	11.3	1.0	1	23	945	968	945	968	0.97
15	25	9.2e-05	0.0056	17.5	1.9	2	23	987	1008	986	1008	0.97
16	25	0.00031	0.019	15.8	1.0	1	23	1015	1037	1015	1037	0.98
17	25	0.11	6.7	7.8	0.0	2	21	1064	1083	1063	1084	0.92
18	25	1.4	86	4.3	3.6	1	23	1134	1157	1134	1157	0.95
19	25	0.02	1.2	10.1	0.5	1	23	1194	1217	1194	1217	0.95
20	25	0.0025	0.15	13.0	2.5	1	23	1243	1266	1243	1266	0.98
21	25	8.5e-06	0.00052	20.7	0.2	2	23	1291	1312	1290	1312	0.95
22	25	0.00037	0.023	15.6	3.5	1	23	1318	1340	1318	1340	0.99
23	25	3.4e-06	0.0002	22.0	2.0	1	23	1346	1368	1346	1368	0.97
24	25	3e-07	1.8e-05	25.3	2.4	1	23	1374	1396	1374	1396	0.99
25	25	0.0015	0.092	13.6	0.2	1	22	1402	1423	1402	1426	0.91

Sequence Information

Coding Sequence: AtgattttcataaatattctGGTCGAAAATCATGAGCTAAGTGAGCTCACCCCGGCAAAAATGCTTCCGTCGGATATTTGCCGCACCTGTGCGGCGCAGAACAACCAATTGCTGCCCTTGTCCACTCGCCTGGACAGAGACGCCTCCAAAAGCTACTATGCGGTGCTCCAGGAACTGACGCAAATCGATGTGGAGAGCTCCGATGACAACCTGCCGCAACATCTATGCACCGAGTGCTGGACGCGAATGGAAGGTGCCTACGCCTTTGTGCAGCAGGCCAGGAGAGTCAATGGAGAGCTGCTGGCGCGGCTAAGGGAATGTCTGGATGAAATGCCCATTGATATTCCCGCGGAGCAGAACATTAAAACGGAAGTGGACCTCGATGATGGCGGCAACAAGCCCGGAGTGGAGGTGGACGCCACCGAAACGGAGGCTTTGGAGCTGAAGTGGCAACCGGAGAGTGACAGCGATCAGGAATTTGGTGCTGCGCCGGAAAGTGATGAAGATCAAGTGGAAAAGAAGTCCTATCATCTGCGTCGAAGCTCCCGAAAAGTAAAGCAGCCAGTGGAAAGCGAAAATGAGGAATGTAAGCCATCTGAAGAACCATCGCCCGTTAAGCGCCGTCGAGGACGTCCACCTGGTCCAGCGAAAAGCCAAGCGATGACCACTGATGGCCGCCACGCATGTGAAGTGTGCGGAAAGACATTCTCCTGGTACCGCGACATGCAGCGCCACGCCAGGATCCACTTCGAGAACGCTTCCTACGTGTGCGATATCTGTGGCAAGGGATTTCTGCGCAAGGACAAGTACATATTCCATCTACGATGCCACAAGAAGCGGGAAGCCAAATGGAAAGCTCTCCAGCTCGGAAAAGAGTGGCGTTTTGCTGAGCGTCTCTACAGCTCAGGGAGGTTGAAAAGAGTGGAGTGTAAGCTGTGCGGGTCGATTTTCCAACGAATGGAGGAGCTTAGAACTCACCTAAGGAGTCATGCAGATGTGGAGACCTTAACCAACTTGAGAAGGGATAGTGACGTGGTAAGGGAGCATTTTCCTGGCTTGCCTTGTGACTTGGACAATATTAGGCAACAGATCTGCAGTGAAATAGCAGAAGGTCATTTGGAGAAGTATGCATGTGTTGTGAATTTCCACGGATACGAGCTGGGACTCAGTGATTCCGATGAGGAAAGCGACAGCAAAGAGTCTAAATACCATTGCTTGGTGTGCAATATGTCTTTCAATCGCAAACATCGTCTGATGAGACACACCCTGGAGGACCACTCCCAATCTGCGACAACGCTTCCCTGGCAGCGCTGCAGTTCCTGCAAAGTTGGTTTCCTATGCCTAACGATCTACAACAAACATTTGAACACGCATTGCCACAGCCAAATACGTAGATATCGGTGTCGTAAATGTTCCGGGAGGTTTATGTGGCCGGAAAACCTTCAAAGACACGCGTGCTCCCACCACGAGGAGAAAACGATTGCCAGCCAAATAATGTGCTCCTTGTGCGAAACCTCGCTAGCTAGCTTATCGCAACTTCGCCTTCACCTACTCACACACCAACATGATTTGAATGGCATTAATCCGGCGTACAATTCCATGTTCTTTCGGTCGTTTTATCCTGACGGTTTGAAGTGCACTATCTCGGATCTGGCTGCGCGTATAGCTGAGGATTTCGAGGTTCAGGACTTTGATCGCTATTATAACGCCAGCACCGAAAGTGGACAGGAGCTCGATCTTTTTGAATCCGAGTCAGAGTTGAGCGACGTGGAGACTTCAAAACCAACGCACATCTGTCTTTTATGTGGAGAAGTTACGAGTTCACTGACGATCCTGATGCAGCACCAAATAAGCGCACATTCCGATGGGGTGACTGAGCTTCCTTGTCACTGCGAGTACTGTGGATCTGGCTTCGTAAGCAAAGCCCTTCTACAACAACACCGTAGGCACCGCTGCGAAAAGAAACACTCCCGATTTCACTGCCGAGTTTGCAATATCCGGTTCATATGGGAGTCGAACTATGAGAAACACCAACTGACTCACCATAACAAAACGAAAGATGGAGAAGAGGAACCCACAAAGTTGAAGTGCGACCAGTGCGAAAAGgTATTCATCTGGCACAAAGATCTCAATCGTCACAAACGACTGCATCAGCCTCAGTCGGCTGCCCAGTTCGACTGTCCCCATTGCCATCGTAGGTTCCACCGCAAGGATGGCCTAAAGTCCCACCTAAAAGTGCACGCCGGAAATTCAGATTACGTAAATAATCAGCCTGTCGTACCTGACGCTTACCAGGAAATGACTCTGGCCAGACTGGGTCGTCCTCACGGTTGCAAGCTGATTCAGTGCATGATCTGTCTCTCACGTCACTCAAAGATCAGTGATCTCAGGTCTCACATGAGCTCCCATCAATATGAACTCAGTTTTACCGAAGACAGAGATATTCCAAGTGCCTCGAGAGCCTTTTACCCAGATCTGGAAAATACCTTAGAACGAGATGAACTGGCCGGAAGGATTATGGCTGATGTGCAAAAGGAGTTTAACTTAGACCGTTTTATTTCCATCACAAACGAGGCCGGCCTGGAGCTGAATCTCGATAGTAGCGAAACTGATACTGAGGCCGAGCAGGAGGAGGATCAGTCATCTCCAAACTATCCTTGCAACCTCTGTACGGTGGTTGTAAAGAGAAAGCATCAGTTGTATGCCCACCAACTGGAGGAGCACAAGTGGGAGGAGGCGCTCCTGGTATGTTCCAACTGCCAGGCTAGATTTGTCAATGAATCTTTGCTCGATCACCACTCCAGAACCCTTTGCCACAATCCGCAAAAGCTCTTCCAGTGCCGTAAGTGTCCGCTTCGTTACCGCTGGCGGGACAATCTGAAGCTCCACATGGAAGTATTCCATCAGCTAGATGAGCTGTCAATCCAGAATGATTCACCCAAAGCAGATGGCGATCTGCAGTGCGGAAAGTGTCAGCGCAGCTTTAGGATGCAAAAGGATCTCACGCGTCATACATTAATGCACGGTCAGGAATCAAACATCTTCCGATGCCGTTGGTGTGCACGTCGCTTTTATCGCAAAGCCAATCTTTTACAGCACATCGCACGTCACGGGATAATTGTAAACCAGTTGCCTTATGCTGAGGCTATACTGGACTCATATGTGAATCCTGGTGGCCGAAAAAAGGTGGAGTGCCGAGTGTGCAACGTAAGCTTTCCCACCATCGCGGCTTTGCGACTGCATCTGGAAACCATGCCCGCCGGTAGTCACCACGACTACTCCTCGCTTCAAAACTACTCGATTACCAACCAAATGGGCTTCGAGATGGATTTGGATGATTCCGAgactgatgatgatgaggctAGGACACACACAAAACCACCAGGAGCTCCTGCCTCCTATACCTGCAATATGTGCCAACTGAGGTGTTTGCGGAAATTCGAGTTGTATCAACACCAGCAGGCTATGCACCGGATGGAAAAGATCTCCGACGGCTGTAATAGTTGCTTATTCAAGAGCGTTTGTCCAGAAATTATTTCCCACCACAAAAGAACTCAGTGCGAAAACCGAGAAAAGCAGTTCAAATGCGCACGCTGCGGTTACAAGTTCATGTGGGAGTCAAACCTTTTGCAGCACATGGAGTTGCAGCATGAAAAGCATGGGGATCTGGAGCTGGATGAGTCGAAGGAAGCGTCTGGTGACGAGCCAAAAGCCGAAGGTCAGGTCTTTCAGTGTGGACTTTGTACAAGGAAGTACAACCGCAAGGACCGGTTAAGTGCGCACTTGAAAAAATTCCATGGGCCTGACTGCAAACCGAATCCAGCGAAAACTTCAAACAGACCGATATCCCCTAAGGAACCAAAGCGTTTCCTGTGTGCTTTCTGCGGCAAAGCGGTCAGCTCCTCCTCCAACTTAATCATCCACATGCGTCGCCATACCGGTGAGAAGCCCTTCAAGTGCGAGTACTGCACCATGGCCTTCCCCCGATCCTCTGATCTCCAGTGCCACCGACGGACGCACACCGGCGAACGTCCACATGTATGCACAGTGTGTCAAAAGGGATTCGCCCGCTCctacaagctgcagcagcacatGCGAATCCACAGCGGGGAGAGGCCCTACAAGTGCACCTACTGCGAGAAGAGCTTCACGCAATCCAACGACCTGACCCTGCACATCCGGCGGCACACTGGCGAGCGTCCCTACCAATGCGGCGTCTGCGGAGAGCGCTTCATCCAGGGCACTGCTTTAAAGAACCATCGCATGCAGCAGAGCCACTACGAGGAGGGTCAGGAATCAGGACAGGAGCCCACGAGGCGCACGGTTCTGGAGCAGTTTACTCTATGA
Protein Sequence: MIFINILVENHELSELTPAKMLPSDICRTCAAQNNQLLPLSTRLDRDASKSYYAVLQELTQIDVESSDDNLPQHLCTECWTRMEGAYAFVQQARRVNGELLARLRECLDEMPIDIPAEQNIKTEVDLDDGGNKPGVEVDATETEALELKWQPESDSDQEFGAAPESDEDQVEKKSYHLRRSSRKVKQPVESENEECKPSEEPSPVKRRRGRPPGPAKSQAMTTDGRHACEVCGKTFSWYRDMQRHARIHFENASYVCDICGKGFLRKDKYIFHLRCHKKREAKWKALQLGKEWRFAERLYSSGRLKRVECKLCGSIFQRMEELRTHLRSHADVETLTNLRRDSDVVREHFPGLPCDLDNIRQQICSEIAEGHLEKYACVVNFHGYELGLSDSDEESDSKESKYHCLVCNMSFNRKHRLMRHTLEDHSQSATTLPWQRCSSCKVGFLCLTIYNKHLNTHCHSQIRRYRCRKCSGRFMWPENLQRHACSHHEEKTIASQIMCSLCETSLASLSQLRLHLLTHQHDLNGINPAYNSMFFRSFYPDGLKCTISDLAARIAEDFEVQDFDRYYNASTESGQELDLFESESELSDVETSKPTHICLLCGEVTSSLTILMQHQISAHSDGVTELPCHCEYCGSGFVSKALLQQHRRHRCEKKHSRFHCRVCNIRFIWESNYEKHQLTHHNKTKDGEEEPTKLKCDQCEKVFIWHKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYVNNQPVVPDAYQEMTLARLGRPHGCKLIQCMICLSRHSKISDLRSHMSSHQYELSFTEDRDIPSASRAFYPDLENTLERDELAGRIMADVQKEFNLDRFISITNEAGLELNLDSSETDTEAEQEEDQSSPNYPCNLCTVVVKRKHQLYAHQLEEHKWEEALLVCSNCQARFVNESLLDHHSRTLCHNPQKLFQCRKCPLRYRWRDNLKLHMEVFHQLDELSIQNDSPKADGDLQCGKCQRSFRMQKDLTRHTLMHGQESNIFRCRWCARRFYRKANLLQHIARHGIIVNQLPYAEAILDSYVNPGGRKKVECRVCNVSFPTIAALRLHLETMPAGSHHDYSSLQNYSITNQMGFEMDLDDSETDDDEARTHTKPPGAPASYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGCNSCLFKSVCPEIISHHKRTQCENREKQFKCARCGYKFMWESNLLQHMELQHEKHGDLELDESKEASGDEPKAEGQVFQCGLCTRKYNRKDRLSAHLKKFHGPDCKPNPAKTSNRPISPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRMQQSHYEEGQESGQEPTRRTVLEQFTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548203;
90% Identity: iTF_00591827;
80% Identity: -