Basic Information

Insect: Drosophila pseudotakahashii
Gene Symbol: -
Assembly: GCA_035046095.1
Location: JAWNOE010000121.1:1048409-1052915[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0023 0.2 12.5 0.8 1 23 208 230 208 230 0.95

2 25 2.6 2.2e+02 2.9 3.3 1 20 236 255 236 258 0.80

3 25 0.0014 0.12 13.2 1.5 3 23 291 311 289 311 0.97

4 25 0.01 0.87 10.5 0.8 1 23 384 407 384 407 0.89

5 25 1.5 1.3e+02 3.6 1.0 1 20 448 467 448 470 0.93

6 25 0.083 7 7.6 0.0 3 23 483 503 482 503 0.98

7 25 6.2 5.3e+02 1.7 0.5 1 23 578 601 578 601 0.92

8 25 0.0023 0.2 12.5 1.8 2 21 611 630 610 631 0.93

9 25 0.095 8 7.4 6.1 1 23 640 662 640 663 0.95

10 25 0.00081 0.068 14.0 1.5 2 23 676 697 675 697 0.97

11 25 0.00027 0.022 15.5 7.1 1 23 705 727 705 727 0.97

12 25 0.028 2.3 9.1 0.2 1 23 865 888 865 888 0.94

13 25 0.18 16 6.5 3.5 2 23 896 919 895 919 0.91

14 25 0.085 7.2 7.6 0.9 1 23 925 948 925 948 0.94

15 25 6.2e-05 0.0052 17.5 2.0 2 23 967 988 966 988 0.97

16 25 0.00032 0.027 15.2 0.9 1 23 995 1017 995 1017 0.98

17 25 0.063 5.3 8.0 0.0 2 21 1044 1063 1043 1064 0.92

18 25 0.0032 0.27 12.1 2.9 1 23 1114 1137 1114 1137 0.96

19 25 0.021 1.8 9.5 0.9 1 23 1174 1197 1174 1197 0.96

20 25 0.00077 0.065 14.0 3.0 1 23 1223 1246 1223 1246 0.98

21 25 5.6e-06 0.00047 20.7 0.2 2 23 1272 1293 1271 1293 0.95

22 25 5.9e-05 0.005 17.5 2.4 1 23 1299 1321 1299 1321 0.99

23 25 2.2e-06 0.00019 22.0 2.0 1 23 1327 1349 1327 1349 0.97

24 25 2e-07 1.6e-05 25.3 2.4 1 23 1355 1377 1355 1377 0.99

25 25 0.00052 0.044 14.6 0.1 1 22 1383 1404 1383 1407 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0023	0.2	12.5	0.8	1	23	208	230	208	230	0.95
2	25	2.6	2.2e+02	2.9	3.3	1	20	236	255	236	258	0.80
3	25	0.0014	0.12	13.2	1.5	3	23	291	311	289	311	0.97
4	25	0.01	0.87	10.5	0.8	1	23	384	407	384	407	0.89
5	25	1.5	1.3e+02	3.6	1.0	1	20	448	467	448	470	0.93
6	25	0.083	7	7.6	0.0	3	23	483	503	482	503	0.98
7	25	6.2	5.3e+02	1.7	0.5	1	23	578	601	578	601	0.92
8	25	0.0023	0.2	12.5	1.8	2	21	611	630	610	631	0.93
9	25	0.095	8	7.4	6.1	1	23	640	662	640	663	0.95
10	25	0.00081	0.068	14.0	1.5	2	23	676	697	675	697	0.97
11	25	0.00027	0.022	15.5	7.1	1	23	705	727	705	727	0.97
12	25	0.028	2.3	9.1	0.2	1	23	865	888	865	888	0.94
13	25	0.18	16	6.5	3.5	2	23	896	919	895	919	0.91
14	25	0.085	7.2	7.6	0.9	1	23	925	948	925	948	0.94
15	25	6.2e-05	0.0052	17.5	2.0	2	23	967	988	966	988	0.97
16	25	0.00032	0.027	15.2	0.9	1	23	995	1017	995	1017	0.98
17	25	0.063	5.3	8.0	0.0	2	21	1044	1063	1043	1064	0.92
18	25	0.0032	0.27	12.1	2.9	1	23	1114	1137	1114	1137	0.96
19	25	0.021	1.8	9.5	0.9	1	23	1174	1197	1174	1197	0.96
20	25	0.00077	0.065	14.0	3.0	1	23	1223	1246	1223	1246	0.98
21	25	5.6e-06	0.00047	20.7	0.2	2	23	1272	1293	1271	1293	0.95
22	25	5.9e-05	0.005	17.5	2.4	1	23	1299	1321	1299	1321	0.99
23	25	2.2e-06	0.00019	22.0	2.0	1	23	1327	1349	1327	1349	0.97
24	25	2e-07	1.6e-05	25.3	2.4	1	23	1355	1377	1355	1377	0.99
25	25	0.00052	0.044	14.6	0.1	1	22	1383	1404	1383	1407	0.91

Sequence Information

Coding Sequence: ATGCTTCCCTCGGACATTTGTCGCACCTGTGGCCTGCACAACGTACATTTGCTGCCCTTGTCCACCTGCCTGGACAGAGACGCCTCCAAAAGTTACTACGATGTGCTCCGGTCACTGACGCAAATCGATACCCCGCTGGAGAGCTCGGATGATAGTCTGCCGCAGCATCTGTGCGCCGATTGCTGGACGAGATTGCAGAATGCCCATGCCTTTGTGGAGCAGGCCAAAAGGGTCAATGGAGAGCTACTGGCTCGCCTCAGGGAATGTCTGGATGAAATGCCCATCGACATTCCCCAGGAGGAGCAGAACATAAAGACCGAGGTGGACCTCGATGATGAGGGCAACAAGTGCGACGATGTGGAATCCACTGGACTAGCAACACTCGAGCTCAAGTGGCAGCCTGAAAGTGGCAGCGATGAGGAGTTTCTTGATGCAGCGGAGAGCGATGAAGATGAAGTGGATCCGAAGACCTATCATCTGCGTCGAAGTTCCCGGAAGGTCAAGCAGGCAGTGGAAAGCGAAGATGAGGACGTTAAACCACCTGAACCATCGCCCGTCAAACGGCGTCGAGGACGACCACCTGGACCAGCTAAGAGTACGTCGATAACCACTGATGGTCGCCACGCATGCGAGGTGTGCGGAAAGACCTTCTCCTGGTACCGCGACATGCAGCGCCACGCCAAAATTCACTTCGAGCAGGCCTCGTTCGTGTGCGATACCTGTGGCAAGGGATTCCTGCGCAAGGACAAGTACATGTTCCACCTTCGATGTCACAAGAAGCGCGAGGCCAAGTGGAAGGCTCTCCAGGTGGGCAAGGAATGGCGCTTCGCTGAGCGTCTCTACAGCTCCGGCAGGTTAAAGAAAATCGACTGCAAGTTGTGCGGTTTGAGTTGCCAGCGAATGGAGGAACTTCGAACTCACATTAAGACTCATGTGAACGTCGAGAGCTTAGACAATTTGAGAAAGGATAGCGATGTGGTCAGGGAGCACTTCCCAGGCTTTCCGTGCGACCTGGACACTATTAAGCAACAGATCTGCGCCGAAATAGCCGAAGGGCATTCTGAGAAGTTTGCCTGCATTGTGAATTTCCACGGCTATGAGTTGGGGCTCAGCGATTCCGATGAAGAGTGTGACAGCAAAGAGTCCAAGTATAATTGCATTGTGTGCAATCTGTCTTTCACCCGGAAATATCGCTTGATAAAGCACACACTGGAGGAGCACTCCCAATCCAACGCTTCAACACTTCCTTGGCAGCGCTGCAGTTCCTGTAAAGTTGGATTCCTGTGCCTAACACTCTTAAACCAACACTTGAGCAACCATTGCCACAGCAAGATAAAGAGATATCGCTGCCGTAAATGTCCAGGGAAGTTTATGTGGCCGGATAACCTGCAAAACCACGCGTGCCCACATGAGGATGAGGACAAGACGATACCCAAGCAGATATTGTGCTCCTTGTGCGATGCTGCCCTACCGAGTTTGGCTCAACTTCGCATTCACTTAACCACTCACCAGCATGATTTGAATGGCATTAGTCCGGAGTACAATTCATCCTTCTTTCGCACGTTTTACCCTGATGGATTGGACTGCACTGCCTCGGATCTTGCTGCTCGCATAGCTGAGGACTTCGAGGTCCAGGATTTTGATCGCTACTACAACGTCTGTACTGAAAGTGGACAAGAACTGGATCTTTTTGATTCTGAAACCGAGCAGAGCGATGAGGAGACCAAGACACACACTTGTCTGCTCTGCGGAGATGTTGCGAGTACACTGACGATTCTGATGCAGCACCAAAAGACCCTGCATGCTGATGGTGCGACCGATCTTCCCTGTCCCTGCGAAAATTGTGGAGCTCGGTTCGTCAGCAAAACTTTGCTGCAACAACATCGCAGGCATCGGTGCTCCAAGAAACACTCTCGTTTTCACTGCCAGAATTGCAGCGTCCGGTTCGTGTGGCAATCCAACTATAAGCGCCACCTGAAGTCGCACCATAACAAAAATGAAGATGAAGAACTGGCCACCAAGTTGCAATGCGACGAATGCGATAAGGTGTTCATCTGGCACAAAGATCTCAACCGTCACAAGCGACTCCATCAACCGCAGTCGGCAGCCCAGTTCGACTGTCCCCATTGCCACCGCAGATTCCACCGCAAGGATGGTCTAAAGTCCCACCTAAAAGTTCATGCTGGAGAACCAGCTCAAGTAAGGGAGCTGCGTACAGTACCTAACGTTGACCAAGGATTGGCTTTGACCCGGCTTAGTCGACCTCATGGCTGCAAGCTGATTCAGTGCATGATCTGCCTCTCAAGCCACTCGAAGATCAGTGATCTGAGGACTCACATGGGCTCCCATCAATACGGATTAAGTTTCACCGAAGATAGAGATATTCCTAGTGCCTCGAAAGCTTTTTACCCCGAACTGGAACCTGCCTTAGAAAGGAACGAACTTGCCGTAAGGATTATGGCTGATGTGGAAAAGGGATTCGAGTTGGATCGATTTATTTCCATCACAAATGAGGCTGGCCTAGAACTGAATCTCGACAGCAGTGAAACTGATACAGAGTCCGACCAAGAGGAGGATCAATCAGCTCGGAGCTATGCCTGCAATCTCTGTGCAGCGGTTGTGAGGAGAAAGCATCAGTTGTATGCCCACCAGCTGGCGGAGCACAAGTGGGAGGCATCATCTCTTGTATGCTCCCATTGCCAGGCTAGGTTTGTTAACGAAGCTTTGCTAGATCATCACTCCAGAACCCTCTGTCACAATGCGCAGAAGGTCTTTCAGTGCCGCAAGTGTGCGCTTCGCTTCCGCTGGCGGGAGAATCTTAAGATCCACTTGGAGCTGTACCATCAGCAAGCCGAAATGGCAGTCCCAGATGAATTCCCCCAAGCAGAAGGCGATCTGCAGTGCGGAAAGTGCCAGCGCAGCTTCAAGATGCAGAAGGATCTCACGCGTCATACACTTATGCACGGCCAGGAGTCGAACATCTTCCGCTGCCGTTGGTGTGCACGTCGCTTCTATCGCAGGGCCAATCTTCTACAGCACATCGCTCGGCATGGCATAAGTGTAAGCCAATTGCCTTATGCTGAGGCAATCCTGGACTCATATGGGAATCCTGGAGGTCAGAAGAAGGTGGAGTGCCGGGTGTGCAGTGAGAGCTTTCCCACCATCGCGGCACTTCGTTTGCATCTGGAAACCATGCCCACAGGTAGTCACCACGACTTCTCCTCACTTCAAAACTACTCTATTACCAACCAGTTGGGCTACGAAATGGACTTGGATGATTCGGAGACCGATAATGATGACGCTAGGACACATACAAAACCACCTGGCGCCCCTGATTCTTACACCTGTGGTATGTGCCAACTGAGGTGTTCGCGGAAGTACGAGCTTTATCAGCACCAGCAGGCCATGCATCGGATGGAGAAGATCCCCGACGGCTGTGGCAGGTGCATCTTCAAGAGCGTCTGTCCGGAAATCATTTCCCATCATAAGAAGACGCAGTGTGAAAACCGGGAAAAGCAGTTCACATGCACTCGTTGCGGTTTCAAGTTCATGTGGGAATCTAATCTGTTGCTTCACATGCAGTTGCAGCATGAAAAGGTGGAGGATCAAGATCTCGATGAATCCAAGGAGGCGTCTGGTGATGAACCAAAAGCCGAGTGCCAGGTCTTTAAGTGCGGCCTTTGTACGAGGAAATACAACCGCAAGGATCGGCTCACGGCGCACTTGAAGAAGTTCCATGGTCCCGATGGCAAGGGCCCCAGTCAAGCGAAGGTCTCGAATAGACCAACATCTCCCAAGGAACCGAAGCGGTTCCTGTGTGCCTTTTGTGGCAAGGCGGTCAGTTCCTCGTCCAATCTTATCATCCACATGCGCCGCCATACCGGGGAGAAGCCTTTCAAGTGCGATTATTGCCCAATGGCCTTCCCCCGATCCTCTGACCTCCAGTGCCACCGTCGGACTCACACCGGCGAACGTCCACATGTGTGCACCGTCTGCCAGAAGGGATTCGCCCGCTCGTACAAACTGCAGCAGCACATGCGAATCCACAGCGGGGAGCGTCCCTACAAGTGCACCTATTGCGAGAAAAGTTTTACGCAGTCCAACGACCTGACTCTTCACATCCGCCGGCACACAGGCGAGCGACCCTACCAGTGCGGAATCTGCGGGGAGCGTTTTATCCAGGGCACCGCCCTGAAGAACCATCGTATGCAGCAGGGCCACTACGAGGAGGGACAGGAGTTGGGCGAGCCTACGAGGCGCACGGTTCTGGAGCAGTTTAGTATATAA
Protein Sequence: MLPSDICRTCGLHNVHLLPLSTCLDRDASKSYYDVLRSLTQIDTPLESSDDSLPQHLCADCWTRLQNAHAFVEQAKRVNGELLARLRECLDEMPIDIPQEEQNIKTEVDLDDEGNKCDDVESTGLATLELKWQPESGSDEEFLDAAESDEDEVDPKTYHLRRSSRKVKQAVESEDEDVKPPEPSPVKRRRGRPPGPAKSTSITTDGRHACEVCGKTFSWYRDMQRHAKIHFEQASFVCDTCGKGFLRKDKYMFHLRCHKKREAKWKALQVGKEWRFAERLYSSGRLKKIDCKLCGLSCQRMEELRTHIKTHVNVESLDNLRKDSDVVREHFPGFPCDLDTIKQQICAEIAEGHSEKFACIVNFHGYELGLSDSDEECDSKESKYNCIVCNLSFTRKYRLIKHTLEEHSQSNASTLPWQRCSSCKVGFLCLTLLNQHLSNHCHSKIKRYRCRKCPGKFMWPDNLQNHACPHEDEDKTIPKQILCSLCDAALPSLAQLRIHLTTHQHDLNGISPEYNSSFFRTFYPDGLDCTASDLAARIAEDFEVQDFDRYYNVCTESGQELDLFDSETEQSDEETKTHTCLLCGDVASTLTILMQHQKTLHADGATDLPCPCENCGARFVSKTLLQQHRRHRCSKKHSRFHCQNCSVRFVWQSNYKRHLKSHHNKNEDEELATKLQCDECDKVFIWHKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGEPAQVRELRTVPNVDQGLALTRLSRPHGCKLIQCMICLSSHSKISDLRTHMGSHQYGLSFTEDRDIPSASKAFYPELEPALERNELAVRIMADVEKGFELDRFISITNEAGLELNLDSSETDTESDQEEDQSARSYACNLCAAVVRRKHQLYAHQLAEHKWEASSLVCSHCQARFVNEALLDHHSRTLCHNAQKVFQCRKCALRFRWRENLKIHLELYHQQAEMAVPDEFPQAEGDLQCGKCQRSFKMQKDLTRHTLMHGQESNIFRCRWCARRFYRRANLLQHIARHGISVSQLPYAEAILDSYGNPGGQKKVECRVCSESFPTIAALRLHLETMPTGSHHDFSSLQNYSITNQLGYEMDLDDSETDNDDARTHTKPPGAPDSYTCGMCQLRCSRKYELYQHQQAMHRMEKIPDGCGRCIFKSVCPEIISHHKKTQCENREKQFTCTRCGFKFMWESNLLLHMQLQHEKVEDQDLDESKEASGDEPKAECQVFKCGLCTRKYNRKDRLTAHLKKFHGPDGKGPSQAKVSNRPTSPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCPMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGICGERFIQGTALKNHRMQQGHYEEGQELGEPTRRTVLEQFSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548203;
90% Identity: iTF_00605711;
80% Identity: -