Basic Information

Insect: Drosophila ficusphila
Gene Symbol: -
Assembly: GCA_018152265.1
Location: JAECXK010000775.1:20105510-20110260[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0014 0.1 13.0 0.9 1 23 207 229 207 229 0.97

2 25 1.1 77 3.9 3.1 1 21 235 255 235 257 0.84

3 25 0.92 65 4.1 2.6 2 23 289 310 288 310 0.95

4 25 0.0099 0.7 10.3 5.2 1 23 383 406 383 406 0.94

5 25 0.25 18 5.9 0.8 1 20 446 465 446 467 0.93

6 25 0.014 0.97 9.9 0.1 2 23 480 501 479 501 0.96

7 25 0.044 3.1 8.3 0.7 1 23 576 599 576 599 0.97

8 25 0.059 4.2 7.9 0.4 2 22 608 628 607 628 0.93

9 25 0.36 26 5.4 2.9 1 23 637 660 637 660 0.97

10 25 0.00017 0.012 15.9 1.1 2 23 681 702 680 702 0.97

11 25 0.00028 0.02 15.2 7.3 1 23 710 732 710 732 0.97

12 25 0.027 1.9 8.9 0.6 1 23 870 893 870 893 0.94

13 25 0.41 29 5.2 4.6 2 22 901 921 900 924 0.88

14 25 0.0017 0.12 12.7 1.3 1 23 930 953 930 953 0.96

15 25 4.6e-05 0.0032 17.7 2.9 2 23 972 993 971 993 0.97

16 25 0.00016 0.012 15.9 0.4 1 23 1000 1022 1000 1022 0.98

17 25 0.05 3.6 8.1 0.0 2 21 1049 1068 1048 1069 0.93

18 25 0.0019 0.13 12.6 2.9 1 23 1116 1139 1116 1139 0.96

19 25 0.0034 0.24 11.8 1.0 1 23 1176 1199 1176 1199 0.96

20 25 0.0002 0.014 15.6 1.4 1 23 1225 1248 1225 1248 0.97

21 25 4.8e-06 0.00034 20.7 0.2 2 23 1274 1295 1273 1295 0.95

22 25 0.00021 0.015 15.6 3.5 1 23 1301 1323 1301 1323 0.99

23 25 1.9e-06 0.00013 22.0 2.0 1 23 1329 1351 1329 1351 0.97

24 25 1.7e-07 1.2e-05 25.3 2.4 1 23 1357 1379 1357 1379 0.99

25 25 0.00085 0.061 13.7 0.2 1 22 1385 1406 1385 1409 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0014	0.1	13.0	0.9	1	23	207	229	207	229	0.97
2	25	1.1	77	3.9	3.1	1	21	235	255	235	257	0.84
3	25	0.92	65	4.1	2.6	2	23	289	310	288	310	0.95
4	25	0.0099	0.7	10.3	5.2	1	23	383	406	383	406	0.94
5	25	0.25	18	5.9	0.8	1	20	446	465	446	467	0.93
6	25	0.014	0.97	9.9	0.1	2	23	480	501	479	501	0.96
7	25	0.044	3.1	8.3	0.7	1	23	576	599	576	599	0.97
8	25	0.059	4.2	7.9	0.4	2	22	608	628	607	628	0.93
9	25	0.36	26	5.4	2.9	1	23	637	660	637	660	0.97
10	25	0.00017	0.012	15.9	1.1	2	23	681	702	680	702	0.97
11	25	0.00028	0.02	15.2	7.3	1	23	710	732	710	732	0.97
12	25	0.027	1.9	8.9	0.6	1	23	870	893	870	893	0.94
13	25	0.41	29	5.2	4.6	2	22	901	921	900	924	0.88
14	25	0.0017	0.12	12.7	1.3	1	23	930	953	930	953	0.96
15	25	4.6e-05	0.0032	17.7	2.9	2	23	972	993	971	993	0.97
16	25	0.00016	0.012	15.9	0.4	1	23	1000	1022	1000	1022	0.98
17	25	0.05	3.6	8.1	0.0	2	21	1049	1068	1048	1069	0.93
18	25	0.0019	0.13	12.6	2.9	1	23	1116	1139	1116	1139	0.96
19	25	0.0034	0.24	11.8	1.0	1	23	1176	1199	1176	1199	0.96
20	25	0.0002	0.014	15.6	1.4	1	23	1225	1248	1225	1248	0.97
21	25	4.8e-06	0.00034	20.7	0.2	2	23	1274	1295	1273	1295	0.95
22	25	0.00021	0.015	15.6	3.5	1	23	1301	1323	1301	1323	0.99
23	25	1.9e-06	0.00013	22.0	2.0	1	23	1329	1351	1329	1351	0.97
24	25	1.7e-07	1.2e-05	25.3	2.4	1	23	1357	1379	1357	1379	0.99
25	25	0.00085	0.061	13.7	0.2	1	22	1385	1406	1385	1409	0.91

Sequence Information

Coding Sequence: ATGCTTCCAACGAATATCTGTCGAACCTGTGCTCAGCAAGATGGACGTTTACTGCCCTTATCCACTTGCCTGGAAAAAGACGCCTCCAAAAGTTTCTACGATGTGCTCCAGGAACTTACGCAAATTAATCTCCAGCGAGAGAGCTTGGATGACAATCTTCCACAGCAATTGTGCACCGATTGCTGGACGAGATTGGAGAATGCCCACGCCTTTGTAGAGCAGGCCAGAAAAGTCAATAAGGAGCTGCTGGTTCGCCTGAGGGAGTGTTTGGATGAAATACCCATCGATATTCCTCAGGAGCAGAACATTAAGACAGAGGTAGACCTTGAGGATGATGGCAAGTCAGAGGTGGACATAGGTTCCACAGGATTGGCGGCTTTGGAGCTTAAATGGCAGCCAGAAAGCGCCAGCGAGGAGGAATTCGTTGATGCAGCAGAATCTGATGAGGAACCAGTGGATAAGAAGCCCTATCATTTACGGCGTAGTTCTCGGAAAGTCAAGCAGCCTGTGGAGAGTGAAAATGAGGATGTTAAACCAACAGAACCATCGCCAGTCAAACGCCGAAGAGGACGTCCACCGGGACCGGCCAAAAACCTAACGATGACCAATGATGGCCGCCATGAATGCGGAGTGTGTGGCAAAACCTTCTCATGGTTCCGCGACATGCAGCGTCACGCCAGAATTCACTTCGAGAAGGCCTCATACGTGTGCGATACTTGTGGAAAAGGATTCCTGCGCAAAGACAAGTACATGTTCCACATCCGCTGTCACGAAAAACGAGAGTCCAAATGGAAGGCTTTACAAATGGGAAACGAATGGCGATTTGCCGAGCGTCTGTACAGCTCCGGTAGAATGAAGAGAATCGAGTGCAAGTTGTGCGGATTACATTGCCAGCGACTGGAGGAGCTTAGATTTCATCTAAGAGGTCATGCGGATGTGAAGACCCTAGTCCACTTAAGAAACGATAGTGATGTGGTCAGAGAGCACTTTCCTGATTTGCCTTGCGATTTGGAAATCGTCAAGCAACAGATCTGCGCTGATATCGCCGAAGGAAACACGGAAAAGTTTGCCAGCGTTGTGAATTTCCACGGCTATGAAGTGGGAGTCAGTGATTCCGATGCAGAATGTGACAGCACAGAGGCGAAATATCACTGCTTCGTATGCAACCTCTCCTTCACCCGCAAACATCGCTTAGTGAGGCACACCCTAGAGAATCACTCAGAATCGCCTTCAACGCTTCCCTGGCAGCGGTGTAGTTCCTGTAAAATAGGCTTCCTCTGTTCAACTCTGTACAACCAACATCTAAGCACCCATTGCCACAACAAAGCGAGGCGATATCACTGCCCTAAATGTCCTGGAAAGTTTATGTGGCCGGAAAACCTGCAGAGGCACGCGTGCTCCAATTCGAGAGAAAAAGAGTCTATGACCAAGCAGATATCTTGCTCGCTATGTGATGCCACGCTTCCCAGTTTGGCGCAACTTCGCATTCATCTCACCACCCACCAGCATGATTTAAATGGGATTAGTTCAAAGTACGATTCCTCATTCTTCCAGTCGTTTTATCCGGATGGTTTGACGTGCTCTCCCTCGGATCTGGCTGCTCGTATAGCTGAAGACTTTGAGGTCCAGGACTTTGATCGCTACTACAACGCCTGTACGGGAAGCGGTCAAGAGCTGGATCTATTTGATTCGGAAACGGAGCAGGCCGAAGAGGAGAAACCCACGCACACCTGTCTGTTGTGTGGAGCTGTAGCGAACACATTAACGAGCCTGCTGCAGCACCAAAAGAGCTTCCATTCTGAAGCAACTGAGCTGCCATGTTCATGTGAGGACTGCGCTTCTGGTTTCGTGAGCAAGGCACTTCTTGAACAACACCGAAGACGCATGTGTGCCAAGAAACACTCACGGTTTCACTGTCAGAGTTGCAATCTCCGATTCGTTTGGCAGATCAACTTTGAGCAGCATCTGAAGACATACCATGAAGAAAGGAAAGATGCAGATCAGCTGAGCGGCATGCTCAGTTCTTCGTCCGCAAAGCTGCAGTGTGACGAATGCGAGAAGGTATTCATCTGGCATAAAGATCTCACCCGTCACATGCGATTGCACCAACCTCAATCAGCGGCACAGTTCGACTGTCCGCATTGCCATCGTAAGTTCCACCGAAAGGATGGCCTAAAGTCCCACCTAAAAGTTCATGCTGGAGAGCCAGATCACCTAAATGAGCGGGGTACAACTGCCAATAATGTTCTAGAAATAACTCTGTCAAGACTTAGTCGGCCCCATGGTTGCAAGGTGATTCAATGCATGATCTGCCTTTCCCGGCACTCAAGGATCAGTGATCTGCGCACCCACCTGAGTTCACATCAATACGGATTGAACTTTTCCGAAGAGAGAGATATTCCCAGTGCCTCAAGAGCCTTTTACCCAGAACTTGCAACTTCCTTGAACAGAGATGAACTTGCCGGGAGGATTATGGCTGATGTGGAAATGGAAAGGGATTTGGATCGATTTATTTCCATTACCAACGAGGCTGGCATGGAGCTAAATCTCGACAGCAGCGAAACTGATTCTGAATCCGAGCAGGAGGCGGACTTCTCAGCCAAAACCTATGCCTGCAATCTATGTACCTCGGTGGTGGAAAGAAAACATCAACTGTTTGCTCACCAACTGGAGGAGCACAAGTGGGAGGAGGCGTTCCTTGTTTGTTCCCAATGCCAGGCTAGGTTTGTCAGCGAATCTCTGTTGGAGCATCACTGCAGAACCCTATGCCACAATCCGCAGAAAGTTTTCCAGTGCCGCAAGTGTCCTCTGCGCTTCCGCTGGCGGGAGAACCTGAAGCTTCACATGAACCTGTCCCATCAGCAAACCGAAATCTCAATCCCCGATGAATCCCCTCCGGCACATGGCGATCTTCAGTGCGGCGAGTGTCATCGCAGCTTCAAGATGCAGAAGGATCTCACACGCCACACCCTCATGCACGGCCAGGAGTCGAACATCTACCGATGTCGTTGGTGTGCTCGTCGCTTCTATCGCTGGGCCAATCTTGTACAGCATATCGTTCGCCATGGGATAACTGCCGGCCAATTGCCCTATGCCGAGGCCATTCTGGAGTCCTACGGCAATCCTGGTGGCCAAAAGAAGGTGGAGTGTCGCGTGTGCAGCGTAAGCTTTTCCACCATCGCCGCTCTGCGTCTGCATCTGGAAACCATGCCAGCAGGAAGCCACCACGAGTTCACCTCAAATCAGAACTACTCTATTACCAACCAGATGGGCTACGAGATGGAGCTGAATGATTCGGAGACTGACGATGGCGGTGCTATTAAGCCACCCGGTGCTCCTGCTTCCTATACTTGCGGTATGTGCCAACTGAGGTGCACGCGGAAGTTCGAGCTGCAACAGCACCAGCAGGCCATGCACCGGATGGAGAAGATTCCCGACGGTTGTGATAAGTGCATCTTCAAAAGCGTTTGCCCAGACATAATTGCTCATCATAAGAAAACGCAGTGCGAGAATCGGGAGAAGCAGTTCACCTGCACTCGTTGTGGCTACAAGTTCATGTGGGAGTCCAATCTGCTGCAGCACATGCAGTTGCAGCATGAAAAGTCAGAGGATCATGAGCTGGATGAATCCAAGGAGGCGTCTGGGGACGAACCGAAAGCAGAGAGCCAGGTGTTCCAGTGTGGACTTTGCCCCAAGAAGTACAACCGAAAGGATCGGCTTACGGCGCACGCAAAGAAGTTCCACGGACCGGATGGCAAGGGTCCTAGTTTAGTGAAGGCCTCTAATCGACCGACATCGCCCAAGGAACCAAAGCGATTCCTGTGCGCATTCTGCGGCAAGGCGGTCAGCTCCTCTTCCAACCTGATCATCCACATGCGGCGTCATACCGGCGAAAAGCCTTTCAAGTGTGAATACTGCACGATGGCCTTCCCGCGATCCTCCGACCTCCAGTGCCACCGAAGGACGCACACTGGCGAACGTCCGCATGTGTGCACTGTTTGCCAGAAGGGATTCGCCCGCTCGTACAAACTGCAGCAGCACATGCGCATCCACAGCGGAGAGCGGCCGTACAAGTGCACCTACTGCGAGAAGAGCTTCACGCAGTCCAACGACCTGACCCTCCACATCCGCCGGCACACTGGCGAGCGGCCCTACCAATGCGGCGTCTGCGGAGAGCGTTTTATCCAGGGCACCGCGCTGAAGAACCACCGCATGCAGCAGAGCCACTACGAGGAGGGCCAGGAATCGGCGGAGCCCCCAAGACGAACGGTTCTGGAGCAGTTCTCTATATAA
Protein Sequence: MLPTNICRTCAQQDGRLLPLSTCLEKDASKSFYDVLQELTQINLQRESLDDNLPQQLCTDCWTRLENAHAFVEQARKVNKELLVRLRECLDEIPIDIPQEQNIKTEVDLEDDGKSEVDIGSTGLAALELKWQPESASEEEFVDAAESDEEPVDKKPYHLRRSSRKVKQPVESENEDVKPTEPSPVKRRRGRPPGPAKNLTMTNDGRHECGVCGKTFSWFRDMQRHARIHFEKASYVCDTCGKGFLRKDKYMFHIRCHEKRESKWKALQMGNEWRFAERLYSSGRMKRIECKLCGLHCQRLEELRFHLRGHADVKTLVHLRNDSDVVREHFPDLPCDLEIVKQQICADIAEGNTEKFASVVNFHGYEVGVSDSDAECDSTEAKYHCFVCNLSFTRKHRLVRHTLENHSESPSTLPWQRCSSCKIGFLCSTLYNQHLSTHCHNKARRYHCPKCPGKFMWPENLQRHACSNSREKESMTKQISCSLCDATLPSLAQLRIHLTTHQHDLNGISSKYDSSFFQSFYPDGLTCSPSDLAARIAEDFEVQDFDRYYNACTGSGQELDLFDSETEQAEEEKPTHTCLLCGAVANTLTSLLQHQKSFHSEATELPCSCEDCASGFVSKALLEQHRRRMCAKKHSRFHCQSCNLRFVWQINFEQHLKTYHEERKDADQLSGMLSSSSAKLQCDECEKVFIWHKDLTRHMRLHQPQSAAQFDCPHCHRKFHRKDGLKSHLKVHAGEPDHLNERGTTANNVLEITLSRLSRPHGCKVIQCMICLSRHSRISDLRTHLSSHQYGLNFSEERDIPSASRAFYPELATSLNRDELAGRIMADVEMERDLDRFISITNEAGMELNLDSSETDSESEQEADFSAKTYACNLCTSVVERKHQLFAHQLEEHKWEEAFLVCSQCQARFVSESLLEHHCRTLCHNPQKVFQCRKCPLRFRWRENLKLHMNLSHQQTEISIPDESPPAHGDLQCGECHRSFKMQKDLTRHTLMHGQESNIYRCRWCARRFYRWANLVQHIVRHGITAGQLPYAEAILESYGNPGGQKKVECRVCSVSFSTIAALRLHLETMPAGSHHEFTSNQNYSITNQMGYEMELNDSETDDGGAIKPPGAPASYTCGMCQLRCTRKFELQQHQQAMHRMEKIPDGCDKCIFKSVCPDIIAHHKKTQCENREKQFTCTRCGYKFMWESNLLQHMQLQHEKSEDHELDESKEASGDEPKAESQVFQCGLCPKKYNRKDRLTAHAKKFHGPDGKGPSLVKASNRPTSPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRMQQSHYEEGQESAEPPRRTVLEQFSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548203;
90% Identity: -
80% Identity: -