Basic Information

Insect: Drosophila melanosoma
Gene Symbol: ct
Assembly: GCA_035042045.1
Location: JAWNLY010000176.1:984436-1008353[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 8.8e-27 7.4e-23 80.3 0.0 3 71 800 869 798 875 0.94

2 3 6e-32 5e-28 96.8 0.0 3 77 1283 1358 1281 1360 0.96

3 3 3.6e-31 3e-27 94.3 0.0 3 76 1550 1624 1548 1627 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	8.8e-27	7.4e-23	80.3	3	71	800	869	798	875	0.94
2	3	6e-32	5e-28	96.8	3	77	1283	1358	1281	1360	0.96
3	3	3.6e-31	3e-27	94.3	3	76	1550	1624	1548	1627	0.96

Sequence Information

Coding Sequence: ATGACAACACAAGCAAGGACCTGGATACGAGACGAGGATATGATGCCTTACGAATGTTTGCTAGAGATGTTGATTGGCATTGCGTTGTGTAGGGGGATTAAAGCACTTTTGGATGAGTTGCAACGGCTGCGTGGCCTGGAACAAACTCATCTTGTACAAATCCAAAGGCTCGAAGAGCATTTGGAGGTAAAGAGACAGCACATAATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCACTCAATGCGGCTGCGACCAACAataacactaacaacaacaacaacaacaataacaacaatagcagcagcaacaacaacaacaacaacaatcacagcaACCAGAGTagcgaaaacaacaacgacgagtTGTCAGCGGTATTTAAATCGACAGATCTAACATCATCCACCCATCAGCACATgcacgatgatgacgatgatgatgatgatgatgatgatgataatgataatcaCGCTGAGCTGCGGgatggcgatgatgatgaggaggacACAGATATGGctaacgagcagcagcagcagcagcaattgcagcagcagcaacagttgcagctattgcagcagcaacatgctgCCATTGTCAACAATCGGCACAACGATGATAACGAAAAGGATGATGACGAGGAGCAGGATGCCGATATATCCaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCATTGGATCTAAATGTGCTCAGTCCACATTCAGCTATTGCCACAGCCGCCgcggccgcagcagccgctgccTGCGCCAACGATCCGAACAAATTCCAAGCTTTGCTCCTGGAACGCACCAAAGCTTTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGATGCGGCGAATGCCAGCAATGATGAAATGCCgcaacaacaggcagcagacgcagcaaCTACCGCTAATCAAGTAACTGTAAAAGCAGCTGATGAAGATGAAAatgaacaagaagaagaagaagaagatgaagaatcagcaaaagcagcagccacatccaagtcagaaacaataacaaacgcAATGGAAAAGCCCCAAAATGATCCATTGACCGAGGCCAACTTGCAGCccaaaattgaaatcattgACACAGAAActgatgcggatgcggatgcggatgcggatgctgaTGAGGTTGGCACTGAGAATGCCTCTGGTCAAACACTGGAAGAACAGCTGGTCAATAGTTATTGGAGGCGCGGCTTTGAAACatcaacaccagcagcagcagcagcagcagcagcagcaacgacaacagcagcagcagtagcagccgtagcagcagcagcaacaaccactgGAAGCAAAACGCCAACAATATATCAAAATGCCAATGtggtgcagcagcaattgttgccgccaccgccgccgccgccgccgctgccgtcgtcacaacagcagcagcagcagcagcagcaacagcaacagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacaacaacaacaacaacagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCATTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcaacatcagccacagcaacagcagcaacagcagcagcagcagcagcaactgctccagcagcagcagcagcagcatcatcaccacaacagcagcaatagcagcaacagcagttcaGCGACCGGCAGCGATCCACTGAATCCACTGAatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCAGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCAGCTGGCGGCCACAATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGCAGGCGGCGGCCGCTGCCAATGTGGCAGCCGTTGCCGAGGATAATAACAACAGCCTGACGCCAAATGCGAATGCGGCTGTCGCCGCTGCAGCAATGGCTGCCCATGCACAGCATGCGGCCGCATTGGGTGCACCCGGTTTTCTGCCAAATTTACCCAGCCTACCGGCGTTTCAATTTGCAGCGGCCGCTGCGGCTGGCCAGGATCCACGAGCGCAACATTTTCGATTTGCGGATGCCGAACTGCAGATGCAGCCGGGCGTTTCGATGGCCGGCCGTTTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCACTTGACACACTGCACATCTCGCGACGTGTCCGCGAATTGCTCTCCGTGCACAATATTGGCCAGCGGCTGTttgccaaatatattttgggcCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGATTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCTGAGGATCGCCTTGCGCACATATTGAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCAGTTGCcgcacagcagcaggagcatcAGCGTCGCCATGTCGTCGATGATACGCACAGCAATGAGGATAGCAAATCGCCGCCGCAGAGTTGCAGCTCACCGTTCTACAAGGAGCAGCAGATTAAGCAtttgcagccgcagcagcagcagcagctgcaacatgcCACAGAGCATGCACAGCGCGAACAGCGCGAAGCGGCCGCCGCCGTTGTTGCcgtgcaccagcagcagcagctgcagcagcgggaGCAGCGGGAGCAGCGAGAGGCCGCACAGcgtgagcaacagcagcgcattCGTCACGATGAACTGGGGCCGGACAAGATGGCGCGCCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAAGcttTTTGCTGACACCGTTCTTTGGCGGAGCCGCTGGCATGCCGGGAGCACCCGCCAATCCGTTCCCCGCCGCAATGGCCGCCGACGAGAATATGCGACATGTGCTGGAGCGAGAGATCGccaagctgcaacagcagcaggcacagcaGGCGCAGCAGGCAGCCAGTTTCCCAAACTTCTCCAGTTTGATggcactgcagcagcaggtgctGAACGGTGCGCAGGATCTGTCGCTGGCCAGCAAGGATATCAAATTGAATGGACAGCGCTCCTCGCTCGAGCAGCACagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGATGACAACGATAGGAGCTATCCAGCTCTGTCGCATGCTGCACGCAAATCGGAGGGCGGCAACACACCCGCACCGACCGCACCAACACTAACACAAACGTCGGcgggcagcggcagcaattcGAATGCCGCCAACTCAACAGTTGCCAGCGGACATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCGGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCATTGCAGCGCATGGCATCGATAACCAACTCACTGATCACACAGCCGCCAGTGACGCCGCATCATTCGCAGCCGCAGCGACCCACCAAGGCGGTGTTGCCACCGATCACCCAGCAACAGTTTGACATGTTCAACAATCTGAACACGGAGGACATTGTGAGGCGGGTGAAGGAGGCGCTCTCCCAGTATAGCATCTCGCAGCGTCTGTTTGGTGAATCTGTGCTGGGTCTGTCGCAGGGATCCGTCTCGGATTTGTTGGCTCGCCCCAAGCCATGGCACATGCTCACCCAGAAAGGTCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAGCTGGTGGCCAGCCAGTATAAGATTGCGCCGGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCCCAGGGATTGGCCAGCAAAATGCAGGCAACGCTGCCCATGCAGAAAATGATGAACGAGCTGAAGCTGCAGGAGCCGGGACAGGCGCAGCACATCATGCAACAGATGCAGGCAGCCGCCGCCATGTCGGCAgccatgcaacagcagcagcaggccgCTGCCGCCCAAGCTGCCGCCGTGCAGCAGGCGCAGGCGCAGGCACAGGCTCAGGCACAGGCGAGCCAGCATCAGCAGgcgcagcatcagcagcaacagcatcagcagAATATGCTGCTGACGTCGCCGGGTCTGCCGCCGCAGCACGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCTGGTAATCCAACAGCAGCGGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCCATGATGATGCCGGTGCTGGGCGGTGCACATGCTCCAAATGCAATGCGCAGCCTCCATCAGCATATGTCACCGACGGTCTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATCAAGGAGGCCCTCCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGTCTGTCGCAGGGTTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGCCGTGAGCCGTTCATCCGGATGCAGCTGTGGCTCAGCGATGCCAACAATGTGGAGCGACTGCAGCTGTTGAAGAATGAGCGGCGGGAGGCGAGCAAGCGGCGACGCAGCACCGGTCCCAATCAGCaggacaacagcagcgacacgTCCAGCAATGATACAAATGATTTCTATACGAGCAGCCCGGGACCGGGTTCGGTGGGTTCATCGGTGGGCGGTGCTCCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTGGCCTTCGCACTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCTTGGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTACCACATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTCCAGCAGCGTCTCGTCGAGCTGCACAAGGAACGGATGGGCCTGAGTGGTGCGCCCATTCCCTACCCACCGTActttgcggctgctgcacTGCTTGGTCGCAGCTTGGCCGGCATACCGGGTGCGGCGGCTGCCGCTGgtgcagcggcagcggcggctgctgctgtgggcgCCGCCGGCGGCGATGAGCTGCAGGCACTGAATCAAGCATTCAAGGAGCAGATGAGCGGCTTGGATCTGTCGATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTATCAGGATGAGCTCGAGCTGGACGCAAGCGGCCACAACATGAGCGACAACGAGTCCATCGAGGGCGGCAGCCACGAGCCGGAGCACACACCCATTACCGAATACGAGAAGGCGCTCCAGAAATCCGCACTCGCCtccgctgccgccgctgctgcatATCTGAGCAATGCGGCGCGCAGCTCCCGTCGCAAGCCGGCCGCACCGCAGTGGGTCAATCCTGCTGGTGCCAGCACACCGACAGCACCTGGTGTTGCACCAAACAGCGCTGACATCACCAGCAGCACGGAGCGCATCATTAACGGTGTCTGCGTCATGCAAGGCTCCGATTTCAATCGCGATGAGAGTGACAGCATCAAAGGCGGCGTTGGCGGCGACTCGAATGCAGCCGATGGCGAGCACGATGAGCACGCTCAACTGGAGATTGAGCAGCGCTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAGGAGGACGACGAGGACGAACaaatccagcagcagcagcagcagcaacagcaacagcagcagcaaaagcagcagctggaagATGCAGCGCCCCTCGACACCGATGCGGAGAAGCAGCTCAACGTGATCAACGAGGATAAATTGCGTTTGGTTCGCGTGCGGCGCCTCAGCAGCAATGGCGATGCCGATGAGCATTCCGCGGCTGCTGCACAGCTGGCGGCGACAGCCGGAGCGCCAGTGGCgccggcagcagcatcatGGAACTACTAA
Protein Sequence: MTTQARTWIRDEDMMPYECLLEMLIGIALCRGIKALLDELQRLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAALNAAATNNNTNNNNNNNNNNSSSNNNNNNNHSNQSSENNNDELSAVFKSTDLTSSTHQHMHDDDDDDDDDDDDNDNHAELRDGDDDEEDTDMANEQQQQQQLQQQQQLQLLQQQHAAIVNNRHNDDNEKDDDEEQDADISNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAANASNDEMPQQQAADAATTANQVTVKAADEDENEQEEEEEDEESAKAAATSKSETITNAMEKPQNDPLTEANLQPKIEIIDTETDADADADADADEVGTENASGQTLEEQLVNSYWRRGFETSTPAAAAAAAAATTTAAAVAAVAAAATTTGSKTPTIYQNANVVQQQLLPPPPPPPPLPSSQQQQQQQQQQQQHFSAQQQQQYHQQQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQPQQQQQQQQQQQQLLQQQQQQHHHHNSSNSSNSSSATGSDPLNPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAATIASTLNGNKSLLQQAAAAANVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPGFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKEQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQLQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPSFLLTPFFGGAAGMPGAPANPFPAAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLEQHSGGSSSCSKDGERGDDNDRSYPALSHAARKSEGGNTPAPTAPTLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQAQASQHQQAQHQQQQHQQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGASTPTAPGVAPNSADITSSTERIINGVCVMQGSDFNRDESDSIKGGVGGDSNAADGEHDEHAQLEIEQRFMEPEVRIKQEEDDEDEQIQQQQQQQQQQQQQKQQLEDAAPLDTDAEKQLNVINEDKLRLVRVRRLSSNGDADEHSAAAAQLAATAGAPVAPAAASWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00543641; iTF_00498657; iTF_00498770; iTF_00576962; iTF_00576852; iTF_00501701; iTF_00501591; iTF_00511174; iTF_00511062; iTF_00518342; iTF_00518231; iTF_00595850; iTF_00595738; iTF_00599370; iTF_00599478; iTF_00513356; iTF_00513247; iTF_00500205; iTF_00500094; iTF_00522066; iTF_00521955; iTF_00564441; iTF_00564552; iTF_00619737; iTF_00619628; iTF_00535100; iTF_00535211; iTF_00499485; iTF_00499376; iTF_00532158; iTF_00532268; iTF_00548702; iTF_00548592; iTF_00525024; iTF_00524913;
90% Identity: iTF_00552095;
80% Identity: iTF_00543641;