Basic Information

Insect: Drosophila demipolita
Gene Symbol: ct
Assembly: GCA_035042405.1
Location: JAWNLI010000488.1:3005624-3022262[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 8.5e-27 7.3e-23 80.3 0.0 3 71 711 780 709 786 0.94

2 3 5.7e-32 4.9e-28 96.9 0.0 3 77 1195 1270 1193 1272 0.96

3 3 3.4e-31 2.9e-27 94.4 0.0 3 76 1491 1565 1489 1568 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	8.5e-27	7.3e-23	80.3	3	71	711	780	709	786	0.94
2	3	5.7e-32	4.9e-28	96.9	3	77	1195	1270	1193	1272	0.96
3	3	3.4e-31	2.9e-27	94.4	3	76	1491	1565	1489	1568	0.96

Sequence Information

Coding Sequence: ATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCGCTTGCCGAGGCAACTGCATTGGCTGCCGCACTCAATGCGGCTgcgaccaacaacaacaacaacaacaacaacagcagcagcaacaacaacaatcacagcaACCAGAGCAGCGAAAACAACAATGACGAGTTGACAACAGATCTGACATCATCCACCCATCAGCACATgaacgatgatgacgatgatgatgacgatgacaatgataatgataacGATAATGATAATCACGCTGAGCAGCTGCGGGAtggcaatgatgatgatgaggaggacACAAATATGGCTaacgaacagcagcagcagcagcagctgcagctgcagcagttgcagcagcaacatgccgCCATTGCCAACAATCGGCACAACGATGATAACGAAAAGGACGATGACGAGGAGCAGGATGCCGATCTATCcaatgccacagccacagcggACGGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGTCCACATTCAGCTATTGCCACAGCCGCCGCGgccgcagcagccgctgccTGCGCCAACGATCCGAACAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCTTTGGCCGCTGAGGCGCTCAAGAATGGCGCCAGCGATGCGGCGAATGCCAGCAGTGATGAAATgccgcaacaacaagcagcaggcgcagcaaCTACCGCTAATCAAGTAACAGTAACACCAGCTGATGGAgctgaagatgaagatgaagatgaaaatgaagaagaagaagaagaagaagcagaagaagaagcagcagcagccacagccaagccagaaacaataataaacgcAATGGAAAAGCCCGAAAATGATCCAATGACCGAGGCCAACTTGCAGCCCAAAATTGAGATCGTTGACACAGAAACTGATGCTGATCCTGATCCTGATCctgatgcagatgcagatgcagatgagGGCGGCACTGAGATTGCCTCTGGTCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGACGCGGCTTTGAAAcatcaacaccagcagcagcaacgacaacagcaacagcagcaacagcagcagcagcagcagcagcagcagcagcagcagcagtagcagcaacaaccactgGAAGCAAAACGCcaacaatttatcaaaatgcCAATGTggtgcagcaacaactgttgccgccaccgccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcacttttctgcacagcaacaacaacaatatcaccaacagcaacaacaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCATTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAgcccaccaccaacaccaacagcagcatcagacacagcagcagcagcagctactccagcagcagcagcatcatcaccacaacagcagcaatagcagcaacagcagttcaGCGGCCGGCAGCGATCCACTGaatccacatcatcatcatgcgCACCACCATGGCCATCCACATGGGCagctgttgcatgcagcacATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGCACACCCAACAGCACCGCCCATCTGGCGGCCACAATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAGGCAGCGGCCGCTGCCAATGTGGCAGCCGTTGCCGAGGATAATAACAACAGTTTGACGCCAAATGCGAATGCGGCTGTGGCCGCTGCAGCAATGGCTGCCCATGCACAGCATGCGGCCGCTTTGGGTGCACCCGGTTTTCTGCCAAATTTGCCCAGCCTGCCGGCGTTTCAATTTGCAGCGGCCGCTGCGGCTGGCCAGGATCCACGAGCGCAACATTTTCGGTTTGCGGATGCCGAACTGCAGATGCAGCCGGGCGTTTCGATGGCCGGCCGATTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGTTGCGCTACAACATGGACAAGTATGCCAATCAGGCACTTGACACGCTACACATCTCCCGGCGCGTCCGCGAATTGCTCTCCGTGCACAATATTGGCCAGCGGCTGTttgccaaatatattttgggaCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGattcGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCTGAGGATCGCCTCGCGCACATACTGAGCGAGGCCTCGTCCCTGATGAAGAGCagcgccgtcgccgtcgcccagcagcaggagcatcAGCGTCGCCATGTCGTCGATGATACGCACAGCAATGAGGATAGCAAATCGCCGCCGCAGAGCTGCAGCTCCCCGTTCTACAAGGAGCAGCAGATTAAGCAtttgcagccgcagcagcagcagcagctgcagcatgcCACAGAGCATGCACAGCGCGAACAGCGCGAGGCGGCCGCCGCCGTTGTTGCcgtgcaccagcagcagcagcagcagcagcgggagcagcGGGAGCAGCGAGAGGCCGCACAGCgtgagcaacagcagcgcattCGCCACGATGAACTGGGGCCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAGGcttTTTGTTGACACCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCGTTTCCTACATCGATGGCCGCCGACGAGAATATGCGGCATGTGCTGGAACGGGAGATCGccaagctgcaacagcagcaggcacagcagGCGCAGCAGGCAGCCAGTTTCCCAAACTTCTCCAGTTTGAtggcactgcagcagcaggtgctGAACGGTGCACAGGATCTGTCGCTGGCCGGCAAGGACATCAAGTTGAATGGACAGCGATCATCGCTCGAGCAGCACagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGATGACAACGATAGGAGCTATCCAGCCCTGTCGCATGCTGCACGCAAATCGGAGGGCGGCAACACACCCGCACCCCCCGCACCAACACTAACACAAACGTCGGcgggcagcggcagcaactcGAATGCCGCCAACTCAACAGTTGCCAGCGGACATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCAATACTGCCGCCGGCGCTGAGCAATCAGGGCGAGGAGTTTGCGGCGACGGCGAGTCCATTGCAGCGCATGGCATCGATAACCAACTCACTGATCACACAGCCGCCAGTGACGCCGCATCATTCGCAGCCGCAGCGACCCACCAAGGCGGTGCTGCCACCGATCACCCAGCAACAGTTCGACATGTTCAACAATCTGAACACGGAGGACATTGTGAGGCGGGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTCTGTTTGGTGAGTCTGTGCTGGGGCTGTCACAGGGTTCCGTTTCCGATTTGTTGGCTCGCCCCAAGCCATGGCACATGCTCACCCAGAAAGGTCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAGCTGGTTGCCAGCCAGTATAAGATTGCGCCGGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCCCAGGGATTGGCCAGCAAAATGCAGGCAACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGGGCAGGCGCAGCACATCATGCAACAGATGCAGGCAGCCGCCGCCATGTCGGCAgccatgcaacagcagcagcaggccgCTGCCGCCCAAGCTGCCGCCGTGCAGCAGGCGCAGGCacaggcccaggcccaggcccaggcgagccagcatcagcaggcgcagcatcagcagcaacagcatcagcaggtgcatcagcatcagcaggcgcagcagcaggcacaggcacaggcgcAGGCacaggcccaggcccaggcaCAGTTGTTGCATCATCAGAATATGCTGCTGACGTCGCCGGGTCTGCCGCCGCAGCATGCAATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCGGCTGCTGGTAATCCAACGGCAGCGGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCGATGATGATGCCGGTGCTGGGCGGTGCACATGCTCCAAATGCAATGCGCAGTCTGCATCAGCATATGTCACCGACGGTCTACGAGATGGCCGCACTCACCCAAGATCTGGACACGCACGATATAACAACGAAAATCAAGGAGGCgctgctggccaacaacaTTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGACTATCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGCCGTGAGCCGTTCATCCGGATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAgcgactgcagctgctgaagAACGAGCGGCGGGAGGCGAGCAAGCGGCGACGCAGCACTGGTCCCAACCAGCaggacaacagcagcgacacgTCCAGCAATGATACGAATGATTTCTATACGAGCAGCCCGGGACCGGGTTCGGTGGGTTCGTCGGTGGGCGGTGCCCCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTGGCCTTTGCCCTCGATCCGTATCCGAATGTTGGCACCATTGAGTTTCTGGCCAACGAGCTAAGCCTGGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTGCCACATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTCCAGCAGCGTCTCGTCGAGCTGCACAAGGAACGCATGGGCTTGAGTGGTGCGCCCATTCCCTACCCACCGTACTTTGCGGCCGCTGCACTGCTCGGACGCAGCTTGGCCGGCATACCGggtgcggcggctgctgccggagcagcggcagcggcggctgctgctgtgggcGCCGCCGGCGGCGATGAGCTGCAGGCACTGAATCAAGCATTCAAGGAGCAGATGAGCGGCTTGGATCTGTCGATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTATCAGGATGAGCTCGAGCTGGACGCAAGCGGACACAACATGAGCGACAACGAGTCCATCGAGGGCGGCAGCCACGAGCCGGAGCACACGCCCATAACCGAGTACGAGAAGGCGCTGCAGAAATCCGCGCTCGCCTCCGCAGCGGCCGCTGCTGCATATCTGAGCAATGCGGCGCGCAGTTCACGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCTGGTGCCAGCACACCGACGGCGGCTGGTGTTGCACCAAACAGCGccgacatcagcagcagcacggaGCGCATCATCAACGGCGTCTGCGTCATGCAAGGCTCCGACTTCAGTCGCGATGAGAGTGACAGCATCAAGGGCGGCGTTGGCGGCGACTCCAATGCTGCCGATGCCGAGCACGATGAACACGCTCAACTGGAGATTGAGCAGCGCTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAGGAGGACGACGAGGACGAACaaatccagcagcagcagcagcagcaaaagcagcagctggaagACGCGGCGGCGCCCCTCGACAGCGATGCGGAGAAGCAGCTCAACGTGATCAACGAGGACAAATTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGCAATGGCGAGGCCGATGAGCACTCCACCACGGCTGCACAGCTGGCGGCGACAGCCGGTGCGCCAGTGGCgccggcagcagcatcatGGAACTACTAA
Protein Sequence: MRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNSSSNNNNHSNQSSENNNDELTTDLTSSTHQHMNDDDDDDDDDNDNDNDNDNHAEQLRDGNDDDEEDTNMANEQQQQQQLQLQQLQQQHAAIANNRHNDDNEKDDDEEQDADLSNATATADGNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAANASSDEMPQQQAAGAATTANQVTVTPADGAEDEDEDENEEEEEEEAEEEAAAATAKPETIINAMEKPENDPMTEANLQPKIEIVDTETDADPDPDPDADADADEGGTEIASGQTLEEQLVNSYWRRGFETSTPAAATTTATAATAAAAAAAAAAAAVAATTTGSKTPTIYQNANVVQQQLLPPPPPPPLPPSQQQQQQQHFSAQQQQQYHQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAAAHHQHQQQHQTQQQQQLLQQQQHHHHNSSNSSNSSSAAGSDPLNPHHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAHLAATIASTLNGNKSLLQAAAAANVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPGFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAVAQQQEHQRRHVVDDTHSNEDSKSPPQSCSSPFYKEQQIKHLQPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQQQREQREQREAAQREQQQRIRHDELGPDKMARLYQELMTRTPREAAFPGFLLTPFFGGAAGMPGAPANPFPTSMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLEQHSGGSSSCSKDGERGDDNDRSYPALSHAARKSEGGNTPAPPAPTLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQAQASQHQQAQHQQQQHQQVHQHQQAQQQAQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSAAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGASTPTAAGVAPNSADISSSTERIINGVCVMQGSDFSRDESDSIKGGVGGDSNAADAEHDEHAQLEIEQRFMEPEVRIKQEEDDEDEQIQQQQQQQKQQLEDAAAPLDSDAEKQLNVINEDKLRLVRVRRLSSNGEADEHSTTAAQLAATAGAPVAPAAASWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00543530;
90% Identity: iTF_00500094;
80% Identity: iTF_00498770;