Basic Information

Insect: Drosophila stalkeri
Gene Symbol: ct
Assembly: GCA_035047405.1
Location: JAWNPR010000061.1:12536123-12551165[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.9e-27 4.6e-23 81.1 0.0 3 72 442 512 440 517 0.95

2 3 4.8e-32 4.5e-28 97.1 0.0 3 77 956 1031 954 1033 0.96

3 3 2.9e-31 2.8e-27 94.6 0.0 3 76 1227 1301 1225 1304 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.9e-27	4.6e-23	81.1	3	72	442	512	440	517	0.95
2	3	4.8e-32	4.5e-28	97.1	3	77	956	1031	954	1033	0.96
3	3	2.9e-31	2.8e-27	94.6	3	76	1227	1301	1225	1304	0.96

Sequence Information

Coding Sequence: atgccgcaacaacaacaacaagccgtAGAcgtagcaacaacagttgtAGAAGAagatgcaacagcagcagcagcagcagcagcagcagcagtagcagcagcagcagcagcgccagcttTGCATAAAACTGGCGCGAAAGAGCTTGAGACATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATCTTAGACACAGACGAGGTAATTGCcgaggcaacagcagctccagcCCAAACGTTAGAGGAACAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAAcgagcacagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcaacaacagcagcaacagctgcagctgcaactgcaactgcaactgggaGCAAAACGCCAACAATTTATCAAAATGCCAATGtggtgcagcagcaattgttgcccccaccgccaccgccacagccacagcagcaacaacaacaacaacaacaacaacactatcagcaacaacaacaacaacaacagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGTCACACACCatcagctccagcagcagcaacagcagcagcagcagcagcagcaacagccacagctgcaacagcagcagcagcagcaacaacttctgcacaacagcagcaatagcagcaacagcagcttaaCCGGCAGCGATCCGTTGAATCATCACCATCACGCACATCATCATGGCCATGGGCATGGCCAACTGTTGCATACGGCTCACCATTTGCATCATGGCGCCGATTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACAGCCCAGCTGGCGGCAAGCATTGCCAGTACGCTGAACGGCAACAAGTCGCTGTTGCAGGCAGCGGCCGCTGCCAATGTggctgctgccgccgttgccgttgctgaggacaacaacaacagtctgACACCCAATGCGAACGCGGCTGTGGCCGCAGCAGCGATGGCTGCCCATGCCCAGCATGCTGCCGCCCTGGGTGCGCCCAGTTTTCTGCCCAATTTGCCCAGCCTGCCCTTCCAGTTTGCGGCTGCCGCAGCTGCCGGCCAGGAGGCGCGTGCGCATTTTCGTTTCGCCGATGCtgagctgcaactgcagccggGCGTTTCGATGGCCGGTCGTTTGGGTGAGTCACTGATACCCAAAGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCACTCGACACACTACACATCTCGCGTCGCGTGCGCGAGCTGCTCTCCGTTCACAACATTGGGCAGCGTCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCTCTCATACCCAAGAAAGATTCTGGACTGCCTCAGTATGCTGGCCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGTCTTGCGCATATACTCAGCGAAGCCTCCTCCCTGATGAAGAGCAACGTGGTcgctgcccagcagcagcagcaacagcagcaacagcagcagcagcaggagcatcAACGTCGTCATGCCAGCGACGATACGCATAGCAATGATGATAGCAAATCGCCGCCACAGAGCTGCAGCTCACCCTTCTTCAAGGTGGAGCATCAgattaagcagcagcaacagcagcagcaacagcaacagcagcagcagcagcagcagcaacaggcacagcagcaacagctgcacgTTGCCGATCATGCACAGCGCGAGCAACGTgaagcagctgccgctgctgccgccgttgccgtccatcagcagcagcgcgaGCAGCGCGAACAGCGTGAGGCTGTGCAGcgtgagcaacagcagcgtctGCGTCACGAGGATCTTGCCCAGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGGCGCGTACGCCACGCGAAGCAGCCTTTCCCAGCTTTTTGCTGTCGCCGTTCTTTAGCGGTGCTGCGGGCATGCCTGGTGCAGCGGCCAATCCATTCCCTGCTGCCATGGCCGCCGATGAGAATATGCGTCATGCCTTTGAGCGTGAGATTGtaaagctgcaacagcagcagcaacagcagcagcagcagcaacagcaacagcagcaacagcaacaggctgCCAATTTTCCCAACTTTTCCAGTTTGATGGcattgcagcagcaggtgtTGAATGGCGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTGAATGGACAACGTTCGTCGCACGAACAGctcagcggcagcggcagcagctccaAGGATGGTGAACGTGGCGATGATGGCATTGCCGATCGCAGTTTTCCCGCCCTGCCACATGCACGCAAATCGGATGGTGGCAACACGCCCGCACCAACCGCAACGCCAGCGCTCAATGCTGCCGGTGGCAGTGGCACAAATCCCATTGCTGGCGTCAGCGTTGCCAGCGCCGGTCATGGCAGCAATTCGGCTGCGCCAAGTCCATTGAGCAACTCCATATTGCCGCCAGCGCTGAGCAGCCAGGGTGAGGAGTTTGCTGCCACGGCGAGTCCATTGCAACGCATGGCCTCCATTACCAATTCACTGATCACACAGCCACCGGTCACACCGCATCACTCGCAGCCCCAGCGACCCACGAAGGCGGTGCTGCCGCCCATCACACAGCAACAGTTCGACATGTTCAACAATCTGAACACAGAGGATATTGTGCGTCGTGTTAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGATTGTTTGGTGAGTCTGTGCTGGGTCTGTCACAGGGCTCCGTCTCCGATTTGCTGGCTCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGTGAGCCGTTCATACGCATGAAAATGTTTCTGGAGGATGAGAATGCGGTGCACAAGCTGGTGGCCAGCCAGTATAAGATTGCGCCCGAGAAACTGATGCGCACGGGCAGCTACAGTGGCAGCCCCCAGATGCCCCAGGGACTGGCCAATAAGATGCAAGCGACGCTGCCGATGCAAAAGATGATGAACGAACTGAAGTTACAGGAGCCGGCACAGGCACAGCATATTATGCAACAGATGCAGGCAGCGGCTGCCATGTCAGCGgccatgcaacagcaacaggcagcGGCCGCTCAAGCAGCTGCCGTGCAacaggcccaggcccaggcccaggcccaagCCCAGGCACAGCAGAGCCATCAGCAGCAGGCACAGCAGCAGGCCCAGCAACAGGCCCAACAGCTGCTCCATCatcagaatatgctattgacATCGCCGGGTTTGCCGCCACAGCATGCCATTAGCCTGCCAGCGGCGAGCACGCCCAGCGGACCGGCGGGCGTTAATcccgctgccattgccacgCCCGGCAGCAATGAGAAGAAGCCAATGCTGATGCCCGTGCATGGTGGAGCACATGCACCGAATGCCATGCGCAGCCTGCATCAGCATATGTCGCCGACTGTCTATGAGATGGCCGCATTGACTCAGGATCTGGATACGCACGATATAACCACCAAGATTAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGTTGGGCCTGTCGCAGGGCTCCGTTTCGGAGCTGTTGAGCAAACCGAAACCATGGCACATGCTCTCCATCAAGGGACGTGAACCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGGCTGCAGTTGCTCAAGAATGAGCGTCGTGAGGCGAGCAAGCGTCGCCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACAAACGATTTCTATACGAGCAGCCCGGGTCCCGGTTCGGTGGGTTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAACAGCGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCGTTGCGTCTGGCCTTTGCACTCGATCCGTATCCAAATGTGGGCACCATCGAATTCCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAATTGGTTCCACAATCATCGCATGCGGCTCAAGCAACAGGTGCCGCATGGCCAGCCCGGCCAGGATAATCCCATACCCAGTCGCGAGAACACCAATGCCACACCCTTCGATCCCGTCCAGTTTCGCatactgctgcagcagcgtctCGTCGAGCTGCACAAGGAGCGCATGGGCTTGAGCGGTGCGCCGATACCTTACCCACCGTACTTTGCCGCCGCCGCACTGCTCGGCCGCAGCTTGGCGGGCATTCCAGGCGCTGCGGCGGCAGCTggtgcagcggctgctgcggccgcTGCCGTCGGTGCCGCTGGCGGCGATGAGCTGCAGGCACTCAATCAGGCCTTCAAGGAGCAGATGAGCGGATTGGATCTATCTATGCCGACACTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTAGAGCTGGATGCCAGCGGACATAATATGAGCGATAACGAGTCCATCGAGGGTGGCCATGAGCCGGAGAATACCACGCCCATATCCGAATACGAGAAGGCGCTGCAAAAGTCGGCGCTCGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCACGCCGCAAACCCGCCGCCCCACAATGGGTGAATCCGGCTGGGGCCAGTACGCCCACAGCGGCTGGTGCTGCCATCGCTGCTGGCGATAATGGCAGCAGCGAGCGCATCATCAATGGCGTCTGCATCATGCAGGCCTCCGACTATGGACGTGATGAGGGCGACAGTGTCAAGGGTGGCGACTCCAATGCGGATGCCGAGCATGATGAGCATGCGCATCTGGAGATTGAGCAGCGCTTCATGGAGCCAGAGGTGCGCATCAAGCAGGAGgaggatgacgatgatgagcagaacgcgcagcagcagcagcaacagcagcagcagcagcagcagcacctggACGATGAGAGCACCGAGAAGCAGCTGAAGGTGATCAATGAGGAGAAACTGCGCATGGTGCGTGTGCGACGACTCAGCAGCAATGGCGATGCCGATGAGCATTGCGCTGCAGTGCAGCAGgcgacggcagcggcagcggcagcagcagcagcagccgcagcagcagctgtagcagcggcagcaactgcaacgccagcagcagcggcagcagcagcagcatggaACTACTAA
Protein Sequence: MPQQQQQAVDVATTVVEEDATAAAAAAAAAVAAAAAAPALHKTGAKELETLAEANLQPKIEILDTDEVIAEATAAPAQTLEEQLVNSYWRRGFETSTAAAAAAAAAATTTTATTAATAAAATATATGSKTPTIYQNANVVQQQLLPPPPPPQPQQQQQQQQQQHYQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAVTHHQLQQQQQQQQQQQQQPQLQQQQQQQQLLHNSSNSSNSSLTGSDPLNHHHHAHHHGHGHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFFKVEHQIKQQQQQQQQQQQQQQQQQQAQQQQLHVADHAQREQREAAAAAAAVAVHQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQQQQQQQQQQAANFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSHEQLSGSGSSSKDGERGDDGIADRSFPALPHARKSDGGNTPAPTATPALNAAGGSGTNPIAGVSVASAGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQAQAQQSHQQQAQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGPAGVNPAAIATPGSNEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPTAAGAAIAAGDNGSSERIINGVCIMQASDYGRDEGDSVKGGDSNADAEHDEHAHLEIEQRFMEPEVRIKQEEDDDDEQNAQQQQQQQQQQQQHLDDESTEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAVQQATAAAAAAAAAAAAAAVAAAATATPAAAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00543530;
90% Identity: iTF_00493543;
80% Identity: iTF_00599478;