Basic Information

Gene Symbol
ct
Assembly
GCA_035042365.1
Location
JAWNLJ010000443.1:14680383-14696730[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.2e-27 7.2e-23 80.4 0.0 3 71 682 751 680 757 0.94
2 3 5.5e-32 4.9e-28 96.9 0.0 3 77 1165 1240 1163 1242 0.96
3 3 3.3e-31 2.9e-27 94.5 0.0 3 76 1427 1501 1425 1504 0.96

Sequence Information

Coding Sequence
ATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATAAATGAGGCACTTGCCGAGGCAACTGCATTGGCTGCCGCACTCAATGCGGCTGctacaaacaataacaacaacaacaacaacaacaacagcagcagcaacaacaacaacaacaacaacaatcacagcaGCGAAAACAACAATGATGAGTTGACAACAGATCTAACATCATCCGCCCATCAGCACATgaacgatgatgacgacgatgatgatgatgatgataatgataatcaCGCTGAGCTGCGGGATgtcaatgatgatgatgaggaggacACGGATATGGCCaacgaacagcagcagttgcaactgcagcagcaacatgctGCCCTTGCCAACAATCGGCACAACGATGATAACGAAAAGGACGATGACGAGGAGCAGGATGCGGATCTATCCaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAACAGCACAGTCCACTGGATCTGAATGTGCTCAGTCCACATTCAGCAATTGCCACAGCCGCCGCGgccgcagcagccgctgccTGCGCCAACGATCCGAACAAATTTCAAGCTCTGCTCCTGGAACGCACCAAAGCTTTGGCCGCTGAGGCGCTCAAGAATGGCGCCAGCGATGCGGCGAATGCCAGCAGTGATGAAatgccgcaacaacaacaagcagcagacGCAGCAACTACCGCTAATCAAGTAACAGTAACACCAGCTGATGGAGCTGAACAAGAAGATGAAaatgatgaagaagaagaagcagcagtcACATCCAAAccagaaacaataaaaaacccAATGGAAAAGCCCGAAAATGATGCAATGACCGAGGCCAACTTGCAGCCCAAAATTGAGATCATTGACACAGAAACTGATGCTGATCCCGATCCTGATGAGGTCGGCACTGAGTGTGCCTCGGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGCGGCTTTGAAAcatcaacaccagcagcagcagcagcaacgacaacagcaacagcagcagcagcaacaaccactgGAAGCAAAACGCCaacaatttatcaaaatgcCAATgtggtgcagcagcaactgttgccgccaccgccgccgccgccgctgccgccgtcacaacagcagcagcagcagcagcagcacttttctgcacagcaacaacaacaacaatatcaccaacagcaacaacaacaacaacaacaacaacagcagcagcaacatggaCCCTCGTCCACAGTGCTACTCAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCATTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAtcccaccaccaacaccagcagcatcagacacagcagcagcagcagcagcaacagcagctgctccagcagcagcagcagcatcatcaccacaacagcagcaatagcagcaacagcagttcaGCGGCCGGCAGCGATCCACTGAATCCGCTGAATCATCATCATGCGCACCACCATGGCCATCCACATGGACAGCTGTTGCATGCCGCACATCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAATAGTACACCCAACAGCACCGCCCAGCTGGCGGCCACAATTGCCAGCACGCTGAATGGCAACAAGTCACTGTTGCAAGCAGCGGCCGCTGCCAATGTGGCAGCCGTTGCGGAGGATAATAACAACAGCCTGACGCCAAATGCGAAtgcggctgtggctgctgcagcaatgGCTGCCCATGCACAGCATGCGGCCGCATTGGGTGCACCCGGTTTTCTGCCAAATTTGCCCAGCCTTCCGGCGTTTCAATTTGCAGCGGCCGCTGCGGCTGGCCAGGATCCGCGGGCGCAACATTTTCGCTTTGCGGATGCCGAACTGCAGATGCAGCCGGGCGTTTCGATGGCCGGCCGTTTGGGTGAATCGCTAATACCCAAAGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCACTGGACACACTGCACATCTCCCGGCGCGTCCGCGAATTGCTCTCCGTGCACAATATTGGCCAGCGGCTGtttgccaaatatatattgggCCTGTCGCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTAACCGAGAAGGGTCGGGACAGTTACCGCAAGATGCACGCCTGGGCCTGTGATGATAGTGCCGTCATGCTCCTCAAGTCCCTCATCCCCAAGAAAGatTCGGGATTGCCACAGTATGCTGGTCGCGGCGCTGGTGGCGATGATTCCATGTCTGAGGACCGCCTCGCGCACATACTCAGCGAGGCCTCGTCCCTGATGAAGAGCAGCGCCGTCGCCgcccagcagcaggagcatcAGCGTCGCCATGCCGTCGATGATACGCACAGCAATGAGGATAGCAAATCGCCGCCGCAGAGTTGCAGTTCGCCGTTCTACAAGGATCAGCAGATTAAGCATttgccgccgcagcagcaacagcagctgcaacatgcCACAGAGCATGCACAACGCGAACAGCGGGAAGCGGCCGCCGCCGTTGTGGCcgtgcaccagcagcagcagcagcagcagcgggagcaGCGGGAGCAGCGAGAGGCCGCACAGCgtgagcaacagcagcggatTCGCCACGATGATCTGGGGCCGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGACGCGCACTCCACGCGAAGCAGCCTTCCCAGGcttTTTGTTAACACCGTTCTTTGGCGGAGCCGCTGGCATGCCTGGAGCACCCGCCAATCCGTTTCCCACAGCGATGGCCGCCGACGAGAATATGCGACATGTGCTGGAACGGGAGATTGccaagctgcaacagcagcaggcacagcaGGCGCAGCAGGCAGCCAGTTTCCCAAACTTCTCCAGTTTGATGGCACTGCAACAGCAGGTGCTGAACGGTGCACAGGATCTGTCGCTGGCCAGCAAGGATATCAAGTTGAATGGACAGCGCTCCTCGCTGGAGCAGCACagtggcggcagcagcagctgctccaagGATGGCGAACGTGGCGATGACAACGATAGAAGCTATCCAGCTCTGTCGCATGCTGCACGCAAATCGGAGGGCGGCAACACACCCGCACCCCCCGCACCAACACTAACACAAACGTCGGcgggcagcggcagcaattcGAATGCCGCCAACTCAACTGTGGCCAGTGGACATGGCAGCAACTCGGCGGCACCCAGTCCGCTGAGCAACTCCATATTGCCGCCGGCGCTGAGCAATCAGGGTGAGGAGTTTGCGGCGACGGCGAGTCCATTGCAGCGCATGGCATCGATAACCAACTCACTGATCACACAGCCGCCAGTGACGCCGCATCATTCGCAGCCGCAGCGACCCACCAAGGCGGTGCTGCCACCGATCACCCAGCAACAGTTTGACATGTTCAACAATCTGAACACGGAGGACATTGTGCGGCGGGTGAAGGAGGCACTCTCCCAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCTGTGTTGGGGCTGTCGCAGGGATCCGTTTCCGATTTGTTGGCCCGCCCCAAGCCGTGGCACATGCTCACCCAGAAAGGTCGCGAGCCGTTCATACGCATGAAGATGTTCCTCGAGGATGACAATGCGGTGCACAAGCTGGTTGCCAGCCAGTATAAGATTGCGCCGGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCCCAGGGATTGGCCAGCAAAATGCAGGCAACGCTGCCCATGCAAAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGGGCAGGCGCAGCACATCATGCAACAGATGCAGGCAGCCGCCGCCATGTCGGCAgccatgcaacagcagcagcaggccgCTGCCGCCCAAGCTGCCGCCGTGCAGCAGGCGCAGGCACAGGCCCAGGCTCAGGCCCAGGCGAGCCAGCATCAGCAGGCGCAGCACCAGCAGAATATGCTGCTGACGTCGCCGGGTCTGCCGCCGCAGCATGCGATCAGTCTGCCGGCAGCGGTCACGCCTAGTGGCATCCAATCCAATGCTGGTAATCCAACAGCAGCGGGCAGCACGCCGGGCAGCAACGAGAAGAAGCCCATGATGATGCCGGTGCTGGGCGGTGCACATGCTCCAAATGCAATGCGCAGCCTGCATCAGCACATGTCGCCGACGGTCTACGAGATGGCCGCACTCACCCAGGATCTGGACACGCACGATATAACAACGAAAATCAAGGAGGCGCTGCTGGCCAACAATATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTCGGATTATCGCAGGGCTCCGTCTCGGAGCTGCTCAGCAAACCGAAGCCGTGGCACATGCTCTCGATCAAGGGCCGTGAGCCGTTCATCCGGATGCAGCTGTGGCTGAGCGATGCCAACAATGTGGAgcgactgcagctgctgaagAACGAGCGGCGGGAGGCGAGCAAGCGGCGACGCAGCACTGGTCCCAACCAGCaggacaacagcagcgacaccTCCAGCAATGATACAAATGATTTCTATACGAGCAGCCCGGGACCGGGTTCCGTGGGTTCATCGGTGGGCGGTGCTCCGCCCAGCAAGAAGCAGCGTGTCCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTTTGGCCTTTGCCCTCGATCCGTATCCAAATGTTGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCCTGGCGACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTCAAGCAGCAGGTGCCACATGGCCAGCCAGGCCAGGACAATCCCATACCCAGTCGTGAGAACACAAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTCCAGCAGCGTCTCGTCGAGCTGCACAAGGAACGCATGGGCCTGAGTGGTGCGCCCATTCCCTACCCACCGTACTTTGCCGCTGCAGCACTGCTCGGACGCAGCCTGGCCGGCATACCGggtgcggcggctgctgccggagcagcggcagcggcggctgctgctgtgggcGCCGCCGGCGGCGATGAGCTGCAGGCACTGAATCAAGCATTCAAGGAGCAGATGAGCGGCTTGGATCTGTCGATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGACACAATATGAGCGATAACGAGTCCATCGAGGGCGGCAGCCACGAGCCGGAGCACACGCCCATAACCGAGTACGAGAAGGCGCTGCAGAAATCCGCCCTTGCCtccgctgccgccgctgctgcatATCTGAGCAATGCGGCGCGCAGTTCCCGTCGCAAGCCGGCGGCACCACAGTGGGTCAATCCGGCTGGTGCCGGCACACCGACGGCGGCTGGTGTTGCCCCAAACAGCGCtgacatcagcagcagcacggaGCGCATCATCAACGGCGTCTGTGTCATGCAAGGCGGCTCCGATTTCAATCGCGATGAGAGTGACAGCATCAAAGGTGGCGACTCCAATGCTGCCGATGCGGAGCAGGATGAGCACGCTCAGCTGGAGATTGAGCAGCGCTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAGGAGGACGACGAGGACGAAcaactccagcagcagcagcagcagcaaaagcagcagctggaaGATGCAGCGCCTCTCGACAGCGATGCGGAGAAGCAGCTGAGCAACGTGATCAACGAGGACAAATTGCGTTTGGTGCGCGTGCGGCGCCTCAGCAGCAATGGGGATGCCGAGGAGCACTCCACGGCGGCTGCACAGCTGGCGGCGACAGCCGGTGCGCCAGTGGCGCCGGCAGCAGCCTCATGGAACTACTAA
Protein Sequence
MRLEARLDKQQINEALAEATALAAALNAAATNNNNNNNNNNSSSNNNNNNNNHSSENNNDELTTDLTSSAHQHMNDDDDDDDDDDNDNHAELRDVNDDDEEDTDMANEQQQLQLQQQHAALANNRHNDDNEKDDDEEQDADLSNATATADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAANASSDEMPQQQQAADAATTANQVTVTPADGAEQEDENDEEEEAAVTSKPETIKNPMEKPENDAMTEANLQPKIEIIDTETDADPDPDEVGTECASGQTLEEQLVNSYWRRGFETSTPAAAAATTTATAAAATTTGSKTPTIYQNANVVQQQLLPPPPPPPLPPSQQQQQQQQHFSAQQQQQQYHQQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAASHHQHQQHQTQQQQQQQQQLLQQQQQHHHHNSSNSSNSSSAAGSDPLNPLNHHHAHHHGHPHGQLLHAAHHLHHGADSNSSSANSTPNSTAQLAATIASTLNGNKSLLQAAAAANVAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPGFLPNLPSLPAFQFAAAAAAGQDPRAQHFRFADAELQMQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDSAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSSAVAAQQQEHQRRHAVDDTHSNEDSKSPPQSCSSPFYKDQQIKHLPPQQQQQLQHATEHAQREQREAAAAVVAVHQQQQQQQREQREQREAAQREQQQRIRHDDLGPDKMARLYQELMTRTPREAAFPGFLLTPFFGGAAGMPGAPANPFPTAMAADENMRHVLEREIAKLQQQQAQQAQQAASFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLEQHSGGSSSCSKDGERGDDNDRSYPALSHAARKSEGGNTPAPPAPTLTQTSAGSGSNSNAANSTVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQATLPMQKMMNELKLQEPGQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQAQASQHQQAQHQQNMLLTSPGLPPQHAISLPAAVTPSGIQSNAGNPTAAGSTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGSHEPEHTPITEYEKALQKSALASAAAAAAYLSNAARSSRRKPAAPQWVNPAGAGTPTAAGVAPNSADISSSTERIINGVCVMQGGSDFNRDESDSIKGGDSNAADAEQDEHAQLEIEQRFMEPEVRIKQEEDDEDEQLQQQQQQQKQQLEDAAPLDSDAEKQLSNVINEDKLRLVRVRRLSSNGDAEEHSTAAAQLAATAGAPVAPAAASWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2