Dkur012500.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila kurseongensis
Gene Symbol
-
Assembly
GCA_018153305.1
Location
JAECXX010000045.1:5203435-5209863[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0096 0.71 10.4 0.3 1 23 1292 1315 1292 1315 0.95
2 13 6.8 5.1e+02 1.4 0.2 1 23 1464 1486 1464 1486 0.91
3 13 0.00015 0.011 16.1 2.7 2 23 1489 1510 1489 1510 0.97
4 13 5.9e-05 0.0044 17.4 0.2 3 23 1518 1538 1516 1538 0.98
5 13 4.9e-07 3.6e-05 23.9 4.1 2 23 1545 1566 1544 1566 0.97
6 13 4.6 3.4e+02 2.0 0.4 5 23 1579 1597 1577 1597 0.96
7 13 1.1 85 3.9 5.4 3 23 1604 1625 1602 1625 0.93
8 13 0.12 9.1 6.9 0.2 2 23 1636 1656 1635 1656 0.96
9 13 0.00012 0.0092 16.3 0.3 1 19 1662 1680 1662 1684 0.95
10 13 3e-05 0.0022 18.3 0.4 1 23 1692 1714 1692 1714 0.98
11 13 8.8e-05 0.0065 16.8 7.6 1 23 1720 1742 1720 1743 0.96
12 13 0.00019 0.014 15.8 6.5 1 23 1748 1770 1748 1770 0.98
13 13 0.0023 0.17 12.4 6.1 1 23 1776 1798 1776 1799 0.96

Sequence Information

Coding Sequence
ATGGTCGACAACAGCGTTCAGTGCCCCGTGTGCACTTTGTACCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACCCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTGCAGATGACGATCGTCGGGAGCGGTGGCAGCAGCATGGGCAGTGTTCTGGCTGCCGCCATGCTGGCAGGAGGAACTGGGGGTGGATCCAGTGGTGGCGAGGCCAGTGCGGCTGATGAGAAACCAGCCGTTTCATCATTACCTTCTGCTGGCGATGTCAAACCAGTTGTGGCCCAAACCATATCAGCGGCAGAACCAGCTGCGCCTGTGGTGCCGCTAGCACCGCCACCGCTCTCCTCCTCCCTCGTGGCAGCCTGCTCCAACGGAGCCGCCTCCTCCACAACCAGCTCCACACCCACCTCCCCCAACGCAAGCAGCAGCAACAGCAGCAAACCGAGCAATCCACCGATGAAAGCACTGAAATGCGCACCGCCCACGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACGAGCAGCGTGTCCACTTTGTACCAGCCATCGCAGGTCACTCCGGATTATCGCTTCAACCCGCAGCAGCAGCAGCAACATCAGCCACAGACGACGGCCATTGGGCGTGGTGTCAACGGCTCCGCAGCGACGCTGGTGATACCACAGGTGCCACAGCAGCACTTCCTCGCCAGCCATCAGCAGCAGGCTCACTTCACCCATCAACAGCAGCCCCCGCAGCAGCAGCCGCCGCAGCAGCACCAACAACAGCAGCAGCCTGCCCTTAAATTCAGCTACGCCACAGCTTTTCCGCCGCTGCAGCTTTTTACGCAGCAACAGCCGACGGCTGCTCCATCGCAGTCGCAGCAGCAGCAATCGCACCAGAAACCACCTCCCGCCTACGGAGCCGCCATCAGTCAAATACGATCTCAGCACAACCAAAACAAGCAGCAGCCACAGTCTCAAAATGTGGCCGTGCACCATAGCTTAGCTCTGGCACCACCGACGACAGCAGCGGCTTCAACTCCCCTTGCAACTGCAACTGGCAAGCAGCTCAGTAAGCCGCTGGCGGAAGTATTCCTGAATCCCCCACCACCGCCACCGGCACAGCAACAGGTGCAGATACACAATTTGGTACAGCATCAGGGCAATCAAAATCAGCATCAACATCCGCACCACCAGCAGCAGCAGCCGAACCAGCAGCTGGCCACATCGTCCTCCGCCAGGTTGCAGCAGCATCACCAGCAGTCGCCAAGCTTGCAGGCTTACGGATCTAGTGTCAGCAGTACCTGCAGTTCCTCCAGCAACCCATCCACCTCGGCATCTGGCCTGCGGGCCAATCGTCAGACAAATTCTCCGTTTGGAGCCCTGCTCAATGCTGCGGCGGCTGTGGCCTGCGCCTCGCCAGCATCCTCCAGCGCCTCCTCGTCGGTGTTGCGCTTTGCTGAGTCGCCGGTGGCCCATTACCTGGAGCGCGAGAATGGAGACTTTATTGTCCAGGAGACGCCAAAGCATATTGTGGAGTGTGTGGAGAAGGAGGACGGGGAGTTCTCCGTCATCGAGCGCATTTACCAATCTCCGCCGAGTGTCCTGCACATACACGATGACGATGAGGACGAAGAGGATGAGGAGGAGGAGGACGACCACGAAGCTCCGCCGGAGGAGGAGGACGGTGACGATGAGCGGGAGGAGAACAGTCACAGCCGGAACATAAGCAAGACAACGAAAAAGGCTCGCAGGACAAAGCCGAAGCGAAGCTCCAAGCGCGACTCGGACGAGGAGGAGTTCATGAGCCTCAGCAGTGGTTGCGAAAGTGAGCTGGAAAGGGAGCGTAAGCCGGAGCAGCCGACTATAGCGACACCGCTACCTCCTCCACTTTGCACAGCTCCTTCTACAAGCACTGCTGGTGCGTTCACTTCCTCCTCCAATCAAGCGGATAATCATTCCAATTCCGCCTCCAACTCCGCATCCAATTCCAACACCATAACCACAACAAAGTCCAAGAAGAATCGAATTACAGTGCTCAGCGATGTGCCGCTCAATATGAATGAGTATCTCGATTTGATGGGCAACATAGTGGCCTCCAGTCGCATTGGGGCAGGTCGTCCCTTTGCCGCTGTGGCGCCCATACCACTCGTCAAGGTGGAGAAGGAGGAGCCCTTGGACGACTACGACAATGTGGCGGTGGCAGCCCAGCAGCTGGAGCAGAAGCCTAGCCTGGAGCACGGCACCACCAGCGTGATTCGCATGGCAAGCACGGCCACGGCGACGGCGCCCGCAACGGCGTCTGGAGTGTCTCCCGAGGATCTCACCCAGCCGCCGCCCGTAAAGGTCGAGGTGGAGCCCAACACAACACTGCTACCGCAGCGATTCACCACTCCCGCACAGCAACGCGGCCCCAAGAAATTAGTCATCAAACCAAAAGCAACTGCACCAGCGACAGCGACGACAACGAAAAAGACTGACTCCCCATCTTCCTCCAGCAGCAACCCATCCATATCAAGAGATCTGGTGCAGGTGAAGAGTGAGACCCAGGAGGCTCCAGCGCCTTGCAGTAGCAGCAGCATTCTGGAGAAGCACCTGACCGCCAGTCGCAAACTGCTGCACCATCACTCGGCGGCGAACGATGACGATGCCCGGGTGCTGTTGGAGTTTGCAAACTCTAAGCAACCGCCACCACTGGCCGCTTCCAGCACCACGTTCGTGGTGAATGCCAGTGTCGGATTTCCCTCGGCGGGATCGGTCTTCGCCAGCAGCAGCAGCAACAACACCTGCCCCAAAATGGCGTCGGCAGCTGTGGCGACGGCTAAGCCAGGCGAGGAGTACATCCTGCCGGACAACAACATGGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACACCTCATCAGCGGCCCAGGTGCAGGCCACGCTGCAGCCGCCGGACTTTAACTTTCTGTACCACCAGACCACAACCACGGCCACAACGGCCACCTACTTCAACCCCTTTTCCAGGCAGCAGCATCATCATCCGCAGCACCAGCAGCATGGGGTGAGCGATGCCACCAATGCGGCCACCCTGGCCTCGTCGTCCAGTAATTCCATGGATCACGACTCAATGAGTGCAACATTCCGCGTGGCCAAGACACAGTCGCTGCAGTCGTGGTTCCAGCAGGGGCAGGAACACGACGCCCAGAATCAGGGGGGAGCTGAGTCGGGAACAGGGACACCCTCCAATCAGAGCCAGGATGTGGTCAGCCACCAGCCCACCAATTTTAATGCCGCTCTGGCGGCAGTCGATTGCTGTAGCGTTGCCCTGGATGAGGATGCCAAGTATCTGGATCTGGACGCCTGCAAACGAGAGCAGTTGAGCAGCAGCAGTAACCTGCCCTCGGCCTCCGCATCCACCACGTCGTCTTCATTCGCCGGCGCTGGGACGGAGAGCAGTTTGGTGGGTGGCCTGAACATCCGCACCGATGAGAAGATGCCCGCTAAGGGTGAAATCTCCGAACAGGAGAGCAACTGCGACATCGAGAACTCCTGGAGTGAATCGGTTTATGGGGATATTTCTCAGCGGTATTTCAGGAATCAGTTCTCTGGCGGATACAATCCCGACTGGCGACAGGATTACTACCCGGCTCAGGATCTCAGCGCCCAGCAGAGGGAGCAAAAACGTTTCGAGTTCAATGCGGTTGATGATGAAGCTTCATCCAGCTCCAGAAAGAGTCAACTAATGGATGGCGTCCCAACTGCGGCCACCTCCACCACATCCGCGTCATCGGCTTTGTTGGCGGGTCCACCAATAGCTTCGACATCTCGGGCTGCCGCAGAGGCGGCAGCGGAGGCGGCTGCTCTGGCGCAGCGGAAACCACAGCGTCGCAAGCTGTACAAGTGTCCCCACTGCGAGGCGATCTTTGAAAAGCTCAAAGAGCGCAATGCGCATATGATTGGCGAGCACAACTACGTCCGGCAGAACCGCCGGCTCATTTGCACTCAGCCGCAGGTCAGCGCTTCAATGTTGCCACCGCAGCAGCAGATGATCCTGCAGTCGGGCGAAGGTCTGCAGGAGGATTCCAAGGATGGCATTGTCAAGATAAAACAGGAGCAGTGCCAGGAGAAGCAGGAGGTGGAGCATATGCACGCCCATTCCGACTTGCTATCGGATGTCAAGGACTCCGAGCTGCTAGGCATCGGTGGTGATGGCGACGGTGATGTGGATGGCGACATAAAGCCACCTAGCCAGTTGGATGAGAAGCCCACGCTACCGCCGCTGGCCATGACAACGCCGGCAGCCAAGCTGGCTGCTCTGTATCGCATGCTCATCGCCTACAATGAATCCAAGCTCGGTCAGGAGCGCAACAACCTCAGCGAGCTGGAGCAGAAGGCCATGGAGAAGTCAATCTTTCTTTGCTATGTCTGCCGCACCGACTTCCCGTCTGTAAAGCTGTACGACGCCCATCTCACCGAGCATCCAGCTGAGTGCTTCACCTGCGGCAAGAAGTTCTATCGCTGGAAGAACTTCTCGTTGCACTTGAAGCGACACTTGGGCTGGAAGGAGTTTGGATGCTACGTCTGCGACAAGAAGTTCGTGGTGCGCAGCGCCCTTGTCGAGCACATGCGGATGCACACGGGCCAAACGCCACTCAAGTGCAAGATATGCGGCAAAAAGTTTAAGCGCTACTCGAATCTGACGCAACACCGTAAGCGACACACCAAAATGATGGTGCGCAAAAAGGAGTACGTTTGCCACTGCGGCGAGGTGCTGCCCTCGAAGGCTCGCTTCCTGTGGCACAAGGAGACGCACGACCTGAAGCCCAAGTGCTGTCCGTACTGCTGCGATCGGTTCGTGCACGCCAACTCGCTGCGTCGTCATATTCGGCTGGCGCACTCTGACAAGTTCGACTACGCCGAGCCGATGGAGTGTCCAATGTGCAAGCAGATTTTCGCCAAGACGTCCATCAAGGCGCACATGGCGACGCACTCGACGGAGCCGCAGTACGACTGCGCCATCTGCAGCAAGAGCTTCTCCACCAAATGGAATCTCAAAATCCACTCGTGGGTGCACGCCAACCGGACGGCCAAGCCATTCAAGTGTGAGTACTGCCCGAAGGCTTTCGTGCGGGAGCTGGACTTCAAGAACCACATCAACGCGCACAAACAGATCAAGCCGTACACATGCGAGTACTGCGGCTGCAAGTTCATCCGCAAGTACAACTACATGAGGCACCGGCGCGAACATCATGGCACCAAAAAGTTCACATGCGATCAGTGCGACAAGTCCTTCCATCGACACTACTATCTGATCGAGCACCGGCGCATGCACACCGGGGAGCGGCCGTTCACCTGTACCATCTGCGGCAAGAGTTCCACCACGAAGACCAACCACAACAAGCATCTGAAGATCCACCACTCGCGTGATCCGTTCACTGTGGAGGCTTAA
Protein Sequence
MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGSSMGSVLAAAMLAGGTGGGSSGGEASAADEKPAVSSLPSAGDVKPVVAQTISAAEPAAPVVPLAPPPLSSSLVAACSNGAASSTTSSTPTSPNASSSNSSKPSNPPMKALKCAPPTTEARANTSAHPTTSSVSTLYQPSQVTPDYRFNPQQQQQHQPQTTAIGRGVNGSAATLVIPQVPQQHFLASHQQQAHFTHQQQPPQQQPPQQHQQQQQPALKFSYATAFPPLQLFTQQQPTAAPSQSQQQQSHQKPPPAYGAAISQIRSQHNQNKQQPQSQNVAVHHSLALAPPTTAAASTPLATATGKQLSKPLAEVFLNPPPPPPAQQQVQIHNLVQHQGNQNQHQHPHHQQQQPNQQLATSSSARLQQHHQQSPSLQAYGSSVSSTCSSSSNPSTSASGLRANRQTNSPFGALLNAAAAVACASPASSSASSSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEDDHEAPPEEEDGDDEREENSHSRNISKTTKKARRTKPKRSSKRDSDEEEFMSLSSGCESELERERKPEQPTIATPLPPPLCTAPSTSTAGAFTSSSNQADNHSNSASNSASNSNTITTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVAPIPLVKVEKEEPLDDYDNVAVAAQQLEQKPSLEHGTTSVIRMASTATATAPATASGVSPEDLTQPPPVKVEVEPNTTLLPQRFTTPAQQRGPKKLVIKPKATAPATATTTKKTDSPSSSSSNPSISRDLVQVKSETQEAPAPCSSSSILEKHLTASRKLLHHHSAANDDDARVLLEFANSKQPPPLAASSTTFVVNASVGFPSAGSVFASSSSNNTCPKMASAAVATAKPGEEYILPDNNMDVDEIVISSSSSYTSSAAQVQATLQPPDFNFLYHQTTTTATTATYFNPFSRQQHHHPQHQQHGVSDATNAATLASSSSNSMDHDSMSATFRVAKTQSLQSWFQQGQEHDAQNQGGAESGTGTPSNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDACKREQLSSSSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSAQQREQKRFEFNAVDDEASSSSRKSQLMDGVPTAATSTTSASSALLAGPPIASTSRAAAEAAAEAAALAQRKPQRRKLYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVSASMLPPQQQMILQSGEGLQEDSKDGIVKIKQEQCQEKQEVEHMHAHSDLLSDVKDSELLGIGGDGDGDVDGDIKPPSQLDEKPTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA