Dosh010586.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- -
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000267.1:49428-55567[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.009 0.66 10.5 0.3 1 23 1165 1188 1165 1188 0.95 2 13 6.4 4.7e+02 1.5 0.2 1 23 1338 1360 1338 1360 0.91 3 13 0.00014 0.011 16.2 2.7 2 23 1363 1384 1363 1384 0.97 4 13 5.5e-05 0.0041 17.5 0.2 3 23 1392 1412 1390 1412 0.98 5 13 4.6e-07 3.4e-05 24.0 4.1 2 23 1419 1440 1418 1440 0.97 6 13 4.1 3e+02 2.1 0.4 5 23 1453 1471 1450 1471 0.95 7 13 1.1 80 4.0 5.4 3 23 1478 1499 1476 1499 0.93 8 13 0.11 8.5 7.0 0.2 2 23 1510 1530 1509 1530 0.96 9 13 0.00012 0.0086 16.4 0.3 1 19 1536 1554 1536 1558 0.95 10 13 2.8e-05 0.0021 18.4 0.4 1 23 1566 1588 1566 1588 0.98 11 13 8.2e-05 0.0061 16.9 7.6 1 23 1594 1616 1594 1617 0.96 12 13 0.00017 0.013 15.9 6.5 1 23 1622 1644 1622 1644 0.98 13 13 0.0021 0.16 12.5 6.1 1 23 1650 1672 1650 1673 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGTGTTCAGTGCCCTGTGTGCACTTTGTACCTCCACGCGGGTATGAATCTCTCCGATCACTTGGAGACGCACCCCAAGGAGCAGGTGATCAAGGCGCTGGTGCAGATGACAATCGTCGGGAGCGGTGGCAACAGCATGGGCAGTGTTCTGGCTGCCGCCATGCTGGCAGGTGGCACTGGAGGAGGATTGAGCGGTGGTGAAGCCAGTGCGGTAGATGAAAAACCAGCCACCTTATCAACGCCTTCTGGTGGCGATGTCAAACCAGTTGTGGCCGACAGCCAGCTAGCGATGTCCAAAACCATATCAGCAGCAGCGCCTGTGGTGCCGCCAGCACCCCCACCGCTTTCCTCTTCCCTCGTCGCTCCCAGCTCCTCCACATCCAGCTCCACAAGCAACTCCCCATCCCCAAGCACTTTGCCGCCACCTCCCCCACTGCAGCTATTTACGCAGCAACAGCAGCAGCAGCAACAGTCGTCTCCAGCTCCGTCGCAGCCGCAGCCGCAATCACACCAGAAACCACCTCCCGCCTACGGAGCCGCCATCAGTCAAATACGATCTCAGCACAACCAAAACAAGCAGCAGCCACAGCAACCAAACGTGACCGTACACCACAACCAAGCCCTGGCACCACCGACGACAGCAGCAGTAGCAGCAGCAGCTTCTCTTGCAACTGCATCCGGCAAGCAGTCCAGCAAGCCGCACACGGAAGTATTCCTGAATCCCCCACCACCGCCGTCGGCACAGCAACTAGCGCAGATCCACAATCTGGGACAGCACCAGCAGAATCAGAGCCAGCACCATCAGCATCCCCACCAACAGCAGCAGCAGAACCAGCCGCTTGCCACATCGTCGTCCGTCAGATTGCAGCAGCAACACCAGCAGCCAACGAGCTTGCAGACTTACGGATCGGGTGTCAGCAGTAGCTGCAGCTCCTCCAACAACACCTCATCCTCTGCACCAGGACTTAGGGCCAATCGACAGACGAACTCTCCATTTGGAGCTCTGCTCAATGCGGCAGCGGCTGTTGCCTGTGCCTCACCGGCCTCTTCCACCGCATCCTCGTCGGTGCTGCGCTTTGCGGAGTCGCCGGTGGCCCACTACCTTGAGCGCGAAAATGGAGACTTCATCGTCCAGGAGACGCCAAAACACATTGTGGAGTGCGTGGAGAAGGAGGACGGAGAGTTCTCTGTGATCGAGCGCATTTATCAATCCCCGCCGAGTGTCCTGCACATACACGACGACGATGAAGACGAAGAGGACGAGGAAGAGGAGGAGCACGAGGCTCCGCCAGAGGAGGATGACGGTGACGATGAGCGGGAGGAGAACAGCCACAGTCGGAACATGAGCAAGACAACGAAAAAGGCGCGCAAGACGAAGCCCAAGCGCAGCTCCAAGCGCCACTCCGACGAGGAGGAGTTCATGAGCCTCAGCAGCGGTTGCGAGAGCGAGCTGGAAAGGGAGCACAAGCAGGAGCTGGAGGCACCTCTGCCGCCTCCTCTCTGCACAGCTCCTTCTACGAGCACTGCAGCTTCGATTGCGGTCACCTGCAATTCCTCCTCCAACTTAGCGGACAATCATTCCAATTCCGCCTCCAACTCTGCCTCCAATTCCAACTCCACCACCACCACAAAGTCCAAGAAGAATCGAATTACAGTGCTCAGCGATGTACCGCTCAATATGAATGAATATCTCGATTTGATGGGCAACATTGTGGCCTCCAGTCGGATTGGTGCAGGTCGTCCCTTTGCCGCCGTGGCTCCCATTCCGCTCGTCAAGGTGGAGAAGGAGGAGCCCATAGACGACTACGACAATGTGGCAAACCAGCAGGCGGAGCAGAAGCCCAGCTTGGAGCACGGCACCACCAGCGTCATTCGGATGGCCAGCACGGTTGCCGCGACGGCAGTTGGGAGTGGACTGGCGCCTGGAGTGTCTCCCGAGGATCTCACTCAGCCACCACCCATGAAGGTCGAGGTGGAGGCCACCACCACCCTGCTCCCGCAGCGCTTCTCCACGCCCGCCCAGCAGCGCGGGCCGAAGAAATTAGTCATCAAACCAAAAGCGACAGCACCAGCGACAGCGACGACAACGAAAAAGACTGACACCCCATCTTCCTCCAGCAGCAACCCATCCATATCAAGAGATCTGGTGCAGGTGAAGAGTGAGACCCCGGAGGTCCCATCGACGAGCAGCGGCAGCATTCTGGAGAAGCACCTGACCACCAGCCGCAAGCTGCTGCTCCACCACTCGGCGGTGAACGACGACGATGCCCGGGTGCTGTTGGAGTTTGCGAACTCGAAGCAGCCGCCACCGCTGGCCGCTTCCAGCACCACGTTCGTGGTAAATGCCAGTGTGGGATTCCCCTCGGCGGGATCGGTCTTCGCAAGCAGCAGTTGCAGCAGCTCCAAAACAGCGACCAAGCCGGGCGAGGAGTACATCCTGCCGGACAACAACATGGATGTGGACGAGATTGTGATATCCTCGTCGTCGTCCTACACCTCCTCAGCGGCCCAGGTGCAAGCCACTCTGCACCCGCCGGACTTTAACTTCCTGTACCACCAGACCACCACCACGGCCACAGCGGCCACCTACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCAGCCACCCTAGCGTCTTCGTCCAGCAATTCCATGGACCACGACTCGATGAACGCGACATTCCGGGTGGCCAAGACGCAGTCGCTGCATTCGTGGTACCAGCAGGAGCCGGAGCACGACCCGCAGAACCAGAATAGGGCGGAATCGGGGGCAGCTACTCCCTCCAACCAGAGCCAGGATGTTGTCAGCCACCAGCCCACCAATTTCAATGCCGCCCTGGCAGCCGTCGATTGCTGCAGTGTGGCCTTGGACGAGGATGCCAAGTATCTGGACCTGGACGCCTGCAAGCGGGAGCAGTTGAGCAGCTGCAGCAACCTGCCCTCGGCCTCCGCCTCCACTACGTCGTCTTCATTCGCCGGAGCCGGCACGGAGAGCAGCTTGGTGGGTGGCCTGAACATCCGCACCGATGAGAAGATGCCCGCTAAGGGAGAAATCTCCGAGCAGGAGAGCAACTGCGACATCGAGAACTCCTGGAGCGAGTCGGTTTATGGCGACATTTCGCAGAGGTACTTCAGGAACCAGTTCTCTGGGGGCTACAACCCCGACTGGCGACAGGATTACTACCCGGCTCAGGATCTCAGCGCCCAGCAGAGGGAGCAAAAGCGCTTCGACTTCAATGCGGTTGATGATGAGGCTTCATCCAGCTCTAGGAAAAGCCAGCTGATGGATGGCGTCCCAATCGCAGCCACCTCCTCCACATCCACGTCTTCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACATCTCGGGCTGCCGCAGAGGCGGCAGCGGAGGCGGCTGCTCTCGCCCAGCGCAAACCGCAGCGACGTAAGTTGTACAAGTGTCCCCACTGCGAGGCGATTTTCGAGAAGCTCAAGGAGCGGAATGCGCACATGATTGGCGAGCACAACTATGTGCGGCAGAACCGCCGGCTCATCTGCACTCAGCCGCAGGTAAGCGCCTCGATGCTGCCCCCACAGCAGCAGCAGCTGATCCTGCAGGCGGTTGAGGGGGTGCAGGAGGACTCCAAGGACGGGATTGTGAAAATAAAGCAGGAGCAGTGCCAGGAAAAGCAGGATGTTGAGCATATGCACGCTCACTCTGACTTGCTGTCAGATGTCAAGGATTCGGAGCTGCTAGGCATCGGTGGTGACGGTGATGGAGATGTGGACGGCGACATTAAACCACCCAGCCAGCTGGACGAGAAGCCCACGCTGCCACCGCTGGCCATGACGACGCCAGCCGCTAAGTTGGCGGCGCTGTACCGCATGCTCATCGCCTACAACGAGTCAAAGCTCGGACAGGAGCGCAACAACCTCAATGAGCTGGAGCAGAAGGCCATGGAGAAGTCCATCTTTCTCTGCTACGTCTGCCGCACCGACTTCCCATCCGTAAAGCTCTACGACGCCCATCTCACCGAGCATCCAGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAAAACTTTTCGCTGCACCTGAAGCGGCACCTCGGTTGGAAGGAGTTCGGATGCTACGTATGCGACAAGAAGTTTGTGGTGCGCAGCGCCCTCGTCGAGCACATGCGGATGCACACGGGTCAAACGCCGCTCAAGTGCAAAATATGCGGCAAGAAGTTCAAGCGCTACTCGAATCTGACACAACATCGCAAGCGGCACACCAAGATGATGGTGCGTAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCCTCGAAGGCGCGCTTCCTGTGGCACAAGGAGACACACGACCTGAAGCCTAAGTGCTGTCCGTACTGCTGCGACCGGTTCGTGCACGCCAACTCGCTGCGCCGCCACATCCGTCTGGCGCACTCGGACAAGTTCGACTACGCCGAGCCGATGGAGTGCCCCATGTGCAAGCAGATCTTTGCCAAGACGTCGATAAAGGCTCACATGGCGACGCACTCGACGGAGCCGCAGTATGACTGCGCCATCTGCAGCAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTGCACGCCAACCGGACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCAAAGGCGTTCGTGCGGGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAATACTGCGGCTGCAAGTTCATCCGCAAGTACAACTACATGAGGCACAGGCGCGAGCACCACGGCACCAAGAAGTTTACCTGCGACCAGTGCGACAAGTCCTTTCACCGGCACTACTATCTGATCGAGCACCGGCGCATGCACACCGGTGAGCGGCCATTCACCTGCACCATCTGCGGCAAGAGCTCCACCACGAAGACCAACCACAACAAGCATCTGAAGATCCACCACTCGCGCGATCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGNSMGSVLAAAMLAGGTGGGLSGGEASAVDEKPATLSTPSGGDVKPVVADSQLAMSKTISAAAPVVPPAPPPLSSSLVAPSSSTSSSTSNSPSPSTLPPPPPLQLFTQQQQQQQQSSPAPSQPQPQSHQKPPPAYGAAISQIRSQHNQNKQQPQQPNVTVHHNQALAPPTTAAVAAAASLATASGKQSSKPHTEVFLNPPPPPSAQQLAQIHNLGQHQQNQSQHHQHPHQQQQQNQPLATSSSVRLQQQHQQPTSLQTYGSGVSSSCSSSNNTSSSAPGLRANRQTNSPFGALLNAAAAVACASPASSTASSSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEEHEAPPEEDDGDDEREENSHSRNMSKTTKKARKTKPKRSSKRHSDEEEFMSLSSGCESELEREHKQELEAPLPPPLCTAPSTSTAASIAVTCNSSSNLADNHSNSASNSASNSNSTTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVAPIPLVKVEKEEPIDDYDNVANQQAEQKPSLEHGTTSVIRMASTVAATAVGSGLAPGVSPEDLTQPPPMKVEVEATTTLLPQRFSTPAQQRGPKKLVIKPKATAPATATTTKKTDTPSSSSSNPSISRDLVQVKSETPEVPSTSSGSILEKHLTTSRKLLLHHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASVGFPSAGSVFASSSCSSSKTATKPGEEYILPDNNMDVDEIVISSSSSYTSSAAQVQATLHPPDFNFLYHQTTTTATAATYFXXXXXXXXXXXXXXXXXXXXXXXXAATLASSSSNSMDHDSMNATFRVAKTQSLHSWYQQEPEHDPQNQNRAESGAATPSNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDACKREQLSSCSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSAQQREQKRFDFNAVDDEASSSSRKSQLMDGVPIAATSSTSTSSALLAGPPIASTSRAAAEAAAEAAALAQRKPQRRKLYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVSASMLPPQQQQLILQAVEGVQEDSKDGIVKIKQEQCQEKQDVEHMHAHSDLLSDVKDSELLGIGGDGDGDVDGDIKPPSQLDEKPTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLNELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00529734;
- 90% Identity
- -
- 80% Identity
- -