Dlut003986.1
Basic Information
- Insect
- Drosophila lutescens
- Gene Symbol
- -
- Assembly
- GCA_037075285.1
- Location
- JBAMCF010000214.1:18036-24188[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.011 0.89 10.4 0.3 1 23 1277 1300 1277 1300 0.95 2 13 7.9 6.3e+02 1.4 0.2 1 23 1449 1471 1449 1471 0.91 3 13 0.00018 0.014 16.1 2.7 2 23 1474 1495 1474 1495 0.97 4 13 6.8e-05 0.0055 17.4 0.2 3 23 1503 1523 1501 1523 0.98 5 13 5.6e-07 4.5e-05 23.9 4.1 2 23 1530 1551 1529 1551 0.97 6 13 5.3 4.3e+02 2.0 0.4 5 23 1564 1582 1562 1582 0.96 7 13 1.3 1.1e+02 3.9 5.4 3 23 1589 1610 1587 1610 0.93 8 13 0.14 11 6.9 0.2 2 23 1621 1641 1620 1641 0.96 9 13 0.00014 0.012 16.4 0.3 1 19 1647 1665 1647 1669 0.95 10 13 3.4e-05 0.0028 18.3 0.4 1 23 1677 1699 1677 1699 0.98 11 13 0.0001 0.0082 16.8 7.6 1 23 1705 1727 1705 1728 0.96 12 13 0.00022 0.017 15.8 6.5 1 23 1733 1755 1733 1755 0.98 13 13 0.0026 0.21 12.4 6.1 1 23 1761 1783 1761 1784 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGTGTCCAGTGCCCCGTGTGCACATTGTACCTGCACGCGGGCATGAATCTCTCCGATCACTTGGAGACCCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTGCAGATGACGATCGTCGGGAGCGGTGGCAACAGCATGGGCAGTGTTCTGGCTGCCGCCATGCTGGCAGGAGGATCTGGAGGTGGATCAAGCGGTGGCGAAGCCAGCAGTGCGGCGGCAGACGAGAAACCAGCCGTCTTATCACCGCCTTCTGGTGGCGATGTCAAACCAGTTGTGGCCAATACCATATCAGCAGCACCAGCGGCAACAGCAGTGGCGCCTGTGGTGCCGGCAGCACCGCCACCGCTCTCCTCCTCCCTCGTGGCAGCCTGCTCCAACGGAGCCGCCTCTTCCACACCCAGCTCCACGCCCACCTCCCCCTCcgcaagcagcagcaacagcagcaaaccGAGCAATCCACCGATGAAAGCACTGAAATGCGCACCGCCCACGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACGAGCAGCGTCAGCCCGCAAACGACGGGCTTTGGGCGTGGAGTCACCACCTCGGCAGCCACACTGGTGATACCGCAGGTGCCTCAGCAGCACTTCCTCGCCAGCCACCAGCAGCAGGCTCACTTTAcacatcagcagcagccgccgcagcaacagcaacaacaacagcagcagcagcctgcCCTGAAGTTCAGCTATGCCACAGCTTTGCCCCCACCTCCGCCGTTGCAGCTATtaacgcagcagcagcagcaacatccgaCGGTTGTCCCTTCGCAAACGCAGCAGCAATCGCACCAGAAACCACCTCCCGCCTACGGAGCAGCCATCAGTCAAATACGATCTCAGCACAACCAAAAcaagcagcagccacagcctCAAAACGTGGCCATGCAGCATAACCTAGCCCTGGCACCACCGACAACAACAGCACCGGCTTCTACTGCACTTGCAACTGCAGCTGGCAAACAGCCGCCCAGTAAGCCGCATACGGAAGTATTCCTGAATCccccaccaccgccaccggcACAGCAACAGGCGCAGCAGATCCACAATTTGGTGCAGCATCAGCAAAATCAGGGCCAGCTCCATCAGCATacccaccaccagcagcagcagaacctTCCGATGGCCGCCTCGTCCTCCTCTAGGTTGCAGCAGCATCACCAGCAGCCACCGAGCGTGCAGACCTACGGATCAGGTgtcagcagtagctgcagttCCTCCAACATCCCCTCCACCTCGGGATCTGGACTTCGGATGAATCGTCAGACCAACTCGCCCTTTGGAGCGCTGCTCAATGCTGCGGCGGCTGCGGCCTGCGCATCGCCAGCCTCCTCTACCGCATCCTCGTCAGTCCTGCGCTTTGCCGAATCCCCGGTGGCACATTACTTGGAGCGTGAAAACGGTGACTTCATTGTCCAGGAGACGCCAAAGCATATTGTCGAGTGTGTGGAAAAGGAGGACGGAGAGTTCTCCGTAATCGAGCGCATTTACCAATCCCCGCCGAGCGTTTTGCACATACACGATGACGATGAGGACGAAGAGgatgaagaggaggaggacgacgaccATGAAGCTCCGCCGGAGGAGGACGACGGGGATGATGAGCGGGAGGAAAACAGCCACAGCCGTAATGTGGGCAAGACAACGAAAAAGGCTCGCAAGACGAAGCCCAAGCGAAGCTCCAAGCGGGTCTCGGACGAGGAGGAGTTCATGAGCCTAAGCAGCGGATGCGAGAGTGAGCTGGAAAGAGAGCGTAAGCAGGAGCAGCCCAATACTGCGGCACCTCTACCGCCTCCGCTGTGCACGGCTCCGTCTACGAGCACCGCTGGTGCTTTCGCTTCCTCCTCCAATCTGGCGGATAATCATTCCAATTCCGCTTCCAACTCCGCCTCCAATTCAaactccaccaccaccaagtCCAAGAAGAATCGAATCACCGTGCTCAGCGATGTGCCGCTCAATATGAATGAGTATCTCGATTTGATGGGCAACATTGTGGCGTCCAGTCGTATTGGAGCAGGTCGTCCCTTTGCCGCTGTGGCTCCCATACCACTCGTCAAGGTGGAAAAGGAGGAGCCCTTGGACGACTACGATAATGTGGCAATGGCAGTGGCTGTGGGTCCTACTGAACTGGAGCAGAAGCCTAGCTTGGAGCACGGCACCACCAGCGTCATTCGGATGGCAAGCACGGCTGCCGCGACAACGTCTGCGACGGCGCCTGGAGTGTCTCCCGAGGATCTCACCCAGCCGCCGACAATGAAGGTCGAGGTGGAGCCCACAACATTGCTACCGCAGCGCTTCTCCACTCCCGCACAACAACGCGGACCCAAGAAATTAGTCATCAAACCAAAAGCAACAGCACCAGCGACAGCGACGACAACGAAAAAGACTGACACCCCATCTTCCTCCAGCAGCAACCCATCCATATCAAGAGATCTGGTTCAGGTGAAGAGTGAGACCCTGGAGGCTCCAGCGcccagcagtagcagcagcattCTGGAGAAGCACCTGACCACCAGCCGCAAACTGCTGcaacaccactcgaccgttaACGATGACGACGCACGGGTGCTGTTGGAGTTTGCTAACTCGAAGCAGCCGCCGCCACTGGCCACCTCCAGCACCACGTTCGTAGTGAATGCCAGTACCGGCTTCCCCTCGGCGGGATCAGTGTTCGCCAGCAGCAGTAGTGGCTGTTCCAAAGCACCGGCCAAGCCGGGCGATGAGTACATCCTGCCGGACAACaacgtggatgtggatgagATTGTGATATCCTCGTCGTCTTCCTACACTTCCTCAGCGGCCCAGGTGCAGGCCACGCTGCAGCCGCCGGACTTTAACTTTCTGTACCACCAGACCACAACCACGGCTACGACGGCCACCTACTTCAATCCCTTCTCCAggcagcagcatcatcagcagcagcagcaccaccagcatcagcagcatGGCGTTAGCGATGCCACCAACGCGGCCACCTTGGCTTCGTCGTCCAGTAATTCAATGGATCACGACTCAATGAATGCAACATTCCGGGTGGCCAAGACGCAGTCGCTGCAATGGtaccagcaggagcaggaacaCGATCCGCAGAACCAGGGCGGAGTGGAATCGGGAACAGCCACACCCTCCAATCAGAGCCAAGATGTGGTCAGCCACCAGCCCACCAATTTTAACGCCGCCTTGGCGGCCGTCGATTGCTGCAGCGTTGCCCTGGATGAGGATGCAAAGTATCTGGACCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGTAGCAACCTTCCCTCGGCCTCCGCATCCACCACGTCGTCTTCATTCGCTGGTGCCGGCACGGAGAGCAGTTTGGTTGGTGGCCTGAATATCCGCACGGATGAGAAGATGCCCGCCAAGGGTGAAATATCCGAGCAGGAGAGCAACTGCGATATTGAGAACTCCTGGAGTGAGTCGGTTTACGGGGATATATCGCAGCGGTATTTCAGGAATCAGTTTTCTGGAGGCTACAACCCCGAATGGCGACAGGATTACTATCCGGCCCAGGATCTCAGCGCCCAGCAGAGGGAGCAAAAACGTTTCGACTTTAATGCGGTTGACGATGAGGCCTCATCCAGTTCACGAAAGAGTCACCTAACAGATGTCGTCCCAACTGCGGCCACCTCCTCCGCGTCTACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACATCGCGGGCTGCCGCAGAGGCGGCAGCGGAGGCGGCTGCTCTCGCCCAACGGAAGCCACCGCGCCGCAAGCTCTACAAGTGTCCCCACTGCGAGGCGATCTTCGAAAAGCTGAAAGAGCGCAATGCGCACATGATTGGCGAGCACAACTACGTGCGTCAAAACCGCCGACTCATCTGCACTCAGCCGCAGGTCAGCGCCTCGATGCTGCCGCCGCAACAGCAGATGATCCTGCAGGCAGGCGAGGGTGTACATGAGGACTCCAAGGATGGCATAGTCAAGATTAAACAGGAGCAGTGCCAGGAAAAGCAGGATGTAGAGCATATGCATGCCCATTCCGAAATGCTGGCGGATGTCAAGGACTCGGAGCTGCTGGGCATCGGTGGCGACGGCGACGGGGATGTGGACGGCGATATTAAGCCACCCAGCCAGTTGGATGAGAAGCCCACGCTGCCGCCGTTGGCCATGACAACGCCGGCTGCCAAACTGGCAGCTTTGTATCGCATGCTCATCGCCTACAACGAGTCCAAGCTCGGCCAGGAGCGCAACAATCTCAGCGAACTGGAGCAGAAGGCCATGGAGAAGTCCATCTTTCTGTGCTACGTTTGCCGCACGGACTTCCCATCCGTAAAGCTCTACGACGCCCATCTCACTGAGCATCCGGCTGAGTGCTTCACCTGCGGCAAAAAGTTCTACCGCTGGAAGAACTTTTCATTGCACCTTAAGCGACACTTGGGCTGGAAAGAGTTCGGATGCTACGTCTGCGACAAGAAGTTCGTGGTTCGCAGCGCCCTCGTTGAGCACATGCGGATGCACACGGGCCAAACGCCCCTCAAGTGCAAGATATGCGGTAAAAAGTTCAAGCGCTACTCGAATCTGACGCAACACCGCAAGCGGCACACCAAGATGATGGTGCGAAAGAAGGAGTATGTGTGCCACTGCGGCGAAGTGTTGCCCTCGAAGGCGCGCTTCCTGTGGCACAAGGAGACACACGACCTGAAGCCCAAATGCTGTCCGTACTGCTGCGATCGGTTCGTGCACGCCAACTCGCTGCGTCGACACATCCGGCTGGCCCACTCCGACAAGTTCGACTACGCCGAACCGATGGAGTGCCCCATGTGCAAGCAAATCTTCGCCAAGACGTCGATCAAGGCGCACATGGCGACGCACTCGACGGAGCCCCAGTACGACTGCGCCATTTGCAGCAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTCCACGCCAACCGGACGGCCAAGCCCTTTAAGTGCGAGTACTGCCCAAAGGCGTTCGTGCGAGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTATACGTGCGAGTACTGCGGCTGCAAGTTCATCCGCAAGTACAACTACATGAGGCATCGGCGCGAGCATCACGGCACCAAGAAGTTCACCTGCGACCAGTGCGACAAGTCCTTCCATCGACACTACTATCTGATCGAGCACCGGCGCATGCATACCGGCGAGCGGCCATTCACCTGCACCATCTGTGGCAAGAGCTCCACCACGAAGACCAACCATAACAAGCATCTGAAGATCCACCATTCGCGCGATCCGTTCACCGTGGAGGCCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGNSMGSVLAAAMLAGGSGGGSSGGEASSAAADEKPAVLSPPSGGDVKPVVANTISAAPAATAVAPVVPAAPPPLSSSLVAACSNGAASSTPSSTPTSPSASSSNSSKPSNPPMKALKCAPPTTEARANTSAHPTTSSVSPQTTGFGRGVTTSAATLVIPQVPQQHFLASHQQQAHFTHQQQPPQQQQQQQQQQPALKFSYATALPPPPPLQLLTQQQQQHPTVVPSQTQQQSHQKPPPAYGAAISQIRSQHNQNKQQPQPQNVAMQHNLALAPPTTTAPASTALATAAGKQPPSKPHTEVFLNPPPPPPAQQQAQQIHNLVQHQQNQGQLHQHTHHQQQQNLPMAASSSSRLQQHHQQPPSVQTYGSGVSSSCSSSNIPSTSGSGLRMNRQTNSPFGALLNAAAAAACASPASSTASSSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEDDDHEAPPEEDDGDDEREENSHSRNVGKTTKKARKTKPKRSSKRVSDEEEFMSLSSGCESELERERKQEQPNTAAPLPPPLCTAPSTSTAGAFASSSNLADNHSNSASNSASNSNSTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVAPIPLVKVEKEEPLDDYDNVAMAVAVGPTELEQKPSLEHGTTSVIRMASTAAATTSATAPGVSPEDLTQPPTMKVEVEPTTLLPQRFSTPAQQRGPKKLVIKPKATAPATATTTKKTDTPSSSSSNPSISRDLVQVKSETLEAPAPSSSSSILEKHLTTSRKLLQHHSTVNDDDARVLLEFANSKQPPPLATSSTTFVVNASTGFPSAGSVFASSSSGCSKAPAKPGDEYILPDNNVDVDEIVISSSSSYTSSAAQVQATLQPPDFNFLYHQTTTTATTATYFNPFSRQQHHQQQQHHQHQQHGVSDATNAATLASSSSNSMDHDSMNATFRVAKTQSLQWYQQEQEHDPQNQGGVESGTATPSNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDACKREQLSSSSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPEWRQDYYPAQDLSAQQREQKRFDFNAVDDEASSSSRKSHLTDVVPTAATSSASTSSALLAGPPIASTSRAAAEAAAEAAALAQRKPPRRKLYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVSASMLPPQQQMILQAGEGVHEDSKDGIVKIKQEQCQEKQDVEHMHAHSEMLADVKDSELLGIGGDGDGDVDGDIKPPSQLDEKPTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00529734;
- 90% Identity
- iTF_00529734;
- 80% Identity
- -