Dtak009066.1
Basic Information
- Insect
- Drosophila takahashii
- Gene Symbol
- -
- Assembly
- GCA_018152695.1
- Location
- JAECXN010000119.1:9787151-9797394[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.01 0.63 10.4 0.3 1 23 1271 1294 1271 1294 0.95 2 13 7.2 4.5e+02 1.4 0.2 1 23 1445 1467 1445 1467 0.91 3 13 0.00016 0.01 16.1 2.7 2 23 1470 1491 1470 1491 0.97 4 13 6.2e-05 0.0038 17.4 0.2 3 23 1499 1519 1497 1519 0.98 5 13 5.2e-07 3.2e-05 23.9 4.1 2 23 1526 1547 1525 1547 0.97 6 13 4.9 3e+02 2.0 0.4 5 23 1560 1578 1558 1578 0.96 7 13 1.2 75 3.9 5.4 3 23 1585 1606 1583 1606 0.93 8 13 0.13 8 6.9 0.2 2 23 1617 1637 1616 1637 0.96 9 13 0.00013 0.0082 16.4 0.3 1 19 1643 1661 1643 1665 0.95 10 13 3.1e-05 0.0019 18.3 0.4 1 23 1673 1695 1673 1695 0.98 11 13 9.3e-05 0.0057 16.8 7.6 1 23 1701 1723 1701 1724 0.96 12 13 0.0002 0.012 15.8 6.5 1 23 1729 1751 1729 1751 0.98 13 13 0.0024 0.15 12.4 6.1 1 23 1757 1779 1757 1780 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGTGTCCAGTGCCCCGTGTGCACTTTGTACCTGCACGCGGGCATGAATCTCTCCGATCACTTGGAGACGCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTGCAGATGACGATCGTCGGGAGCGGTGGCAACAGCATGGGCAGTGTTCTGGCCGCCGCCATGCTGGCAGGAGGATCAGGAGGTGGATCGAGTGGTGGTGGCGAAGCCAGCAGTGCGGCGGCTGACGAGAAACCAGCCGTCTTATCACCGCCTTCTGGTGGCGATGTCAAACCAGTTGTGGCCAATACCATATCAGCGGCGCCTGTGGTGCCGGCAGCACCGCCACCGCTCTCCTCCTCCCTCGGAGCCGCCTCTTCCACAACCAGCTCCACGCCCACCTCCCCCTCCGCAAGCAGCAGCAGCAGCAAACTGAGCAATCCACCGATGAAAGCACTGAAATGCGCACCGCCCACGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACGAGCAGCGTGTCCACCTTGTACCAGCCAGCGCAGGTCACTCCGGACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAGCTTTGCCCCCACCTCCGCCGTTGCAGCTATTCACGCAGCAGCAGCAACATCCGACGGTTGCCCCATCGCAAACACAGCAGCAGCAATCGCACCAGAAACCACCTCCCGCCTACGGAGCAGCCATCAGTCAAATACGATCTCAGCACAACCAAAACAAGCAGCAGCCGCAGCCACAGCCTCAAAACGTGGCCATGCAGCATAATAACCTAGCCCTGGCACCACCGACTTCTACTGGCAAGCAGCCGCCCAGTAAGCCGCATACGGAAGTATTCCTGAATCCCCCACCACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTACGGGTCAGGCTGCAGTTCCTCCTCCAGCAACATCCCCTCCACCTCGGCATCTGCATCTGGACTTCGGGTGAATCGTCAGACCAACTCGCCCTTTGGAGCGCTGCTCAATGCTGCGGCGGCTGCGGCCTGCGCCTCGCCAGCCTCCTCCAGCGCATCCTCTTCAGTCCTGCGCTTTGCGGAGTCACCAGTGGCCCACTATTTAGAGCGTGAGAACGGTGACTTTATTGTCCAGGAGACGCCAAAGCATATTGTCGAGTGTGTGGAAAAGGAGGACGGCGAGTTCTCCGTAATCGAGCGCATTTACCAATCCCCGCCGAGCGTTTTGCACATACACGATGACGATGAGGACGACGAAGAGGATGAAGAGGAGGAGGAGGACGACGACCATGAAGCTCCCCCGGAGGAGGATGACGGCGACGATGAGCGGGAGGAGAACAGCCACAGCCGCAGTAATGTGAGCAAAACAACGAAAAAGGCTCGCAAGACGAAGCCCAAGCGAAGCTCCAAGCGGGTATCCGACGAGGAGGAGTTTATGAGCCTGAGCAGCGGATGCGAAAGTGAGCTGGAAAGGGAGCGCAAGCAGGAGCAGCCCAATGCGACGGCGGCTCCTCTACCGCCTCCTTTGTGCACTGCTCCTTCTACGAGCACCGCTGGAGCTTCCTTCGCTTCCTCCTCGAATCTGGCGGATAATCATTCCAATTCCGCTTCCAACTCCGCCTCCAATTCAAACTCCACCACCACGAAATCCAAGAAGAATCGCATCACCGTGCTCAGCGATGTGCCGCTCAATATGAATGAGTATCTCGATTTGATGGGCAACATAGTGGCCTCCAGTCGGAGTATTGGGGCAGGTCGTCCCTTTGCCGCCGTGGCTCCCATTCCACTCGTCAAGGTGGAGAAGGAGGAGCCCCTGGACGACTACGATAGTGTGGCGGTGGCAGTGGCTCCGACTCCCACTGAACTGGAGCAGAAGCCCAGCTTGGAGCACGGCACCACCAGCGTGATTCGCATGGCTACCGCGACTGGAGTGTCTCCCGAGGATCTCACCCAGCCGCCGACGATGAAGGTCGAGGTGGAGCCCACCACATTGCTGCCGCAGCGCTTCTCCACTCCCGCCCAGCAGCGCGGGCCCAAGAAATTAGTCATCAAACCAAAAGCAACAGCGACAGCGACGACAACGAAAAAGACTGACACCCCATCTTCCTCCAGCAGCAGCAGCAACCCATCCATATCAAGAGATCTGCAGGTGCAGGTGAAGAGTGAGACTGTGGAGGCTCCAGCGCCCAGCAGCAGCAGCATTCTGGAGAAGCACCTGACCACCAGCCGCAAACTGCACTCGGCGGTCAACGATGACGACGCACGGGTGCTGTTGGAGTTTGCCAACTCGAAGCAGCCGCCGCCACTGGCCACCTCGAGCACGACGTTCGTAGTGAATGCCAGCACCGGCGGCTTCCCCTCGGCGGGATCTGTGTTCGCCAGCAGCAGCAGCAGTAGTGGCTGCTCCAAGGCACCGGCCAAGCCGGGCGATGAGTACATCCTGCCGGACAACAATGTGGATGTGGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACAACTCCTCAGCGGCCCAGGTGCAGGCCACGCTGCAGCCGCCGGACTTGAACTTTCTGTACCACCAGACCAGCACCACCACGGCTACGACGGCCACCTACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGGCCACCTTGGCTTCGTCGTCCAGCAATTCAATGGATCACGACTCAATGAATGCAACATTCCGGGTGGCCAAGACGCAGTCGCTGCAGTGGTACCACCAGCAGGAGCAGGAACACGATCCGCAGAACCAGGGCGGCGGCGTGGAATCGGGAACAGCCACTCGCTCCAATCAGAGCCAAGATGTGGTCAGCCACCAGCCCACCAATTTCAATGCCGCTCTGGCGGCCGTCGATTGCTGCAGCGTTGCTTTGGATGAGGATGCCAAGTATCTGGACCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGTAGCAACCTTCCCTCGGCTTCCGCCTCCACCACGTCGTCCTCGTTCGCAGGCGCCGGCACGGAGAGCAGTCTGGTTGGTGGCCTGAACATCCGCACGGATGAGAAGATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGCGACATTGAGAACTCCTGGAGTGAGTCGGTTTACGGGGATATTTCGCAGCGGTACTTCAGGAATCAGTTTTCTGGAGGCTACAACCCCGACTGGCGACAGGATTACTACCCGGCCCAGGATCTCAGCGGCCAGCAGAGGGAGCAAAAACGTTTCGACTTTAATGCGGTTGACGATGAGGCCTCGTCCAGCTCACGAAAGAGTCACCTAACAGATGTCGTCCCAACTGCGGCCACCTCCTCCGCGTCCACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACATCGCGGGCTGCCGCAGAGGCGGCAGCGGAGGCGGCTGCTCTCGCTCAACGGAAGCCGCAGCGCCGCAAGCTCTACAAGTGTCCCCACTGCGAGGCGATCTTCGAGAAGCTGAAAGAGCGCAATGCGCACATGATTGGCGAGCACAACTACGTGCGTCAGAACCGCCGGCTCATCTGCACTCAGCCGCAGGTCAGCGCCTCGATGCTGCCGCCGCAACAGCAGCAGATGATCCTGCAGGCAGGCGAGGGTGTACACGAGGACTCCAAGGATGGCATAGTCAAGATAAAACAGGAGCAGTGCCAGGAAAAGCAGGATGTGGAGCATATGCACGCCCATTCCGAACTGCTGGCGGATGTCAAGGACTCGGAGCTGCTGGGCATCGGTGGTGGCGATGGTGATGGGGATGTGGACGGCGACATTAAGCCACCCAGCCAGTTGGATGAGAAGCCCACGCTGCCGCCGCTGGCCATGACAACGCCGGCTGCCAAATTGGCCGCCTTGTATCGCATGCTCATCGCCTACAACGAGTCCAAGCTCGGCCAGGAGCGCAACAATCTCAGCGAACTCGAGCAGAAGGCCATGGAGAAGTCGATCTTTCTGTGCTACGTTTGCCGCACGGACTTTCCATCCGTCAAACTCTACGACGCTCATCTCACCGAGCATCCTGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTTTCATTGCACCTCAAACGACACTTGGGCTGGAAGGAGTTTGGATGCTACGTCTGCGACAAGAAGTTCGTGGTGCGCAGCGCCCTCGTTGAGCACATGCGAATGCACACGGGCCAAACGCCACTCAAGTGCAAGATATGCGGTAAAAAGTTCAAGCGCTACTCGAATCTGACGCAACACCGCAAGCGGCACACCAAGATGATGGTGCGCAAGAAGGAGTACGTGTGCCACTGCGGCGAAGTGCTGCCCTCGAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACCTGAAGCCCAAGTGCTGTCCCTACTGCTGCGATCGGTTCGTGCACGCCAACTCGCTGCGCCGACACATCCGGCTGGCCCACTCCGACAAGTTCGACTACGCCGAACCGATGGAGTGCCCCATGTGCAAGCAGATCTTCGCCAAGACGTCGATCAAGGCGCACATGGCGACGCACTCTACGGAGCCGCAGTACGACTGCGCCATTTGCAGCAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTCCACGCCAACCGGACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCCAAGGCGTTCGTGCGGGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTATACGTGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTACATGAGGCATCGGCGCGAGCATCACGGCACCAAGAAGTTCACCTGCGACCAGTGCGACAAGTCCTTCCATCGGCACTACTATCTGATCGAGCACCGGCGCATGCACACCGGCGAGCGGCCATTCACCTGCACCATCTGCGGCAAGAGCTCCACCACGAAGACCAACCATAACAAGCATCTGAAGATCCACCATTCGCGCGATCCGTTCACCGTGGAGGCCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGNSMGSVLAAAMLAGGSGGGSSGGGEASSAAADEKPAVLSPPSGGDVKPVVANTISAAPVVPAAPPPLSSSLGAASSTTSSTPTSPSASSSSSKLSNPPMKALKCAPPTTEARANTSAHPTTSSVSTLYQPAQVTPDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALPPPPPLQLFTQQQQHPTVAPSQTQQQQSHQKPPPAYGAAISQIRSQHNQNKQQPQPQPQNVAMQHNNLALAPPTSTGKQPPSKPHTEVFLNPPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYGSGCSSSSSNIPSTSASASGLRVNRQTNSPFGALLNAAAAAACASPASSSASSSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEEDEEEEEDDDHEAPPEEDDGDDEREENSHSRSNVSKTTKKARKTKPKRSSKRVSDEEEFMSLSSGCESELERERKQEQPNATAAPLPPPLCTAPSTSTAGASFASSSNLADNHSNSASNSASNSNSTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRSIGAGRPFAAVAPIPLVKVEKEEPLDDYDSVAVAVAPTPTELEQKPSLEHGTTSVIRMATATGVSPEDLTQPPTMKVEVEPTTLLPQRFSTPAQQRGPKKLVIKPKATATATTTKKTDTPSSSSSSSNPSISRDLQVQVKSETVEAPAPSSSSILEKHLTTSRKLHSAVNDDDARVLLEFANSKQPPPLATSSTTFVVNASTGGFPSAGSVFASSSSSSGCSKAPAKPGDEYILPDNNVDVDVDEIVISSSSSYNSSAAQVQATLQPPDLNFLYHQTSTTTATTATYFXXXXXXXXXXXXXXXXXXXXXXXXXXAATLASSSSNSMDHDSMNATFRVAKTQSLQWYHQQEQEHDPQNQGGGVESGTATRSNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDACKREQLSSSSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSGQQREQKRFDFNAVDDEASSSSRKSHLTDVVPTAATSSASTSSALLAGPPIASTSRAAAEAAAEAAALAQRKPQRRKLYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQVSASMLPPQQQQMILQAGEGVHEDSKDGIVKIKQEQCQEKQDVEHMHAHSELLADVKDSELLGIGGGDGDGDVDGDIKPPSQLDEKPTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00529734;
- 90% Identity
- -
- 80% Identity
- -