Dsan009372.1
Basic Information
- Insect
- Drosophila santomea
- Gene Symbol
- -
- Assembly
- GCA_016746245.1
- Location
- NC:3349103-3357986[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0086 0.55 10.4 0.3 1 23 1255 1278 1255 1278 0.95 2 13 6.2 3.9e+02 1.5 0.2 1 23 1425 1447 1425 1447 0.91 3 13 0.00014 0.0087 16.1 2.7 2 23 1450 1471 1450 1471 0.97 4 13 5.3e-05 0.0034 17.4 0.2 3 23 1479 1499 1477 1499 0.98 5 13 4.4e-07 2.8e-05 23.9 4.1 2 23 1506 1527 1505 1527 0.97 6 13 4.2 2.7e+02 2.0 0.4 5 23 1540 1558 1538 1558 0.96 7 13 1 66 3.9 5.4 3 23 1565 1586 1563 1586 0.93 8 13 0.11 7 7.0 0.2 2 23 1597 1617 1596 1617 0.96 9 13 0.00011 0.0071 16.4 0.3 1 19 1623 1641 1623 1645 0.95 10 13 2.7e-05 0.0017 18.3 0.4 1 23 1653 1675 1653 1675 0.98 11 13 7.9e-05 0.005 16.9 7.6 1 23 1681 1703 1681 1704 0.96 12 13 0.00017 0.011 15.8 6.5 1 23 1709 1731 1709 1731 0.98 13 13 0.002 0.13 12.4 6.1 1 23 1737 1759 1737 1760 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGTGTCCAATGCCCCGTGTGCACATTGTACCTGCATGCGGGAATGAATCTCTCCGATCACTTGGAGACCCATCCCAAGGAGCAGGTGATCAAGGCACTGGTGCAGATGACGATCGTTGGAAACTGTGGCAACAGTATGGGCAGTGTTCTCGCTGCTGCCATGTTGACAGGAGGAACTGGAGGTGGATCCAGCGGAGGCGAAGCCAGTGCTGATGAGAAACCGGCCGTCTTATCACCACCTTCTGGCGGCGATGTTAAACCAGTCGTGGTCAATACCATATCAGCTGCAACAGCGCCTGTGCcgccaccagcaccaccgccaCTATCCTCCTCCCTCGTGGCGGCCTGCTCCAACGTAGCCACCTCTTCCACAACCAGCTCCACACCCACCTCCAACTCCgcaagcaacagcagcagcagcaaaccgAGCAATCCACCGATAAAAGCACTGAAATGCGCACCGCCCACGACTGAGGTGCGAGCCAGCTCATCCGCTCATCCCACCACGAGTAGCGTGTCCACTTTGTACCAGCCGCAGGTCACTCCGGATTATCGCttcaaccagcagcagccgtCACAGACGACGGGCTTTGGGCGTGGTGTCACCGCCTCAACAGCCGCGCTGGTAATTCCGCAGGTGCCTCAGCAGCACTTCCTCGCGAGCCATCAACAGCAGGCTCACTTTTCACATCAGCAGCCCCCGCAGCAAcagaatcagcagcagcagcatcagcctGCTCTGAAGTTCAGCTACGCCACAGCTTTGCCCCCACCTCCGCCGTTGCAGCTATTTacgcagcaacagcagacgGTTACTCCACCGCAGACCCAGCAGCAATCGCACCAGAAACCACCTCCCGCCTATGGAGCCGCCATTAGTCAAATTCGATCTCAGcacaaccaaaacaaacagcagcCACAGTCCCAAAGCGTGGCCATGCAACACAACCTAGCCCTGGCACCACCGACGACAGCAGCGGCCTCAACTTCacatgcaactgcagctgtcAAGCAGCCGAGTAAGCCGCAAACGGAAGTATTCCTGAatccgccaccaccgccgccggcaCAGCAACAGGTGCAGATCCACAATTTAGTGCAAAATCAGGGTCAACACCATCAGCTTCCTCAGTCGCAGCAGCCGAGCCAACAGAGTCACCAACAGCTACCGAACTTGCCGACCTACGGCTTAGGGGCCAGCAGTAGCTGCAGTTCCTCCAACAACCCCTCGACCTCGGGATCTGGTCTACGTTCGAATCGTCAGACAAACTCTCCGTTTGGAGCACTGCTTAATGCTGCAGCGGCAGTGGCCTGTGCATCGCCAGCCTGTTCCACCACCTCATCTTCGGTATTGCGGTATGCGGAATCACCGGTGGCACACTACCTTGAGCGAGACAATGGTGACTTCATTGTCCAGGAGACGCCGAAGCATATAGTTGAATGTGTGGAAAAAGAAGACGGCGAGTTCTCCGTGATCGAGCGCATTTATCAATCCCCGCCGAGTGTTCTGCACATacacgatgatgatgaggatgacgAGGATGAAGAGGAGGAAGACGAGCATGAAGCGCCACCCGAGGAAGAAGACGGGGACGATGAGCGGGAGGAAAACAGTCACAGCCTTAATATGAGCAAGACAACGAAAAAGGCCCGTAAGACAAAGCCGAAGCGAGGCTCCAAACGCACGTCGGACGAGGAGGAGTTCATGAGCCTTAGCAGCGGATGTGAGAGTGAGATGGAAAAAGAGCGTAAGCAGGAGCAGCCAAATGCCGCGGCATCACTACCACCTCCATTGTGCACGGCTCCTTCTACGAGTGCTGCTGGAGCTTCTACCTCCAATCTGGCGGACAATCATTCCAATTCCGCGTCCAACTCCGCCTCCAATTCTAACTCCACCGCCACTACAAAGTCCAAAAAGAATCGAATTACTGTACTGAGCGATGTTCCGCTTAATATGAATGAGTACCTAGATTTGATGGGCAACATTGTGGCCTCCAGTCGTATTGGGGCAAGTCGACCGTTTGCCGCTGTGGCTCCCATACCACTCGTCAAGGTGGAGAAGGAAGAGCCCTTGGATGATTACGACAACGTAGCATTGCCTGCTAATGCCGATCTGGAGCAAAAGCCCAGTCTTGAGCACGGCACTACCAGCGTCATTCGAATGGCAAGCACGGCTGCAGCACCTAGTTCAGCAACGGCGACTGAAGTGTCTCCCGAGGATCTCACACAGCCGCCGCCCATGAAAGTCGAGGTCGAGCCCACCACTACATTGTTACCGCAGCGCTTCTCAACTCCCGCTCAGCATCGTGGGCCTAAGAAATTAGTCatcaaaccaaaacaaacagcacCAGCGAATGCGACGACAACAAAAAAGACTGACAGCCCATCTTCCCCCAGCAACAACCCATCCATATCAAGAGATCTGGTGCAGGTAAAGAGTGAAACCGTGGAGGCGCCAGCGCCgagcagtagcagcagcattCTGGAGAAGCACCTGACCACCAGCCGCAAACTGTTGCATCACCACTCGGCGGTGAACGACGACGATGCCCGGGTGCTGTTGGAGTTTGCGAACTCGAAACAGCCGCCGCCACTGGCCGCATCCAGCACCACTTTCGTGGTAAATGCAAGTGCAGGTTTTCCCTCGGCGGGATCAGTTTTCGCCAGCAGCAGTAACAGCTGTTCCAAAGCACCGGCCAAGCCGGGCGAGGAGTACATCCTGCCGGACAACAACATGGACGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACACCTCCTCAGCAGCCCAGGTCCAAAACACGTTACAGCCGCCGGACTTTAACTTTCTGTACCACCAGGCCACTACCACGGCCACGACGGCCACATACTTCAATCCCTTTTCCaggcagcagcatcatcatcagcagcagcacggGGTTAGCGATGCCACCAATGCGGCCACTTTGGCTTCGTCGTCCAGCAATTCAATGGACCACGACTCGATGAATGCTACATTCCGGGTGGCCAAGACCCAATCGCTGCAGTCATGGTACCAGCAAGAGCCAGAGCACGATCCACAGAATCAGGGTGGTGCGGAATCAGGAACAGCCACTCCCAATCAGAGCCAGGATGTGGTCAGCCACCAGCCCACTAACTTTAACGCTGCTCTAGCGGCCGTCGATTGCTGTAGCGTTGCTTTGGACGAGGATGCAAAATATCTTGACCTGGACGCCTGCAAGCGGGAGCAGCTGAGCAGCAGTAGCAACCTGCCCTCCGCTTCCGCGTCCACAACGTCGTCGTCGTTTGCTGGTGCTGGCACGGAAAGCAGTTTGGTGGGTGGTCTGAATATTCGCACCGATGAGAAGATGCCCGCTAAGGGTGAAATCTCCGAACAAGAAAGCAACTGCGACATCGAGAACTCCTGGAGTGAGTCGGTTTATGGGGACATTTCGCAGCGCTATTTCAGAAACCAGTTTTCTGGCGACTATAACCCTGATTGGCGGCAGGACTATTATCCGGCTCAGGATCTCAGCGCGCAGCAGAGGGAGCAAAAACGTTTTGACTTTAATGCTGTGGATGATGAGGCTTCATCTAGCTCGAGAAGGAGTCATCTGGAAGATATCCTCCCGACAGCGGCCACCTCCTCTGCATGTACGTCAACGGCTATGCTGGCGGGTCCACCAATAGCTTCGACATCACGGGCTGCTGCTGAGGCGGCAGCGGAGGCGGCTGCTTTTGCCCAGCGGAAACCGCAGCGTCGCAAGCTCTACAAGTGTCCTCACTGCGAGGCAATTTTCGAAAAGCTTAAAGAGCGCAATGCGCACATGATTGGCGAGCACAACTACGTGCGGCAAAATCGGCGTCTTATTTGCACTCAGCCGCAAATCAATACTTCGATGTTACCCCCACAGCAGCAGATGATACTGCAGGGTGGTGAGGTTGAGGATTCCAAAGATGGCATTGTGAAGATAAAACAGGAGCAGTGCCAGGAAAAGCAGGATGTTGAACAAATGCGCGACCATTCCGAACTTTTGGCTGATGTCAAGGACTCGGAGCTGATGGGCATCGGCGGTGATGGTGACTGTGATGTGGATGATGACATTAAGCCACCCAACCAGCTAGATGAAAAGCCGACGCTGCCGCCATTAGCCATGACGACGCCAGCAGCTAAATTAGCAGCTTTGTATCGAATGCTCATCGCCTACAACGAATCCAAGCTCGGACAGGAGCGCAACAACCTTAGTGAGCTGGAGCAGAAGGCTATGGAAAAATCCATATTTCTTTGTTATGTCTGTCGTACCGATTTCCCGTCCGTAAAGCTCTATGACGCCCATCTCACCGAGCATCCCGCTGAATGCTTCACTTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTCTCCTTGCACTTAAAGCGGCACTTGGGCTGGAAGGAGTTTGGATGCTACGTCTGCGACAAGAAGTTCGTGGTGCGCAGCGCCTTGGTCGAACACATGCGGATGCACACGGGGCAAACGCCTCTCAAGTGCAAGATATGCGGCAAAAAGTTCAAGAGATACTCGAATCTGACGCAACACCGCAAGCGCCACACGAAAATGATGGTGCGCAAAAAGGAATACGTGTGCCACTGCGGTGAAGTCTTGCCCTCGAAGGCCCGCTTCCTGTGGCACAAGGAAACGCACGACCTGAAGCCGAAGTGCTGTCCGTACTGCTGCGATCGGTTTGTGCACGCCAACTCGCTACGTCGTCACATACGGCTGGCCCACTCTGATAAGTTTGACTACGCCGAACCTATGGAATGCCCCATGTGTAAGCAGATCTTCGCAAAGACGTCCATCAAGGCGCATATGGCGACGCATTCAACGGAGCCCCAATACGATTGCGCAATTTGTAGCAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTACACGCCAACCGGACGGCGAAGCCCTTTAAGTGCGAATACTGCCCAAAGGCATTCGTGCGAGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTTATCCGCAAGTACAACTACATGCGACATCGACGCGAACATCACGGCACCAAAAAGTTTACCTGCGACCAGTGCGATAAGTCTTTCCATCGACATTACTATCTGATAGAGCACCGGCGAATGCACACCGGAGAGCGTCCGTTCACGTGCACCATCTGCGGCAAGAGCTCCACAACCAAGACCAATCACAACAAGCATCTGAAGATCCACCATTCGCGCGATCCGTTCACGGTGGAGGCCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNCGNSMGSVLAAAMLTGGTGGGSSGGEASADEKPAVLSPPSGGDVKPVVVNTISAATAPVPPPAPPPLSSSLVAACSNVATSSTTSSTPTSNSASNSSSSKPSNPPIKALKCAPPTTEVRASSSAHPTTSSVSTLYQPQVTPDYRFNQQQPSQTTGFGRGVTASTAALVIPQVPQQHFLASHQQQAHFSHQQPPQQQNQQQQHQPALKFSYATALPPPPPLQLFTQQQQTVTPPQTQQQSHQKPPPAYGAAISQIRSQHNQNKQQPQSQSVAMQHNLALAPPTTAAASTSHATAAVKQPSKPQTEVFLNPPPPPPAQQQVQIHNLVQNQGQHHQLPQSQQPSQQSHQQLPNLPTYGLGASSSCSSSNNPSTSGSGLRSNRQTNSPFGALLNAAAAVACASPACSTTSSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEDEEEEDEHEAPPEEEDGDDEREENSHSLNMSKTTKKARKTKPKRGSKRTSDEEEFMSLSSGCESEMEKERKQEQPNAAASLPPPLCTAPSTSAAGASTSNLADNHSNSASNSASNSNSTATTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGASRPFAAVAPIPLVKVEKEEPLDDYDNVALPANADLEQKPSLEHGTTSVIRMASTAAAPSSATATEVSPEDLTQPPPMKVEVEPTTTLLPQRFSTPAQHRGPKKLVIKPKQTAPANATTTKKTDSPSSPSNNPSISRDLVQVKSETVEAPAPSSSSSILEKHLTTSRKLLHHHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASAGFPSAGSVFASSSNSCSKAPAKPGEEYILPDNNMDVDEIVISSSSSYTSSAAQVQNTLQPPDFNFLYHQATTTATTATYFNPFSRQQHHHQQQHGVSDATNAATLASSSSNSMDHDSMNATFRVAKTQSLQSWYQQEPEHDPQNQGGAESGTATPNQSQDVVSHQPTNFNAALAAVDCCSVALDEDAKYLDLDACKREQLSSSSNLPSASASTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGDYNPDWRQDYYPAQDLSAQQREQKRFDFNAVDDEASSSSRRSHLEDILPTAATSSACTSTAMLAGPPIASTSRAAAEAAAEAAAFAQRKPQRRKLYKCPHCEAIFEKLKERNAHMIGEHNYVRQNRRLICTQPQINTSMLPPQQQMILQGGEVEDSKDGIVKIKQEQCQEKQDVEQMRDHSELLADVKDSELMGIGGDGDCDVDDDIKPPNQLDEKPTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00529734;
- 90% Identity
- iTF_00539841; iTF_00504870; iTF_00619331; iTF_00608055; iTF_00592572; iTF_00543230; iTF_00596835;
- 80% Identity
- -