Datr003845.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila atroscutellata
Gene Symbol
sip1
Assembly
GCA_035041605.1
Location
JAWNLA010000092.1:8759134-8761847[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-90 2.6e-86 289.6 15.9 3 275 430 705 428 705 0.97
2 2 0.25 2.1e+03 -2.1 0.0 245 269 720 744 711 760 0.49

Sequence Information

Coding Sequence
ATGTCGGACAATGAATATGAGCGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGACCACGTCGTCGTCAAACCAAACATCAGCAAATCTACGgCATTTGGGCCGATGACAGTGATAATGAGAGCGAGGGAGAAGTCAGTGGTCGACGTGGCGGTAGGCGTGGCCTGGGCGGCGGAGCTGCCGGCAAAGCAAAGGACTACACGGCGCCCGTTAATTTCGTTGCCGGCGGCATTCAACAATCTGGCAAACAGCCAAAGAAaaagcagctggaggagggCTCCACCAAAGATGAGGCTGCTTCTGGGGAGTCGGAGGACAGCGACGGCAACGAGCCACGTCCATCGTTTGGGGgaaagcagccgcagctgatGGACAACGAGGATTACAGCTCGAATAGCTCCGATAGTGCAGATAATaagagagagcagcagcagcagatgcggTCCCGGAACATTGCTGGTCTGCGTCACAAGTCGCACATTGCAAGCGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGTATTGGcgccaagctgctgctgcagatgggCTATGAGCCGGGCAAGGGATTGGGCAAGGATCTGCAGGGCATCCAGCAGCCAGTGCAGGCGCATGTGCGCAAGGGCAGAGGTGCCATCGGTGCCTACGGACCCGAGACGGCGGCAAGCATTGGCGGCCAGGCAAAGCCACCGAAAGAAGACGACGACATCAAGGAGGCCAGGGAGTTCAAGGAGCAGCTGACCAAGTGGAAGAAAGTCGGCGTTGAGCCGCGTGAGAAGTCTGGCAAACAGCAGCGCTACTACTATAAATCCGTTGAGGAAGTCATTGCCAAGAGTCTCAAGGACAACCACTTGCTACCCGAGAAGCTGGCCAAGCAGCTGGGCAATGTGCCCGTCATCGACATGACCGGACCGGAGCGACGCGTCCTCAGTGGCTATCATGCCTTGGCCCAGAGCAAGATCACGCCTGAGGAGACTCTCTACGATGAGCACCTGCCGTCGGGCGGAGGAAAGAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGTTGGTTAGCCAATGCGAGCAGGAGATCATTGACATCGACAAGGCGAAGCGGGAGGGCCATGATCTGTATGCATCGCTGGAGCAcgagcatcagcagctgctggaacTGGTGAGTCTGGAGCGCAATCACATGAATACTTTGGAGCAGGTGCTCGCTCGTGTCGATCAGCTCAGCGAGAATCCGGAATTGACCATGTCGCAGGCGGAGGAGCTATTTCTCGACCTGCAGCGCGACTATCCTGCCGAGTTTGAGGAGTTTGGCATGGAGGATATGGCTGGAGGCGTCATTGCTCCATTGCTACGGCGGGAACTAGTTGATTGGCGCCCGCTGGAGAAGCCCATGCAGCCGGTGGAGATGATAAAGCGTTGGCGCAACATATTGCAAAAGGATGAGGATGCGCCGGCATcgttggagcagctgcagctgcggcaaTCCCGCAACGTTTTTGATCCATACTCCTCGCTCATCTGGGTCGGGGTGATGCCGTCGATTCGTACGAGCGCACTCAACTGGCAGCCCAAGGAGCATGCATCGATGGCCGCCTTGCTGGACGCATGGGCGCCAGTGCTGCCCACGTGGGTATTGGACTCGGTGCTGGAAAAACTGGTGTTGACCCGGCTGAAGATTGGCGTTCGCGACTGGGATCCACTGACGGATACGGTGCCCATTCATATTTGGATTTTGCCATGGCATGGACTGCTGGGTGAGAAGCTGGAGGAGTCTGTGTATCCGCAGATACGCAGCAAACTGGGTGTGGCATTGGAGGCTTGGTCACCACAAGATCGGTCCGCACGGGCCATGCTCACCCCTTGGCAGACGGCGTTTCCCGAGGAACAGATGCTGCAGTTCCTGCTGCGTCACATTATACCCAAACTGCAGGCTGTACTCGCCGAGTTCATCATCAATCCGCTGCAGCAGGACTTGGAGCTGTGGCATCAGGTGTGGGAATGGCATGAACTAATACCAGCCGCCCACATGGCCCAGCTGCTTGACAAGTATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGGCCATCTTACGCGAGCCCTGCATCAAAGAGCATCTGCGTCGCGCCCTCGACATGCTGCACCGCGCCACGGATGCGGTCCTACAACCCACTTCGGCCCCACCACCGCCCATGCCACCAGCGCCCGCTCCTGTGCTTCTCGCTCCCGTAATGCTCATAGATGTGGCTGCGCCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCACAGAAATGCGCCGAACTGGGCATCATATTCGCCCCATTGCCAGGACGACGCGAACTGGGTAAACAGATTTATCGAGTGGGGAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGTCAGCTTTCAGAGCTGGCAACCTGTGGCCCTCAATCAGCTCCTGGAGCGTGCCCAAACTGGCCTCATCTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEVSGRRGGRRGLGGGAAGKAKDYTAPVNFVAGGIQQSGKQPKKKQLEEGSTKDEAASGESEDSDGNEPRPSFGGKQPQLMDNEDYSSNSSDSADNKREQQQQMRSRNIAGLRHKSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPPKEDDDIKEAREFKEQLTKWKKVGVEPREKSGKQQRYYYKSVEEVIAKSLKDNHLLPEKLAKQLGNVPVIDMTGPERRVLSGYHALAQSKITPEETLYDEHLPSGGGKSSPISVFSMPELAHNMSLLVSQCEQEIIDIDKAKREGHDLYASLEHEHQQLLELVSLERNHMNTLEQVLARVDQLSENPELTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELVDWRPLEKPMQPVEMIKRWRNILQKDEDAPASLEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHASMAALLDAWAPVLPTWVLDSVLEKLVLTRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEESVYPQIRSKLGVALEAWSPQDRSARAMLTPWQTAFPEEQMLQFLLRHIIPKLQAVLAEFIINPLQQDLELWHQVWEWHELIPAAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLIDVAAPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFQSWQPVALNQLLERAQTGLI