Dtan001432.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila tanythrix
Gene Symbol
sip1
Assembly
GCA_035043275.1
Location
JAWNNC010000165.1:264396-267118[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.5e-56 9.4e-52 176.4 2.0 3 188 431 619 429 626 0.95
2 3 8.6e-18 8.5e-14 51.9 3.8 223 275 626 678 621 678 0.96
3 3 0.24 2.4e+03 -2.0 0.0 245 269 693 717 684 733 0.49

Sequence Information

Coding Sequence
ATGTCGGACAACGAATATGAACGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGACCACGTCGTCGTCAAACCAAACATCAGCAAATCTACGGCATTTGGGCCGATGACAGCGATAATGAGAGCGAGGGAGAAGCCAGCGGTCGACGTGGCGGTAGGCGTGGCTTGGGTGGTGGCGCTGCTGGCAAAGCAAAGGACTACACGGCGCCCGTTAATTTCGTTGCCGGCGGCATTCAACAAGCTGGCAAACagccaaagaagaagcagctggaggaggGCTCTGCCAAAGATGAGGCTGCCTCTGGTGAGTCGGAGGACAGCGACGGCAACGAGCCACGTCCATCGTTTGGGGGAAGGCAGCCGCAGCTGATGGACAACAACGAGGACTACAGCTCGAATAGCTCCGATGGCGCAGATAATaagagagagcagcagcagcagatgcggTCCCGGAACATTGCTGGACTGCGTCACAAGTCACACATTGCAAGCGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGCATTGGcgccaagctgctgctgcagatgggCTATGAGCCTGGCAAGGGATTGGGCAAGGATCTGCAGGGCATCCAGCAGCCGGTGCAGGCGCATGTGCGCAAGGGCAGAGGTGCCATCGGTGCCTACGGACCCGAGACGGCAGCCAGTATTGGCGGCCAGGCAAAGCCACCGAAAGAAGACGATGACATTAAAGAGGCCAGGGAGTTCAAGGAGCAGCTGACCAAGTGGAAGAAAGTCGGCGTTGAGCCGCGTGAGAAGTCTGGCAAACAGCAGCGCTACTACTACAAATCCGTTGAGGAAGTCATTGCCAAGAGTCTCAAGGACAACCACTTGCTACCCGAGAAGCTGGCCAAGCAGCTGGGCAATGTGCCCGTCATCGACATGACCGGGCCGGAGCGACGCGTCCTCAGTGGCTATCATGCCTTGGCCCAGAGCAAGATCACGCCCGAGGAGACACTCTACGATGAGCAGCTGCCATCGGGCGGAGGAAAGAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGCTGGTTAGCCAATGCGAGCAGGAGATCATTGACATCGACAAGGCGAAGCGGGAGGGCCAGGATCTGTATACATCGCTGGAGCACgagcatcagcagctgctggaacTGGTGAGTCTGGAGCGCAATCACATGAACACTTTGGAGCAGGTACTCGCTCGTGTCGATCAGCTCAGCGAGAATCCGGACTTGACCATGTCGCAGGCGGAGGAGCTGTTTCTCGACCTCCAGCGCGACTATCCCGCCGAGTTTGAGGAGTTCGGCATGGAGGATATGGCTGGTGGCGTGATTGCTCCATTGCTGCGGCGGGAACTAGCTGATTGGCGTCCGCTGGAGAAGCCCATGCAGCCGGTGGAGATGATAAAGCGTTGGCGCAACATATTGCAAAAGGATGAGGATCAGGCGCCGGCATCgttggagcagctgcagctgcggcaATCCCGCAACGTTTTCGATCCGTACTCCTCGCTCATCTGGGTCGGGGTGATGCCGTCGATTCGTACGAGCGCACTCAACTGGCAGCCCAAAGAGCATGCATCGATGGCCGCCTTGCTGGACGCATGGGCCCCAGTGTTGCCCACGTGGGTGTTGGACTCGGTGCTGGAGAAACTGGTGCTGACCCGGCTGAAGATTGGCGTCCGCGACTGGGATCCATTGACGGATACGGTGCCCATTCACATTTGGATTTTGCCCTGGCATGGACTGCTGGGTGAGAAGCTGGAGGAGTCTGTCTATCCGCAGATACGAAGCAAACTGGTTGCTGCAGTTCCTGCTGAGGCACAGTATACCAAGCTGCAGGCGGTGCTCGCCGAGTTCATCATCAATCCGCTGCAGCAGGACTTGGAGCTGTGGCATCAGGTGTGGGAATGGCACGAACTAATACCAGCCGCCCACATGGCCCAGCTGCTCGACAAGTATTTCTTTCCCCGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGGCCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTCGACATGCTGCACCGCGCCACGGATGCGGTCCTACAACCCACTTCGGCCCCACCACCGCCCATGCCACCAGCGCCCGCCCCTGTGCTTCTCGCTCCCGTAATGCTCATAGATGTGGCTCCACCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCATTGCCAGGACGACGCGAACTGGGCAAACAGATTTATCGCGTGGGAAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGTCAGCTTTCAGAGCTGGCAGCCTGTGGCCCTCAATCAGCTCCTGGAGCGTGCCCAAACTGGCCTCATTTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEASGRRGGRRGLGGGAAGKAKDYTAPVNFVAGGIQQAGKQPKKKQLEEGSAKDEAASGESEDSDGNEPRPSFGGRQPQLMDNNEDYSSNSSDGADNKREQQQQMRSRNIAGLRHKSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPPKEDDDIKEAREFKEQLTKWKKVGVEPREKSGKQQRYYYKSVEEVIAKSLKDNHLLPEKLAKQLGNVPVIDMTGPERRVLSGYHALAQSKITPEETLYDEQLPSGGGKSSPISVFSMPELAHNMSLLVSQCEQEIIDIDKAKREGQDLYTSLEHEHQQLLELVSLERNHMNTLEQVLARVDQLSENPDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELADWRPLEKPMQPVEMIKRWRNILQKDEDQAPASLEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHASMAALLDAWAPVLPTWVLDSVLEKLVLTRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEESVYPQIRSKLVAAVPAEAQYTKLQAVLAEFIINPLQQDLELWHQVWEWHELIPAAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLIDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFQSWQPVALNQLLERAQTGLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00513447;
90% Identity
iTF_00482221;
80% Identity
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