Dgri000809.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila grimshawi
Gene Symbol
sip1
Assembly
GCA_018153295.1
Location
JAECXY010001376.1:14047732-14051083[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-89 3.3e-85 285.8 16.2 3 275 432 708 430 708 0.97
2 2 0.25 1.9e+03 -2.1 0.0 245 269 723 747 714 763 0.49

Sequence Information

Coding Sequence
ATGTCGGACAACGAATATGAGCGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGACCACGCCGTCGTCAAACCAAACATCAGCAAATCTACGGCATTTGGGCCGATGACAGCGACAATGAAAGCGAGGGAGAAGCCAGCGGTCGACGTGGCGGTAGGCGTGGCCTGGGCGGCGGCGCTGCCAACAAAGCAAAGGATTACACGGCTCCCGTCAATTTCGTTGCTGGCGGCATTCAACAAGCTGGCAAACAGCCAAAGAAGAAGCAGCTGGAGGAGGGCACAAACAAAGATGAGGCTCCAGCTGGTGATTCGGAGGACAGCGACGGCAACGAGGCACGTCCATCGTTTGGGGGAAAGCAGCCGCAGCTGATGGACAACAACGAGGATTACAGCTCGGATAGCTCCGATGGTGAAGAGAATAAGAGGGAGCAGCAGCAGCAGCAGATGCGGTCCCGGAACATTGCTGGACTGCGCCACAAATCGCACATTGCAAGTGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGCATTGGCGCCAAGCTGCTGCTGCAGATGGGCTATGAGCCGGGCAAGGGATTGGGAAAGGATCTGCAGGGCATCCAGCAGCCGGTGCAGGCGCATGTGCGCAAGGGAAGAGGTGCCATTGGTGCTTACGGACCGGAGACGGCGGCCAGCATTGGCGGCCAGGCAAAACCCCCGAAAGAAGACGACGACATCAAGGAGGCCAGGGAGTTCAAGGAGCAGCTGACCAAGTGGAAGAAAGTCGGCGTCGAGCCGCGTGAGAAGTCCGGCAAACAGCAGCGCTACTACTATAAATCCGTTGAGGAAGTCATTGCTAAGAGTCTCAAGGACAACCACTTGCTGCCCGTGAAGCTGGCCAAGCAGCTGGGCAATGTGCCCGTCATCGACATGACCGGACCGGAGCGACGCGTCCTCAGTGGCTACCATGCCTTGGCCCAGAGCAAGATCACGCCCGAGGAGACGCTCTACGATGAGCAGATGCCGTCGGGCGGAGGAAAAAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGCTGGTTAACCAATGTGAGCAGGAGATCATTAACATCGACAAGGAGAAGCGGGAGGGCCAGGATCTGCATGCAGCGCTGGAGCATGAGCATCAGCAGCTGCTGGAACTGGTGAGTCTGGAGCGTAATCACATGAGCACTTTGGAGCAGGTGCTCGCTCGTGTCGATCAGCTCAGCGAGAATCCGGACTTGACCATGTCACAGGCGGAGGAGCTGTTTCTCGACCTACAGCGCGACTATCCCGCCGAGTTTGAGGAGTTCGGCATGGAGGACATGGCTGGCGGCGTCATAGCACCATTGCTGCGCCGGGAACTAGCTGATTGGCAGCCGCTGGAGAAGCCCATGCAGCCGGTGGAGATGATAAAGCGTTGGCGCAACATATTGCATAAGGATGAGGATCAGGCGCCGGTATCGGTAGAGCAGCTGCAGCTGCGGCAATCGCGGAACGTTTTCGATCCATACTCCTCGCTTATCTGGGTCGGGGTGATGCCCTCGATTCGGACGAGCGCACTCAACTGGCAGCCCAAGGAGCATGCCGTGATGGCCGCTTTGCTGGACGCATGGGCGCCCGTGTTGCCCACGTGGGTGTTGGACTCGGTGCTGGAGAAACTGGTGCTGACTCGGCTGAAGATTGGCGTCCGCGATTGGGATCCGTTGACGGATACGGTGCCCATCCACATTTGGATTTTGCCCTGGCATGGACTGCTGGGTGAGAAGTTGGAGGAGTCTGTCTATCCGCAGATACGCAGCAAACTGGGTGTGGCATTGGAGGCTTGGTCACCTCAAGATCGGTCCGCCCGGGCTATGCTCACGCCGTGGCAGACGGCATTTCCCGAGGAACAATTGCTGCAGTTCCTGCTGCGTCACATTATACCCAAGCTGCAGGCGGTGCTCGCCGAGTTCATCATCAATCCGCTGCAGCAGGATTTGGAGCTGTGGCATCAGGTGTGGGAATGGCACGAACTAATACCCGCCGCCCACATGGCCCAGCTGCTCGATAAGTATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGGCCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTCGACATGCTGCACCGCGCCACGGATGCGGTTCTCCAACCCACTTCGGCCCCACCACCGCCCATGCCACCAGCGCCCGCCCCTGTGTTGCTCGCCCCCGTAATGCTCATAGATGTGGCTCCGCCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCATTGCCAGGACGACGCGAATTGGGCAAACAGATTTATCGAGTGGGCAAACTATTCTGTTACATCGATCGCAATGTTTGTATGCTGAGCGATAGCAGCTTTCAGAGCTGGCAACCTGTGGCCCTCAATCAACTCCTGGAGCGTGCACAAACTGGCCTCATCTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEASGRRGGRRGLGGGAANKAKDYTAPVNFVAGGIQQAGKQPKKKQLEEGTNKDEAPAGDSEDSDGNEARPSFGGKQPQLMDNNEDYSSDSSDGEENKREQQQQQMRSRNIAGLRHKSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPPKEDDDIKEAREFKEQLTKWKKVGVEPREKSGKQQRYYYKSVEEVIAKSLKDNHLLPVKLAKQLGNVPVIDMTGPERRVLSGYHALAQSKITPEETLYDEQMPSGGGKSSPISVFSMPELAHNMSLLVNQCEQEIINIDKEKREGQDLHAALEHEHQQLLELVSLERNHMSTLEQVLARVDQLSENPDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELADWQPLEKPMQPVEMIKRWRNILHKDEDQAPVSVEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHAVMAALLDAWAPVLPTWVLDSVLEKLVLTRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEESVYPQIRSKLGVALEAWSPQDRSARAMLTPWQTAFPEEQLLQFLLRHIIPKLQAVLAEFIINPLQQDLELWHQVWEWHELIPAAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLIDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFQSWQPVALNQLLERAQTGLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00513447;
90% Identity
iTF_00482221;
80% Identity
-