Ddem007051.1
Basic Information
- Insect
- Drosophila demipolita
- Gene Symbol
- sip1
- Assembly
- GCA_035042405.1
- Location
- JAWNLI010000069.1:2502800-2505507[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-88 8.8e-85 284.5 15.3 3 275 428 704 426 704 0.98 2 2 0.6 5.1e+03 -3.3 0.0 245 269 719 743 713 751 0.62
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAATATGAACGCTTTGAAATAACGGACTACGATTTGGACAACGAGTTCAATATAAATCGACCTCGTCGTCGTCAAACCAAACATCAGCAAATCTACGGGATATGGGCCGATGACAGCGATAATGAGAGCGAGGGAGATGCCAACGGTCGACGTGGCGGTAGGCGTGGTCTGGGCGGCGGCTCTGCCGCCAAGGACTACACGGCGCCCGTCAATTTTGTTGCCGGCGGTATTCAACAAGCTGGCAAACagccaaagaagaagcagctggAGGAGGGTTCCACCAAAGATGAGACTGCTGCTGGTGAGTCGGAggacagcaacggcaacgaaCAACGTCCATCGTTTGGGGGCAAGCAGTCGCAGCTGATGGACAACAACGGGGACTACAGCTCGGATAGCTCCGATGGTGCAGAGAATAAaagggagcagcagcagatgcggTCTCGGAACATTGCTGGACTGCGTCACAATTCGCACATAGCAAGCGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGAATTGGCGCCAAGCTACTGCTGCAGATGGGCTATGAGCCGGGCAAGGGATTAGGCAAAGATCTGCAGGGCATCCAGCAACCGGTGCAGGCGCATGTGCGCAAGGGCAGAGGTGCCATCGGTGCCTACGGACCCGAGGTGGCGGCTAGCATTGGCGGTCAGAAAAAGCCACTAAAAGAAGACGAAGACATAAAGGAGGCCAGGGAATTCAAGGAGCAGCTAACCAAGTGGAAGAAAGGCGGCGTCGAGACGCGTGAGAAGTCTGGAAAACAGCAGCGCTACTACTACAAGTCCGTTGAGGAAGTCATTGCCAAGAGTCTCAAAGACAATCACTTGCTGCCCGCGAAGCTGGCCAAGCAGCTGGGCAATGTGCCTGTGATCGACATGACCGGACCGGAGCGACGCGTCCTCAGTGGCTATCATGCCTTGGGTCAGACCAAGATCACGCCCGATGAGACGCTCTATGATGAGCAGCTGCCGTCGGGCGAAGGAAAGAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGCTGGTTAGTCAATGCGAGCAGGAGATCATTGAAATCGACAAGGCGAAGCGGGAGGGGCAGGATCTGCAAGCATCGCTGGAGTACGAACATCATCAGTTGCTGGAACTGGTGAGTCTGGAGCGCAATCACATGAACACTTTGGAGCAGGTGCTCGCACAAGTCGATCAGCTCAGCGAGAATCCGGACTTAACCATGTCGCAGGCGGAGGAGCTGTTTCTCGACCTGCAGCGCGACTATCCAGCCGAGTTTGAGGAGTTCGGCATGGAGGATATGGCCGGCGGTGTCATTGCTCCATTGTTGCGGCGGGAACTCGCTGATTGGCGCCCGCTGGAGAAGCCCATGCAGCCAATTGAGATGATAAAGCGTTGGCGCATCATACTGAAAAAGGATGAGGATCTGGTGCCCGCATCGGcggagcagctgcagttgcgaCAATCGCGCAACGTTTTCGATCCCTACTCCTCCCTCATCTGGGTAGGGGTGATGCCGTCGATTCGGACGAGCGCACTCAACTGGCAGCCCAAGGAGCATGCATCGATGGCTGCCTTGCTGGACGCATGGGCGCCAGTGTTGCCCACGTGGGTGTTGGACTCGGTGCTGGAGAAACTAGTACTGAACCGGCTAAAGATTGGCGTCCGCGACTGGGATCCATTGACGGATACGGTGCCCATACATATTTGGATCTTGCCCTGGCATGGACTGCTGGGTGAAAAACTGGAGGAGTTTGTCTATCCTCAAATACGCAGCAAACTGGGTGTGGCATTGGAATCTTGGTCACCGCAAGATCGATCCGCGCGGGCCATGCTCACGCCCTGGCAGACGGCGTTTCCCGAGGAACAGTTACTGCAGTTCCTGCTGCGTCACATTATACCCAAGCTACAGGCGGTGCTTGCCGAGTTCATCATCAATCCGCTGCAGCAAGACTTGGAGCTGTGGCATCAGGTGTGGGAATGGCACGAACTAATACCGTCCGCCCACATGGCCCAGCTGCTCGATAAGTGTTTCTTCCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTTTGCCGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGACCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTCGACATGCTGCACCGCGCTACGGATGCGGTTCTCCTACCTACATTCTCACCACAGCCACCGATGCCACCAGCACCAGCCCCAGTGCTGCTCGCTCCCGTACTGCTCATAGATGTGGCTCAGCCCGCTCAGCTCGAGTTTAAGGAACTCGTCTCGCAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCCTTGCCTGGACGGCGAGAGCTGGGCAAACAGatttatCGAGTGGGTAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGGCAGCCTGCACAGCTGGCAACCGGTTGCCCTGAATCAACTCCTGGAGCGTGCACACACTGGCCTCATCTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGDANGRRGGRRGLGGGSAAKDYTAPVNFVAGGIQQAGKQPKKKQLEEGSTKDETAAGESEDSNGNEQRPSFGGKQSQLMDNNGDYSSDSSDGAENKREQQQMRSRNIAGLRHNSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPEVAASIGGQKKPLKEDEDIKEAREFKEQLTKWKKGGVETREKSGKQQRYYYKSVEEVIAKSLKDNHLLPAKLAKQLGNVPVIDMTGPERRVLSGYHALGQTKITPDETLYDEQLPSGEGKSSPISVFSMPELAHNMSLLVSQCEQEIIEIDKAKREGQDLQASLEYEHHQLLELVSLERNHMNTLEQVLAQVDQLSENPDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELADWRPLEKPMQPIEMIKRWRIILKKDEDLVPASAEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHASMAALLDAWAPVLPTWVLDSVLEKLVLNRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEEFVYPQIRSKLGVALESWSPQDRSARAMLTPWQTAFPEEQLLQFLLRHIIPKLQAVLAEFIINPLQQDLELWHQVWEWHELIPSAHMAQLLDKCFFPRWMQVLVMWLNQSPDFAEISRWYAGWKSMFSETILREPCIKEHLRRALDMLHRATDAVLLPTFSPQPPMPPAPAPVLLAPVLLIDVAQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDGSLHSWQPVALNQLLERAHTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00513447;
- 90% Identity
- iTF_00482221;
- 80% Identity
- -