Dpar000777.1
Basic Information
- Insect
- Drosophila paracracens
- Gene Symbol
- sip1
- Assembly
- GCA_035044025.1
- Location
- JAWNMN010000162.1:546538-549258[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-89 1.9e-85 286.8 16.1 3 275 431 707 429 707 0.97 2 2 0.3 2.6e+03 -2.3 0.0 245 271 722 748 713 761 0.66
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAATATGAGCGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGACCACGTCGTCGTCAAACCAAACATCAGCAAATCTACGgCATTTGGGCCGATGACAGCGATAATGAGAGCGAGGGAGAAGTCAGTGGTCGACGTGGCGGTAGGCGTGGCCTGGGTGGCGGTGCTGCCGGCAAAGCAAAGGACTACACGGCGCCCGTTAATTTCGTTGCCGGCGGCATTCAACAAGCTGGCAAACagccaaagaagaagcagctggaggagggCTCCACCAAAGATGAGGCTGCTTCTGGTGAATCGGAGGACAGCGACGGCAACGAGCCACGTCCATCGTTTGGGGgaaagcagccgcagctgatGGACAACAACGAGGATTACAGCTCGAATAGCTCCGATGGTGCCGATAATAagagggagcagcagcagcagatgcggTCCCGGAACATTGCTGGACTGCGTCACAAGTCGCACATTGCAAGCGGTCGGAATGTAGGTGCCTGGGAGCAACATACGCGTGGCATTGGCgccaagctgctgctgcagatgggCTATGAGCCGGGCAAGGGATTGGGCAAGGATCTGCAGGGCATCCAGCAGCCGGTGCAGGCGCATGTGCGCAAGGGCAGAGGTGCCATCGGTGCCTACGGACCCGAGACGGCGGCCAGTATTGGCGGCCAGGCAAAGCCACCGAAAGAAGACGACGACATCAAGGAGGCCAGGGAGTTCAAGGAGCAGCTGACCAAGTGGAAGAAAGTCGGCGTTGAGCCGCGTGATAAGTCTGGCAAACAGCAGCGCTACTACTACAAATCCGTTGAGGAAGTCATTGCCAAGAGTCTCAAGGACAACCACTTGCTACCCGTGAAGCTGGCCAAGCAGCTGGGCAATGTGCCCGTCATTGACATGACCGGACCAGAGCGACGCGTCCTCAGTGGCTATCATGCCTTGGCCCAGAGCAAGATCACGCCCGAGGAAACACTCTACGATGAGCAGCTGCCGTCGGGCGGAGGAAAGAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGCTGGTTAGCCAATGCGAGCAGGAGATCATTGACATCGACAAGGCGAAGCGGGAGGGCCATGATCTGTATGCATCGCTGGAGCAcgagcatcagcagctgctggaacTGGTGAGTCTGGAGCGCAATCACATGAGTACTTTGGAGCAGGTGCTCGCTCGTGTCGATCAGCTCAGCGAGAATCCGGACTTGACCATGTCGCAGGCGGAGGAGCTATTTCTCGACCTGCAGCGCGACTATCCCGCCGAGTTTGAGGAGTTCGGCATGGAGGATATGGCTGGTGGCGTCATTGCTCCATTGCTGCGGCGGGAACTAGTTGATTGGCGCCCGCTGGAGAAGCCCATGCAGCCGTTGGAAATGATAAAGCGTTGGCGCAGCATATTGCAAAAGGATGAGGATCAGGCGCCGGCATCgttggagcagctgcaactgcggcAATCCCGCAACGTTTTCGATCCGTACTCCTCGCTCATCTGGGTCGGGGTGATGCCGTCGATTCGTACGAGCGCACTCAACTGGCAGCCCAAGGAGCATGCATCGATGGCCGCCTTGTTGGACGCATGGGCGCCAGTGTTGCCCACGTGGGTGTTGGACTCGGTGCTGGAGAAACTGGTGCTGACCCGGCTGAAGATTGGCGTTCGCGACTGGGATCCATTGACGGATACGGTGCCCATTCACATTTGGATTTTGCCCTGGCATGGACTGCTGGGTGAGAAGCTGGAGGAGTCTGTCTATCCGCAGATACGCAGCAAACTGGGTGTGGCATTGGAGGCTTGGTCACCACAAGATCGGTCCGCGCGGGCCATGCTCACGCCGTGGCAGACGGCGTTTCCCGAGGAACAGTTGCTGCAGTTCCTGCTGCGTCACATTATACCCAAACTGCAGGCGGTGCTCGCCGAGTTCATCATCAATCCGCTGCAGCAGGACTTGGAGCTGTGGCATCAGGTGTGGGAATGGCATGAACTAATACCAGCCGCCCACATGGCCCAGCTGCTTGACAAGTATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGGCCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGTCCTCGACATGCTGCACCGCGCCACGGATGCGGTCCTCCAACCCACTTCGGCCCCACCACCGCCCATGCCACCAGCGCCCGCCCCTGTGCTTCTCGCTCCCGTAATGCTCATAGATGTGGCTGCGCCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAAAAATGCGCCGAACTGGGCATCATATTCGCCCCATTGCCAGGACGACGCGAACTGGGCAAACAGATTTATCGCGTGGGGAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGTCAGCTTTCAGAGCTGGCAACCTGTGGCCCTCAATCAGCTTCTGGAGCGTGCCCAAACTGGCCTCATCTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEVSGRRGGRRGLGGGAAGKAKDYTAPVNFVAGGIQQAGKQPKKKQLEEGSTKDEAASGESEDSDGNEPRPSFGGKQPQLMDNNEDYSSNSSDGADNKREQQQQMRSRNIAGLRHKSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPPKEDDDIKEAREFKEQLTKWKKVGVEPRDKSGKQQRYYYKSVEEVIAKSLKDNHLLPVKLAKQLGNVPVIDMTGPERRVLSGYHALAQSKITPEETLYDEQLPSGGGKSSPISVFSMPELAHNMSLLVSQCEQEIIDIDKAKREGHDLYASLEHEHQQLLELVSLERNHMSTLEQVLARVDQLSENPDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELVDWRPLEKPMQPLEMIKRWRSILQKDEDQAPASLEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHASMAALLDAWAPVLPTWVLDSVLEKLVLTRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEESVYPQIRSKLGVALEAWSPQDRSARAMLTPWQTAFPEEQLLQFLLRHIIPKLQAVLAEFIINPLQQDLELWHQVWEWHELIPAAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRVLDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLIDVAAPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFQSWQPVALNQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00513447;
- 90% Identity
- iTF_00482221;
- 80% Identity
- -