Dlon002349.1
Basic Information
- Insect
- Drosophila longiperda
- Gene Symbol
- sip1
- Assembly
- GCA_035042125.1
- Location
- JAWNLV010000012.1:1073712-1076430[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-89 2.8e-85 286.3 15.8 3 275 432 708 430 708 0.98 2 2 0.25 2.2e+03 -2.1 0.0 245 269 723 747 714 763 0.49
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATATGAGCGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGACCACGTCGTCGTCAAACCAAACATCAGCAAATTTACGgtATTTGGGCCGATGACAGCGATAATGAGAGCGAGGGAGAAGCCAACGGTCGACGTGGCGGTAGGCGTGGTGTGGGCGGCGGCTCTGCCGGCAAGGCAAAGGACTACACGGCGCCCGTCAATTTTGTTGCCGGCGGCATTCAACAAGCTggcaaaaagccaaagaagaagcagctggAGGAAGGTTCCACCAAAGATGAGACTGCTGCTGGTGAGTCGGAGGACAGCGACGGAAACGAGCCACGTCCGTCGTTTGGGGGCAAGCAGCCGCAGCTGATTGACAACAACGGGGACTACAGCTCGGATAGCTCCGATGAAGCAGAGAATAAAagggagcagcaacagcagcagatgcGGTCACGGAACATTGCTGGACTGCGTCACAATTCGCACATAGCAAGCGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGCATTGGCGCCAAGCTACTGATGCAGATGGGCTATGAGCCGGGCAAGGGATTGGGCAAAGATCTGCAGGGCATCCAGCAACCGGTGCAGGCGCATGTGCGCAAGGGCAGAGGTGCCATCGGTGCCTACGGACCCGAGACGGCGGCTAGCATTGGCGGTCAGGCAAAGCCAATAAAAGAAGACGAAGACATAAAGGAGGCCAGGGAATTCAAGGAGCAGCTAAACAAGTGGAAGAAAGGCGGCGTCGAGCCGCGTGAGAAGTCCGGAAAACAGCAGCGCTACTACTACAAATCCGTTGAGGAAGTCATTGCGAAGAGTCTCAAGGACAATCACTTGCTGCCCGCGAAGCTGGCCAAGCAGCTGGGCAATGTGCCAGTGATCGACATGACCGGACCGGAGCGACGCGTCCTCAGTGGCTATCATGCCTTGGCCCAGACCAAGATCACGCCCGAGGAGACGCTCTATGATGAGCAGCTGCCGTCGGGCGAAGGGAAGAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTACTGGTTAGTCAATGCGAGCAGGAGATCATTGACATCGACAAGGCGAAGCGGGAGGGCCAGGATCTGCAGGCATCGCTAGAGTATGAACATCATCAGCTGCTGGAACTGGTGAGTCTGGAGCGCAATCACATGAACACTTTGGAGCAGGTGCTCACTCGAGTCGATCAGCTCAGCGAGAATACGGACTTGACCATGTCGCAGGCGGAGGAGCTGTTTCTCGACCTGCAGCGCGACTATCCAGCCGAGTTTGAGGAGTTCGGCATGGAGGATATGGCCGGCGGCGTCATTGCTCCATTGTTGCGACGGGAACTTGCTGATTGGCGGCCGCTGGAGAAGCCCATGCAGCCAATTGAGATGATAAAGCGTTGGCGCATCATATTGCAAAAGGATGAGGATCTGGCGCCGGCTTCGGcagagcagctgcagttgcaacaatcGCGCAACGTTTTCGATCCTTACTCCTCCCTCATCTGGGTAGGTGTGATGCCGTCGATTCGGACGAGCGCACTCAACTGGCAGCCCAAGGAGCATGCATCGATGGCTGCCTTTTTGGACGCATGGGCGCCAGTGTTGCCGACGTGGGTGTTGGACTCGGTGCTGGAGAAACTAGTACTGAACCGGCTTAAGATTGGCGTCCGCGACTGGGATCCATTGACAGATACAGTGCCCATACACATTTGGATCTTGCCCTGGCATGGACTGCTGGGTGAGAAGCTGGAGGAGTTTGTCTATCCGCAAATACGCAGCAAACTGGGTGTGGCATTGGAGGCCTGGTCACCGCAAGATCGATCCGCGAGGGCAATGCTCACGCCTTGGCAGACGGCGTTTCCCGAGGAACAGTTGGTCCAGTTCCTGCTGCGTCACATTATACCCAAGCTACAGGCGGTGCTTGCCCAGTTCATCATAAATCCGCTACAGCAGGACTTGGAGCTGTGGCATCAGGTGTGGGAATGGCACGAACTAATACCGTCCGCCCACATGGCCCAGCTGCTCGATAAGTACTTTTTCCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGGCCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTCGACATGTTGCACCGCGCTACGGATGCGGTTCTCCAACCCACATCGGCACCACAGCCACCGATGCCACCAGTGCCAACCCCAATGCTGCTCGCTCCCGTAATGCTCATAGATGTGGCTCAGCCCGCTCAGCTCGAGTTTAAGGAACTCGTCTCGCAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCATTGCCTGGACGACGAGAGCTGGGCAAACAGATTTATCGAGTGGGTAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGGCAACCTCCAAAGCTGGCAACCTGTTGCCCTCAATCAACTCCTGGAGCGTGCACAAACTGGCCTCATCTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEANGRRGGRRGVGGGSAGKAKDYTAPVNFVAGGIQQAGKKPKKKQLEEGSTKDETAAGESEDSDGNEPRPSFGGKQPQLIDNNGDYSSDSSDEAENKREQQQQQMRSRNIAGLRHNSHIASGRNVGAWEQHTRGIGAKLLMQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPIKEDEDIKEAREFKEQLNKWKKGGVEPREKSGKQQRYYYKSVEEVIAKSLKDNHLLPAKLAKQLGNVPVIDMTGPERRVLSGYHALAQTKITPEETLYDEQLPSGEGKSSPISVFSMPELAHNMSLLVSQCEQEIIDIDKAKREGQDLQASLEYEHHQLLELVSLERNHMNTLEQVLTRVDQLSENTDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELADWRPLEKPMQPIEMIKRWRIILQKDEDLAPASAEQLQLQQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHASMAAFLDAWAPVLPTWVLDSVLEKLVLNRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEEFVYPQIRSKLGVALEAWSPQDRSARAMLTPWQTAFPEEQLVQFLLRHIIPKLQAVLAQFIINPLQQDLELWHQVWEWHELIPSAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQPTSAPQPPMPPVPTPMLLAPVMLIDVAQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDGNLQSWQPVALNQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00513447;
- 90% Identity
- iTF_00482221;
- 80% Identity
- -