Dbas004799.1
Basic Information
- Insect
- Drosophila basisetae
- Gene Symbol
- sip1
- Assembly
- GCA_035041595.1
- Location
- JAWNLB010000116.1:2061733-2064463[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-90 7.2e-86 288.0 15.9 3 275 430 706 428 706 0.97 2 2 0.23 1.9e+03 -2.0 0.0 160 190 721 750 712 761 0.48
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAATATGAGCGCTTTGAAATAACGGACTATGATTTGGACAACGAGTTCAATATAAATCGGCCACGGCGTCGTCAAACCAAACATCAGCAAATCTACggCATTTGGGCCGATGACAGCGACAATGAGAGCGAGGGAGAAACCAGCGGTCGACGTGGCGGTAGGCGTGGCCTGGGCGGCGGCgctgcaagcaaagcaaaggaTTACACGGCTCCCGTCAATTTCGTTGCTGGCGGCATTCAACAAGCTGGCAAACAgccaaagaagaagcagctggaggaggGCACAAACAAAGATGAGGCTGCAGCTGGTGATTCGGAGGACAGCGACGGCAACGAGGCACGTCCATCGTTTGGGGgaaagcagccgcagctgaTGGATAACAACGAGGATTATAGCTCGGATAGCTCCAATGGTGAAGAGAATAAgagggagcagcagcagatgcggTCCCGGAACATTGCTGGACTGCGTCACAAATCGCACATTGCAAGTGGTCGGAATGTTGGTGCCTGGGAGCAACATACGCGTGGCATTGGCgccaagctgctgctgcagatgggCTATGAGCCGGGCAAGGGATTGGGAAAGGATCTGCAGGGCATCCAGCAGCCGGTGCAGGCGCATGTACGCAAGGGAAGAGGGGCCATTGGAGCCTACGGACCGGAGACGGCGGCCAGCATTGGCGGCCAGGCAAAGCCCCCGAAAGAAGACGACGACATCAAGGAGACCAGGGAGTTCAAGGAGCAGCTGACCAAATGGAAGAAAGTTGGCGTCGAGCCGCGTGAGAAGTCCGGCAGACAGCAGCGCTACTACTACAAATCCGTTGAGGAAGTCATTGCTAAGAGTCTCAAGGACAACCACTTACTGCCCGTGAAGCTGGCCAAGCAGCTGGGCAATGTGCCCGTCATCGACATGACCGGACCGGAGCGACGCGTCCTCAGTGGCTACCATGCCTTGGCCCAGAGCAAGATCACGCCCGAGGAGACGCTCTACGATGAGCAGATGCCGTCGGGCGGAGGAAAAAGTTCACCGATTAGTGTGTTTAGCATGCCGGAACTGGCGCACAATATGTCGCTGCTGGTTAGCCAATGCGAGCAGGAGATCATTAACATCGACAAGGAGAAGCGGGAGGGTCAGGATCTGCATGCAGCGCTGGAACATGAGCATCAGCAGTTGTTGGAATTGGTGAGTCTGGAGCGTAATCACATGAGCACTTTGGAGCAGGTGCTCGCTCGAGTCGATCAGCTCAGCGAGAATCCGGACTTGACCATGTCACAGGCGGAGGAGCTGTTTCTCGACCTGCAGCGCGACTATCCTGCCGAGTTTGAGGAGTTCGGCATGGAGGATATGGCTGGCGGCGTCATAGCTCCATTGCTGCGGCGGGAACTAGCTGATTGGCAGCCGCTGGAGAAGCCCTTGCAGCCGGTGGAGATGATAAAGCGTTGGCGAAACATATTGCAGAAGGATGAGGATCAGGCGCCGGCATCggtggagcagctgcagctgcggcaaTCGCGCAACGTTTTCGATCCATACTCCTCGCTTATCTGGGTCGGGGTGATGCCCTCGATTCGGACGAGCGCACTGAACTGGCAGCCCAAGGAGCATGCCGTGATGGCCGCTTTGCTGGACGCATGGGCGCCCGTGTTGCCCACGTGGGTGTTGGACTCGGTGCTGGAGAAACTGGTGCTGACCCGGCTGAAGATTGGCGTCCGCGATTGGGATCCGTTGACGGATACGGTGCCCATACACATTTGGATTTTGCCCTGGCATGGACTGCTGGGTGAGAAGTTGGAGGAGTCTGTCTATCCGCAGATACGCAGCAAACTGGGTGTGGCATTGGATGCTTGGTCACCACAAGATCGGTCCGCCCGGGCCATGCTCACGCCGTGGCAGACGGCGTTTCCCGAGGAACAATTGCTGCAGTTCCTGCTGCGTCACATTATACCCAAGCTGCAGGCGGTGCTCGCCGAGTTCATCATCAATCCGCTGCAACAGGATTTGGAGCTGTGGCATCAGGTGTGGGAATGGCACGAACTAATACCCGCCGCCCACATGGCCCAGCTGCTCGATAAGTATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCCGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGGCCATCTTACGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTCGACATGCTGCACCGCGCCACGGATGCGATTCTCCAACCCACTTCGGCCCCACCACCGCCCATGCCACCAGCGCCCGCCCCTGTGTTGCTCGCCCCCGTAATGCTCATAGATGTGGCTCCGCCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCATTGCCAGGACGACGCGAATTGGGCAAACAGaTTTATCGAGTGGGTAAACTATTCTGTTACATCGATCGCAATGTTTGCATGCTGAGCGATGGCAGCTTTCAGAGCTGGCAGCCTGTGGCCCTCAATCAACTCCTGGAGCGTGCACAAACTGGCCTCATCTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGETSGRRGGRRGLGGGAASKAKDYTAPVNFVAGGIQQAGKQPKKKQLEEGTNKDEAAAGDSEDSDGNEARPSFGGKQPQLMDNNEDYSSDSSNGEENKREQQQMRSRNIAGLRHKSHIASGRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIQQPVQAHVRKGRGAIGAYGPETAASIGGQAKPPKEDDDIKETREFKEQLTKWKKVGVEPREKSGRQQRYYYKSVEEVIAKSLKDNHLLPVKLAKQLGNVPVIDMTGPERRVLSGYHALAQSKITPEETLYDEQMPSGGGKSSPISVFSMPELAHNMSLLVSQCEQEIINIDKEKREGQDLHAALEHEHQQLLELVSLERNHMSTLEQVLARVDQLSENPDLTMSQAEELFLDLQRDYPAEFEEFGMEDMAGGVIAPLLRRELADWQPLEKPLQPVEMIKRWRNILQKDEDQAPASVEQLQLRQSRNVFDPYSSLIWVGVMPSIRTSALNWQPKEHAVMAALLDAWAPVLPTWVLDSVLEKLVLTRLKIGVRDWDPLTDTVPIHIWILPWHGLLGEKLEESVYPQIRSKLGVALDAWSPQDRSARAMLTPWQTAFPEEQLLQFLLRHIIPKLQAVLAEFIINPLQQDLELWHQVWEWHELIPAAHMAQLLDKYFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAILQPTSAPPPPMPPAPAPVLLAPVMLIDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDGSFQSWQPVALNQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00513447;
- 90% Identity
- iTF_00482221;
- 80% Identity
- -