Basic Information

Gene Symbol
hang
Assembly
GCA_035045945.1
Location
JAWNON010000004.1:5856908-5872010[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.35 25 5.6 1.0 3 23 538 559 537 559 0.93
2 17 1 71 4.2 3.2 3 22 666 685 664 685 0.89
3 17 0.00076 0.053 14.0 3.3 1 22 784 805 784 807 0.90
4 17 0.073 5.2 7.8 0.1 2 21 819 838 818 839 0.93
5 17 0.00088 0.062 13.8 0.2 2 23 971 993 970 993 0.95
6 17 0.0025 0.18 12.4 0.1 1 23 1001 1024 1001 1024 0.96
7 17 0.00019 0.014 15.9 0.2 2 23 1110 1131 1109 1131 0.97
8 17 0.00036 0.025 15.0 2.9 2 23 1232 1254 1231 1254 0.97
9 17 0.028 2 9.1 0.2 2 23 1263 1285 1262 1285 0.95
10 17 0.0015 0.11 13.1 0.1 1 23 1298 1321 1298 1321 0.97
11 17 0.00016 0.011 16.2 1.1 1 23 1362 1384 1362 1384 0.99
12 17 0.0024 0.17 12.4 0.9 1 23 1392 1415 1392 1415 0.96
13 17 0.062 4.4 8.0 0.3 2 19 1423 1440 1422 1441 0.94
14 17 3.3e-05 0.0023 18.3 0.4 3 23 1552 1572 1551 1572 0.98
15 17 0.0013 0.093 13.3 0.1 1 23 1607 1629 1607 1629 0.97
16 17 0.00075 0.053 14.0 0.6 2 23 1722 1744 1721 1744 0.93
17 17 0.0081 0.57 10.8 0.3 3 23 1800 1820 1800 1820 0.98

Sequence Information

Coding Sequence
ATGTGCGACGCtgtcgcaacaacaacaaccacaacagcagcagcggcagcaacgatCCCAGCAGCCGGATCGGGCTCAGAAGTGGCTGCTGGCGATACAACATTGACAGCAATGGAGGAGCGCACGCGACAAAGTTGCTGTCGCTTGTGCATTGCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAACCGTTGGCCACAAAAATACACAACTGCGTAAATATCAAGatcaCGCCATTGGATCGTCTATCGCTGCATATTTGTCATGCCTGCATCAGCTATTTGAACTCTTGGCAGAGCTTTAAGAATCGCTGCCTCAGCTCACAGTCGAAGCAACGGCAATGGCTGGACGGCGATAAAAGCAAGCAGCAGACGCTTTTGGGATATTTGGATTTGAACAAAACGGAAAATGGCAGCTCCATTGaacttcagcagcagcagcagcagcacgaatCGAATATCGATTCGGCAACGATTGCGGCTGAAAAGGCGTCCGCCAACATTTTGGATGGCATACCTTCGTTGAAGAAACGCAAATCGTTAACAGTTTATGTGAGTCCAAAGCAACAgcttcaacagcaacaacaacaacagcagcagctacaacaacagcagcagcagcaacaacagcagcagcaggtgcagctTGCAGCACCAAGAGCAACGGGCGCGGCGGCGGAATCACAGCAAACGCTTCAGACCCTTTTATTGCAGGTGCcctcagcagcatcagcagcagcattggcaACGACGTCaactcagcagcaacaacagcaacagcgtaaatatcaacaacagcagcaacgtgtcaagcaacaacattaccaccaccaacagcagcaacaacaacaacaacaacagcagcagcatcagcgctTGAGTCGAATTCGTCAGCCGAGACGCCAGCAACAAGCGACAATGTCTGCCCGAATGGTCAAATTTAAGCCGAAAGTGTATTTGCCACTGGATATATCGGTGCCACCGCTGCCACCGCTGTTGCCAACACTATCACAGCCGTTGgacactgttgctgctggtgctaaGTTGGcgccgttgcctttgccgttgccgttgccgctgccgctgccacttgATTTTAGCCAGAGTCAGTGTCAGCAGCCGAATCCGAATacaaatgcgaatgcgaatcaGAGTCAGCAGAAACATGGTAGcgtgttgccgttgccagtGCCGCtattgccgccgctgccagtTGCAACAATGACCAGCAACGCCGCTGCCTCTAGCTCGGCCTCTGCCACTGTCTCAGctacagccgcagcagcagccgcagccccaGCCTCAGTCACGACTCCTCTGCTCATGCCGCCGCTGCCTGCCGTGCCAATCAAGGATGAGCCCATTGATGATACCGACGATGACTATCAAATGAAGAGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCACTAATGACCTCCGACTATGATTATACGGCGCAACACGGCGTGACGGCGGTTGCGGCGGCGGCTTCGCTGCCCGCCAGCGCGGTCGCAAACGTGGCCGCCGCTGGCGACTCAAAGGTGGCCAGCTGTCGGGCGTGCAGTCTGCAGTTCTCGACGCGCGCGAATGCCCGACGCCATGAACGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGATTCACCAAATAATACGCCCATCACAAAACCAACGCCAGCACTGGCCGCCGCACTCGAAATTCAACGTGCCGCAGCGGCGGCCGCAGCCACCGCGGAGGCAACCAAAGCAGCCGCCGGTGGCAACATATCAGCGCAAAAGTATCGCCAGGTGGTAATGAATACGTTCATCAAATGTGAAAATGGCGGCTTCGACTACGACAATCCGGAACAATATCAGCAGCTGCTCACACGCGACAAGGTGGAGTTCATACAAGAGAACAATGAGTTTCTGGAGCAATACCAGACGATGACGTGTCGCTGCTGCAATAAATACTTCAATACCTACAAGAACTTTATGGCCCATGTACGCAAAAAGTATCCGTTGTTGCCGCGCAATCTGTGCTTCAACTGCCTGAAGATGAACGACTCCAAAGCGCTGTTCATATCGCATCTAAAGAAGCGCAACTGCATCAATTTGTATCGTGTGCTGAACGCTTTGCGCCTGAAGCAGCCAAACTTTTTGCATGCCAACGCTTCTGGGGTGGCTGTCTCGGCAAATTTGAGCATTgatcaggcagcagcagcagcagctgcagcaggagcACATGAAACATCAACGGATCGGCCAGAGAAGTTGCGCGCCAAAGAGCTGTTGGTGAACAAGCTGTATGAGTGCAAGCTGTGCCCGAAGGGTTTTCGCACCAAACACGAGTTCCGCACCCATGTGTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCACCTTCTGTGGTTTGGACTTTGCCGATCCTGTCGATCGTCGTCGCCACTACAACAATATGGAGTGCATTGTGCGCTTGCGCTGCATGACCTGCGATGCCAAGCTGGAGACGCATCAGCGTTTTCTTGATCACGTCTACCAGGATCATCTGGGCGGTGTGAGCAGCGATAATGCATCCACAGTTAACAGCGGCATGGATCATTCACCTGGCAAACGCAGCCTGCTGGGTGGCATGGGCATTGGCATGAGTCAGTCATCGAATGACGAGTCACGCAGCAGCAttcacaacaataacaatgctgTGGACTTGCCATTCACCTCGACACCGAAGCCAGCTGGAGCGGCGGGCGGAGCAGCTGGAGCGGCGGCGAccagtggcggcggcggcggcggctctACAACGGGCAGTCGCGATGCACCCAAATCGCAGTATTTTTCCCGTATGCCACAGGTCTGCCCCATTTGTGGGCAACAgtacaacaactataacaacgTGCTGCGTCACATGGAATCGAAGCATCCCAACAAACTGCCCGAGACATACAAGTGTGTACGGTGCGGCCTGGGCTATCCGCGAATCTCATATCTGCGCGAGCACATGATCAATGTGCACGGCGTGGACAAGAATCGGCATTCGGGCGGCTTCGAGTATATTGTGAATGCCGATGCAGTCAAATTGGCGGATGGCAGTACGCCGAACGTCTATACCGGCCGATATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCgatgatgaggaggaggaaaCTGGCAGCGTTGCCAAAAAGATGCGACTCgatgacagcagcaacaatagcagcatCAACATGAACATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAACATTGGCCTATCGAATCATATGCGTTCGCATTATACAGCCTCGACGGCAACGAATGCAGCGCTGGCGGCTGCCAATCGCATGACACCCAAATCTTTGACAATTACTGCAACTCCGCCATTGGACACGGCTGCAGCATCGTCCACGagcattgcagcagcagcagcagctgcgacgcCCGCCACAAgtacagcggcagcagcagcaggaacaacaactGCCAGCGGTAGCGTTGGCGGTTTGCCACCAGCCATGGTGCATCAGACGCCACAGGAACAGGCTGTATTCCGGCGCAGCTTGGATCAGGCAGCCGATCGTCGCTTTCGACGCATGCGATGTCGCATCTGTCAGCGCAGATTTAGCTCAAAGAAATCATATCGCTATCACATGCTCACCGATCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCAGAGTTCGCGTACGAGAAGGGCCTCAAGGTGCATCTGTTCAAGGTGCACGGACGGGCTATCAAGGACGAGATGATTGTGAAGCAATTCGAGTGCGATATTTGCTCAATTGTCTACAGCTctgagctggagctgcagcagcacaagcgCAGCGTACACAAATCCCAAATGGGCGCCAATGATGCGTCCAAATCAGCAACCAAATCATCTACCGCTACCTCAGCTGCTGACCTGGCCGACGCATCCGGCACGACTGTCGCCGTCCTGCCACTCTACTGGTACCAGTGCAAGTACTGTCCATCCAACTTCAATACTAACAAGAAACTGGCCATTCACATCAATTCGCACGATGAGTTCGATTCGAACGATTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGACGTAAGAGCCTCTGGgtGCATCGCTATAAGAAGCATCCGCAGGTGCCGGATCCAGTTGAGTGTACGCTGTGCCGCAAGATGTTCTTTGATCGACAGATGCTGGAGAATCATACGCCCACCTGCAATCGGAAGCCCATCACTGCCACTGGCGCCCATCAgcaggatcagcagcagcaacaacaccatcagcaacagcagcagctgcaaatgcaacagcatcGCACCATATTCAAGCACAAAACGggcgatgatgacgacgaggaAGATGATAAGCTAATGCTGCTGGACGATGGCCTCATGGGCAGCGATGGCAGCAATGGTGGCAATGTGATCCACGCGGCGAACACCACCaataccaccaccaccgccaccagcagcagcagcagcagtaatcCAAATACAATAAATGCGAGCACATTGAAGATACGCATACCGGAGGTGGCGTGCACCATTTGTGGTGCTCGCTTCACCGACCAGGAGATGTTCACCAAGCATATACAGAAGCATGAACAGGATCTGTATGTGGACAATCCGTTGGCGGCCATGTTCGATGATGGGCCAGCCGATGCTGGCCAATTTCAGGTGGAGCGACAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCACGAAAACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCTCATCATCGACGGCGAAGCGACAACActgaacaacagcagcagcagcaacaacaacaacaacaacaacaattcgctGAGCTCCTCATCGATGCTGCGCGAGCTACATGCAGTGGGCCTGATGcccaaccagcagcagcaccagaagcaactacaacaacaacagcagcagcaacaacaacaacaacagcagcagcggaacaACAACACATCGAGCAGCTCGAGCAAGTCGCTGAAGCGAAAACGTGAACTGAAATGCGAATATTGCGCCTCCACATtcattagcaacaacaacctgCGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAATCTGCCGGAGCCGCCAGCCATAGAAGTTGATGAGCCGTTGACGTGCCGTCGCTGCGGCGATATACGCTTCGATACCAAAGAGCTGTGGATCGAGCATAAGCTGGCGGACGCCAAAGTGGTGCGTCCGTTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTACTTGTCGCGCAAAGAGAAGCTCATCAATCACATTAACAATCATCTCAAAGAGGATGTGATAGTGCCGGTGGCAACGGTGGCGGCAGCCACCAAGGCAGCGCCACCCGTTTCCGTGCTAGCCAACAAACATGCGACTGTAAAAACTGCAgctggaacaacaacaacaacagcagcaacggcaacagcaacagctggagTTGGCGCAAAAGGCATAATTAGAGCGGCGGCACCAGCTGGCGGTAGAGTTAATAAGAATAAACAactggaggagcagcagcagcagcaactggcgaTGAAGGTGgcaacaaaacagcagcagcaacatcaacaacaacagcagcagtcggcAAATGATGATAATGCTGAGCAAGATGATGAGGAGGATGACAGTGATAtggatgatgaagatgatgacgatgatgatagCAATAGTGGCGATGGGGATAGCACAagtgctgatgatgatgacgaggacgacgacgacgaggaggaTGATGACGACGAGGGTGACgttgatgacgacgatgatgatgatgacgatgaagaTGTCGATGGCGATGTTGTCGcacaacaattgctgcaacaaaaacaacaacagcagcagcagcagcagcagcaacaacagccgcagcccctcaacagcaacagcaatagcgtGGTTGTaaacgatgatgatgatgatctcATTGAGGAAGTCATCGAGGATGATGGCATTGTCGAGGAGTTGGTCGATGATGAAGACGACGATGAGGACGATGACGATGGCAATACAACCGATGAGAACGCTCAGCTGGCAGCCAATACaaagcaccagcaacaacagcagcagcagcagcagcagcatgggCGACGCATCAACTTTGACTACTCGCGCTCCGACAGCGCCAAGCtgaacggcaacggcaaacagacgccgcagcagcagcagcagcagctggcaaagtCGAAGGGGCAGCCGACGATGCTCGTGATGCACAGCTCCgaggatgatgaggatgaggatgtcAATGTCAATGATCGTGATCGTgatggtgttggtgttggtcaTGTTGACGATGATATTGTCGAagatgatgaggatgaggagggCGTGGTTGAAGCAATGACCATTGATGATATTATTGAAGAAGATGATGGGGAGGATGAGGATGACGATGTGGTTGGTGTcggtggtggtgttgttgaagacgacgatgatgatgatgatgttgaggAAGACATGGATgaggatgacgatgatgaagatgatgatgacgatgacggtgacgacgacgacgatgatggcGTCaatattggcaacaacaatcgtCGTCGCGACGGTGCTGTGATGGTCAGCGGCATCAGAATTGGCGATGGTGAGGCTGATGATGGTGCTGATGTCGTTGCTGATGGTGATGTGGATGCTGATGCTACATCATCATCGGAGAGcgagtcaacaacaacaacatcgcaTTCAATTGGAGCAACTGCAGTCACATATTAA
Protein Sequence
MCDAVATTTTTTAAAAATIPAAGSGSEVAAGDTTLTAMEERTRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITPLDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLDGDKSKQQTLLGYLDLNKTENGSSIELQQQQQQHESNIDSATIAAEKASANILDGIPSLKKRKSLTVYVSPKQQLQQQQQQQQQLQQQQQQQQQQQQVQLAAPRATGAAAESQQTLQTLLLQVPSAASAAALATTSTQQQQQQQRKYQQQQQRVKQQHYHHQQQQQQQQQQQQHQRLSRIRQPRRQQQATMSARMVKFKPKVYLPLDISVPPLPPLLPTLSQPLDTVAAGAKLAPLPLPLPLPLPLPLDFSQSQCQQPNPNTNANANQSQQKHGSVLPLPVPLLPPLPVATMTSNAAASSSASATVSATAAAAAAAPASVTTPLLMPPLPAVPIKDEPIDDTDDDYQMKSIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLTRDKVEFIQENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRLKQPNFLHANASGVAVSANLSIDQAAAAAAAAGAHETSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCTFCGLDFADPVDRRRHYNNMECIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTVNSGMDHSPGKRSLLGGMGIGMSQSSNDESRSSIHNNNNAVDLPFTSTPKPAGAAGGAAGAAATSGGGGGGSTTGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEETGSVAKKMRLDDSSNNSSINMNIANQQKECLICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSLTITATPPLDTAAASSTSIAAAAAAATPATSTAAAAAGTTTASGSVGGLPPAMVHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDICSIVYSSELELQQHKRSVHKSQMGANDASKSATKSSTATSAADLADASGTTVAVLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQHHQQQQQLQMQQHRTIFKHKTGDDDDEEDDKLMLLDDGLMGSDGSNGGNVIHAANTTNTTTTATSSSSSSNPNTINASTLKIRIPEVACTICGARFTDQEMFTKHIQKHEQDLYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQNLIIDGEATTLNNSSSSNNNNNNNNSLSSSSMLRELHAVGLMPNQQQHQKQLQQQQQQQQQQQQQQRNNNTSSSSSKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPAIEVDEPLTCRRCGDIRFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATVAAATKAAPPVSVLANKHATVKTAAGTTTTTAATATATAGVGAKGIIRAAAPAGGRVNKNKQLEEQQQQQLAMKVATKQQQQHQQQQQQSANDDNAEQDDEEDDSDMDDEDDDDDDSNSGDGDSTSADDDDEDDDDEEDDDDEGDVDDDDDDDDDEDVDGDVVAQQLLQQKQQQQQQQQQQQQPQPLNSNSNSVVVNDDDDDLIEEVIEDDGIVEELVDDEDDDEDDDDGNTTDENAQLAANTKHQQQQQQQQQQHGRRINFDYSRSDSAKLNGNGKQTPQQQQQQLAKSKGQPTMLVMHSSEDDEDEDVNVNDRDRDGVGVGHVDDDIVEDDEDEEGVVEAMTIDDIIEEDDGEDEDDDVVGVGGGVVEDDDDDDDVEEDMDEDDDDEDDDDDDGDDDDDDGVNIGNNNRRRDGAVMVSGIRIGDGEADDGADVVADGDVDADATSSSESESTTTTSHSIGATAVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2