Dmer014439.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- hang
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000165.1:9371794-9386864[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.4 30 5.5 1.0 3 23 668 689 667 689 0.93 2 18 1.2 87 4.0 3.2 3 22 796 815 794 815 0.89 3 18 0.00087 0.065 13.9 3.3 1 22 911 932 911 934 0.90 4 18 0.084 6.3 7.6 0.1 2 21 946 965 945 966 0.93 5 18 0.001 0.075 13.7 0.2 2 23 1095 1117 1094 1117 0.95 6 18 0.0029 0.22 12.2 0.1 1 23 1125 1148 1125 1148 0.96 7 18 0.00022 0.017 15.8 0.2 2 23 1234 1255 1233 1255 0.97 8 18 0.00041 0.031 14.9 2.9 2 23 1349 1371 1348 1371 0.97 9 18 0.033 2.4 8.9 0.2 2 23 1380 1402 1379 1402 0.95 10 18 0.0017 0.13 12.9 0.1 1 23 1415 1438 1415 1438 0.97 11 18 0.00018 0.014 16.0 1.1 1 23 1490 1512 1490 1512 0.99 12 18 0.0028 0.21 12.3 0.9 1 23 1520 1543 1520 1543 0.96 13 18 0.071 5.4 7.9 0.3 2 19 1551 1568 1550 1569 0.94 14 18 3.8e-05 0.0029 18.2 0.4 3 23 1670 1690 1669 1690 0.98 15 18 0.0073 0.55 11.0 0.1 1 23 1725 1747 1725 1747 0.97 16 18 0.00086 0.064 13.9 0.6 2 23 1833 1855 1832 1855 0.93 17 18 0.0093 0.7 10.6 0.3 3 23 1911 1931 1911 1931 0.98 18 18 5.5e-05 0.0041 17.7 2.3 1 23 2369 2391 2369 2391 0.99
Sequence Information
- Coding Sequence
- ATGGGCAATCTACTCCTGCTCTTGCTGAGCGGCGTTTCCTGTCTacgcgagctgctgctgctgctgctctgctacTGGCTGGCCCCATTTGATTGTGCAAGCACTGGCGATGACGACAAcgacgccgacgacgacgactacgACGAGACCGAGCCAAACGTTGTTTCCCGCAGCCCCTGCCCGTGTCGTGTCCCTCAGTCTCAATGGCACTTGCCCGtgagcaacatcatcatcattggaAATGGAAACGGAATCGAGCGTTCGCATTTGTGCTTGTCCACGCCATGCCGTGTGCTCCGGCTCAGTGCCGTCTGCCTCTGGCTTTGCTTGAAGTGCCAAGTCACGATgcccgacgacgacgacgacggcggcgacggcaacgaCGACGCGACGGCCATCGCCGTTTATTGCAGAGCTCGccgcgacgacgacgacgacgatgactcTCTGGACTGCGCCCCCGGCAACGACATCATCATCTACGTcggcgtcgacgtcgtcgtcgttgtcgacacgttgctgctgcgtgtGCTTGGTGCTTGGGCAAAGACGTTTGGTGGTGTTCCTGCTTCAGTGGCACTTGAGAAAGAGATGTGCCCAACAGGATGTCGCCGTGCGGGCGGCTTGGTGTGGATCACGCCATTGGATCGTCTGTCGCTGCATATTTGCCATGCCTGCATCAGCTATTTGAACTCCTGGCAGAGCTTTAAGAATCGCTGCCTCAGCTCACAGTCcaagcagcggcagtggctgGAGAGCGATAAAAGCAAGCAGCAGACGCTTCTCGGATATTTGGATTTGAACAAAACGGAGAATGGCAGCAGCTCCattgaacagcaacagcaacagcagcagcagcacgaatCGAATATCGATTCGGCAACGATTGCAGCTGAAAAGGCGTCCGCCAACATTTTGGATGGCATACCTTCGCTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCaaagcaacagctacaacagcaacaacaacaacagcagcagcagcagctacaacagcagcagcagcaacaacaacaacaacaggcgcAGGTGCAGCATGCACCAAGAGCAACGAGCGCGGCGGCGGAATCACAGCAAACGCTGCAGACCCTTTTATTGCAGGTGCccgcagcggcagcattgGCAACGACGTcaacccagcagcagcagcagcagcaacagcaacagcgcaaatatcaacagcagcaacgtgTCAAGCAGCAACATTAccatcagcaacatcaacagagtcagcaacaacaacaacaacaacagcagcagcgcttgAGTCGCATTCGTCAGCCGCGACGCCAGCAACAGGCAACAATGTCTGCCCAGCGAATGGTCAAGTTTAAGCCGAAAGTGTATTTGCCATTGGATATATCGGTGCCACCGTTGCCAGCGTTGCCAGCGTTGCCGTTGCCGACGACGTCGCAGCCGGCTgacactgttgctgctggtgctaaGTTGgcgccgttgccgctgccgctgccgcttgATTTTAGCCAGAATCCGAATCCGAATGCGAGTCAGAGTCAGCAGAAACATGGCAAcgtgctgccgttgccgttgccgctgccattgccattgccgccGTCGACGCCGCTGTTGCCACCGCTGCCGGCTGCCACAATGACCAGCAACGCCGCTGCCTCtagctctgcctctgcctctgtctcagctacagccgcagccgcagccacaaaCACGACTCCTCTGCTCATGCCGCCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCATTGATGATACGGACGATGACTTCCAGATGAAGTGCATAGACGAGTCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAGGGCGATGTGCCACTAATGACCTCCGACTATGATTACACGGCGCAACACGGCGTGACGGCGGTTGCGGCGGCGGCATCTCTGCCCGCCAGCGCGGTTGCAAACGTGGCCGCCGCCGGCGACTCAAAGGTGGCCAGCTGTCGGGCCTGCAGTCTTCAGTTCTCGACGCGCGCGAATGCCCGACGCCACGAACGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGATTCACCCAACAATACGCCCATCACAAAGCCAACGCCGGCCCTGGCCGCCGCTCTAGAAATACAGCGCGCCGCcgcggcggcagcggccaCCGCAGAGGCAACCAAAGCCGCCGCCGGTGGCAACATATCAGCGCAAAAGTATCGCCAGGTGGTCATGAATACGTTCATCAAGTGCGAAAATGGCGGCTTCGACTACGACAATCCGGAACAATACCAGCAGCTGCTCACGCGCGACAAGGTGGAGTTCATACAGGAGAACAACGAGTTCCTCGAGCAGTACCAGACGATGACCTGCCGCTGCTGCAACAAGTACTTCAACACCTACAAGAACTTCATGGCGCACGTGCGCAAAAAGTATCCACTGCTGCCGCGTAACCTCTGCTTTAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATCTGTATCGCGTTCTGAACGCGCTGCGCCTGAAGCAGCCAAACTTTTCGCACGCCAACGCATCCGGCGTTGCCGTCTCGGCCGACTTGAGTCTAGGCCagggggcagcagcagcagcagcagtagaatcACCATCGGAGCGACCAGAGAAGCTGCGTGCCAAGGAACTGCTGGTGAACAAGCTGTACGAGTGCAAGCTGTGCCCCAAGGGCTTTCGCACCAAGCACGAGTTCCGCACCCACGTGTACGACAAGCACGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCACCTTCTGCGGCTTGGACTTTGCCGATCCCGTGGATCGGCGTCGCCACTACAACAACATGGAGTGCATTGTGCGGCTGCGCTGCATGACCTGCGATGCGAAGCTGGAGACGCATCAGCGTTTCCTCGACCACGTCTACCAGGATCATCTGGGCGGCGTGAGCAGTGATAATGCCTCCACGGCCAACAGCGGCATGGATCATTCGCCGGGCAAGCGCAGCCTGCTGGGCGCTCTGGGCATCGGCATGAGTCAGTCCTCCAATGACGAGTCGCGGAGCAgcacccacaacaacaacaatgctgcGGAAGCGGCCTTCACCTCGACCCCCAAgccagctggagcagcaggcggcggcggcgcatcagcagcagcaggcactgGCGGCTCCACGTCGGGCGGTCGCGATGCACCCAAGTCGCAGTATTTCTCCCGCATGCCACAGGTGTGCCCGATCTGTGGGCAGCagtacaacaactacaacaacgtgCTGCGCCACATGGAATCGAAGCATCCCAACAAGCTGCCCGAGACGTACAAGTGCGTGCGCTGTGGACTGGGATATCCGCGAATCTCGTACCTGCGCGAGCACATGATCAATGTCCATGGCGTGGACAAGAATCGGCACTCGGGCGGCTTCGAGTACATTGTGAATGCGGACGCAGTGAAGCTGGCGGATGGCAGCATGCCGAACGTCTATACGGGTCGATATGACTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCgatgacgatgatgaggaAGGCGGCAGCGTGGCCAAGAAGATGCGCCtcgacgacagcagcaacaacagcagcatcaacatgAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAACGCGGTGTTCAGCAACAACATTGGCCTCTCGAATCACATGCGCTCCCATTATACGGCTGCGACGGCCACGAATGCCGCACTAGCGGCTGCCAGTCGCATGACGCCCAAATCCTTGACAATTACCGCAACTCCGCCATTGGACACGGCTGCAGCCACGTCCACAAGCactgcggcagcaacagcggcgcctgccacagcagcagcagctgcgacaCCAACTGTTGCCGCTGGTGGTCTGCCGCCCGCAATGGTGCATCAGACGCCGCAGGAGCAGGCCGTGTTCCGGCGCAGCCTGGACCAGGCGGCCgatcgtcgcttccggcgcaTGCGCTGCCGCATCTGCCAGCGCAGGTTCAGCTCGAAGAAGTCGTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAACGTCCAGTTCATCAAGTGCAAGCTCTGCAATGCGGAGTTCGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTGTCAAGCAGTTCGAGTGCGACATCTGCTCCATTGTCTACAGctcggagctggagctgcagcagcacaagcGCAGCGTGCACAAGTCCCAAACGGGCGCCAATGATGCCTCCAAATCGGCAACAGGAACCAAATCGTCCACCGCTACCTCAGCTGCTGACCTGGCCGAGACATCAGGCGTGGGGGGCGTGGGCACTGGAGCCGGTGCAGGTGCAGCCGTCCTGCCCCTGTACTGGTACCAGTGCAAGTACTGCCCATCCAACTTCAACACCAACAAGAAACTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAACGACTATTCGTGCAAGGATTGCGGCAATGTGTACAGCGGGCGCAAGAGCCTCTGGGTGCATCGCTATAAGAAGCATCCGCAGGTTCCAGATCCAGTCGAGTGCACGCTCTGCCGTAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCACACGCCCACCTGCAATCGTAAGCCCATCACTGCCACCGGCGCACATCAGcaggatcagcagcagcagcaacaccagcagcaacaccagcagcaacagttgcagctgcaacagcaacgcgCCATATTCAAGCACAAGACGggcgacgatgatgatgaggaggaggatgatcagctgttgctgctggatgACGGTGGTgtgggcagcgacagcaatgGAGCGAATGCTATCCATGCGGCAGCCACCAGCAACAATCCAAATACGATAAATGCGAGCACAATGAAGATACGCATCCCGGAGGTGGCCTGCACCATCTGTGGGGCACGCTTCACCGACCAGGAGATGTTCACCAAGCACATACAGAAGCACGAACAGGATCTCTATGTGGACAATCCGTTGGCGGCCATGTTCGACGATGGCCCCGCCGATGCTGGCCAATTCAAGGTGGAGCGCCAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGaatCTCATCATCGACGGCGAAGCGACAACGACGttgaacaacagcagcagcaacaacaacaacaacaattcgcTGAGCTCCTCGTCGATGCTGCGCGAGCTGCATGCAGTGGGTCTGATGcccaaccagcagcagcacaggaagcagctccagcagcagcaacaacagcagcagcagcggaacaACACGTCCTCGAGCGGATCGAGCAAGTCGATGAAGCGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACCTtcattagcaacaacaacctgCGACGCCACATGTACGAGCTGCACAAGCACGAGGTTAGCAATCTGCCGGAGCCGCCAGTGATCGAGGTGGATGAGCCGCTGACGTGCCGCCGTTGCGGCGATATACGCTTCGAGACCAAAGAGCTGTGGATCGAGCATAAGCTGGCGGACGCCAAGGTGGTGCGTCCGTTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCACCTCAAGGAGGATGTGATAGTGCCCGTGGCGACGGTCACCAAGGCGGCGCTGCCCACGAAGAATGCGGCGGCAAAGGCGACAGCTGGAGCAGCGGGaacaacaggagcagcaggagcaggagcagcagcaacaacagcagcagcagcagcggcgacagcagcaaaGGGCGTCACAGCTGGCGGCAGAGTCAATAAGAATAAGCAGCTGGAGGACCAGCTGAGCATGAAGGTGGCAacgaagcaacagcagcagcagcaggaggatgAGGAGGATGGCACTGATatggatgatgatgatgaggaagACAGCGACAGTGGCGAGGGCGAGAGCACGAgcgctgatgatgatgatgacgacgatgatgacgatgaggGCGACGTTGATGAGGACGATGATGAGGATGAAGATGTGGATGGAGTTGTcgagcagcaattgctgcagcagaaacaacagcagcagcagcagcagcaacaacagaccCTCAACAACGTAGCTGCGaacgatgatgacgacgatcTCATTGAGGAAGTCATCGAGGAGGATGGCATTGTCGAGGAGCTGGACGACGATGAGGACGATGAGGGCGACGAGGATGGCAACACAACCGACGAGCACCAGCAGCTGGCAGCCGGCAATGCAAAGCAACAGCCGCGACGCCTCAACTTTGACTATTCGCGCGCCAAGCTGAACGGGAATGggaatggcaatggcaaacagacgccacagcaacagcagcagcagctgggcaaGGCGAAGGGGCAGCTGGTTATGCACAGCTCCGAGGATGAGGAGGATGGTGTCGATGACGAGGAAGATGAGGAGGGCGTGGGCGAAGCGATGACCATTGATGATATTATTGAAGAAGATGATGGGgaggatgaggatgacgaTGTGGTTGGGGTCGATGGTGGTGTTGTTgaggacgacgatgacgacgatgatgatgaggatgatgTTGGGGAAGATATggacgaggacgacgacgatgatgatgacaacgatgaagacgacgacgacgatgatgatgatgatgacgatgatcaTGACGATGGCGGCGTCAATGTCGTTGGCAACAACAATCGTCGTCGCGACGGTGCTGTGATGGTCAGCGGCATCAGCATTGGCGACGGTGAAGCGGATGATGATGGTGTTGCCGATGCTGATGTGGATGGTGATGTGGATGCTGATGCTACATCATCATCGGAGAGCGAgtcgacaacgacaacatcgCATTCAATTGGTGAGCGGCGTAAAAAATCAGTAGTTAAATCAGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCAACTGCAGTCACATATTAAAAGCCATTTTCTGAATGGGCCGTCGGCgggtggcggcggcagcagcagcagcagcagcagcagcaatagcagcaatagcagcaacagcagcggcagcggaaGTAGCAGAAGGATTGGTGccggcgctggcagcggcagcagcagcagcggcagtggcagcaggaccaacaacaacaacaataataataataataataataataccaataataacaataataataacagcaaaagcaaaaccaaaaagTCCGGCTTGgatgccgccgctgctgctgcaacaacatcaacaacaacggtaacaacggcagcaacaaccagatcagcaacagcaacagttgctgctgaagcagctgcagcaacggcagctgccGACGCCGCAAACAGCTTGAACTGA
- Protein Sequence
- MGNLLLLLLSGVSCLRELLLLLLCYWLAPFDCASTGDDDNDADDDDYDETEPNVVSRSPCPCRVPQSQWHLPVSNIIIIGNGNGIERSHLCLSTPCRVLRLSAVCLWLCLKCQVTMPDDDDDGGDGNDDATAIAVYCRARRDDDDDDDSLDCAPGNDIIIYVGVDVVVVVDTLLLRVLGAWAKTFGGVPASVALEKEMCPTGCRRAGGLVWITPLDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLESDKSKQQTLLGYLDLNKTENGSSSIEQQQQQQQQHESNIDSATIAAEKASANILDGIPSLKKRKSLTVYVSPKQQLQQQQQQQQQQQLQQQQQQQQQQQAQVQHAPRATSAAAESQQTLQTLLLQVPAAAALATTSTQQQQQQQQQQRKYQQQQRVKQQHYHQQHQQSQQQQQQQQQQRLSRIRQPRRQQQATMSAQRMVKFKPKVYLPLDISVPPLPALPALPLPTTSQPADTVAAGAKLAPLPLPLPLDFSQNPNPNASQSQQKHGNVLPLPLPLPLPLPPSTPLLPPLPAATMTSNAAASSSASASVSATAAAAATNTTPLLMPPLPAVPIKDEPIDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLTRDKVEFIQENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRLKQPNFSHANASGVAVSADLSLGQGAAAAAAVESPSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCTFCGLDFADPVDRRRHYNNMECIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGMDHSPGKRSLLGALGIGMSQSSNDESRSSTHNNNNAAEAAFTSTPKPAGAAGGGGASAAAGTGGSTSGGRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSMPNVYTGRYDYVMKDLMSITNGGTLDDDDEEGGSVAKKMRLDDSSNNSSINMSIANQQKECLICNAVFSNNIGLSNHMRSHYTAATATNAALAAASRMTPKSLTITATPPLDTAAATSTSTAAATAAPATAAAAATPTVAAGGLPPAMVHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDICSIVYSSELELQQHKRSVHKSQTGANDASKSATGTKSSTATSAADLAETSGVGGVGTGAGAGAAVLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQHQQQHQQQQLQLQQQRAIFKHKTGDDDDEEEDDQLLLLDDGGVGSDSNGANAIHAAATSNNPNTINASTMKIRIPEVACTICGARFTDQEMFTKHIQKHEQDLYVDNPLAAMFDDGPADAGQFKVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNLIIDGEATTTLNNSSSNNNNNNSLSSSSMLRELHAVGLMPNQQQHRKQLQQQQQQQQQRNNTSSSGSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDIRFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATVTKAALPTKNAAAKATAGAAGTTGAAGAGAAATTAAAAAATAAKGVTAGGRVNKNKQLEDQLSMKVATKQQQQQQEDEEDGTDMDDDDEEDSDSGEGESTSADDDDDDDDDDEGDVDEDDDEDEDVDGVVEQQLLQQKQQQQQQQQQQTLNNVAANDDDDDLIEEVIEEDGIVEELDDDEDDEGDEDGNTTDEHQQLAAGNAKQQPRRLNFDYSRAKLNGNGNGNGKQTPQQQQQQLGKAKGQLVMHSSEDEEDGVDDEEDEEGVGEAMTIDDIIEEDDGEDEDDDVVGVDGGVVEDDDDDDDDEDDVGEDMDEDDDDDDDNDEDDDDDDDDDDDDHDDGGVNVVGNNNRRRDGAVMVSGISIGDGEADDDGVADADVDGDVDADATSSSESESTTTTSHSIGERRKKSVVKSAAHGAAADQSNSSYTCDLCQLCFDSQEQLQSHIKSHFLNGPSAGGGGSSSSSSSSNSSNSSNSSGSGSSRRIGAGAGSGSSSSGSGSRTNNNNNNNNNNNNTNNNNNNNSKSKTKKSGLDAAAAAATTSTTTVTTAATTRSATATVAAEAAAATAAADAANSLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476771;
- 90% Identity
- iTF_00545386;
- 80% Identity
- -