Basic Information

Gene Symbol
hang
Assembly
GCA_035045845.1
Location
JAWNOS010000596.1:11387973-11400384[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.38 29 5.6 1.0 3 23 489 510 488 510 0.93
2 18 1.1 85 4.1 3.2 3 22 617 636 615 636 0.89
3 18 0.00081 0.063 14.0 3.3 1 22 733 754 733 756 0.90
4 18 0.079 6.2 7.7 0.1 2 21 768 787 767 788 0.93
5 18 0.00094 0.074 13.8 0.2 2 23 921 943 920 943 0.95
6 18 0.0027 0.21 12.3 0.1 1 23 951 974 951 974 0.96
7 18 0.00021 0.016 15.8 0.2 2 23 1060 1081 1059 1081 0.97
8 18 0.00039 0.03 15.0 2.9 2 23 1188 1210 1187 1210 0.97
9 18 0.03 2.4 9.0 0.2 2 23 1219 1241 1218 1241 0.95
10 18 0.0006 0.047 14.4 0.2 1 23 1254 1277 1254 1277 0.97
11 18 0.00017 0.013 16.1 1.1 1 23 1325 1347 1325 1347 0.99
12 18 0.0026 0.21 12.4 0.9 1 23 1355 1378 1355 1378 0.96
13 18 0.067 5.2 7.9 0.3 2 19 1386 1403 1385 1404 0.94
14 18 3.6e-05 0.0028 18.2 0.4 3 23 1500 1520 1499 1520 0.98
15 18 0.0068 0.53 11.1 0.1 1 23 1555 1577 1555 1577 0.97
16 18 0.0008 0.063 14.0 0.6 2 23 1662 1684 1661 1684 0.93
17 18 0.0087 0.68 10.7 0.3 3 23 1740 1760 1740 1760 0.98
18 18 2.1e-05 0.0016 19.0 1.6 1 23 2229 2251 2229 2251 0.99

Sequence Information

Coding Sequence
ATGGTTGCCCGCTGCTCAGCGacggcaacgacgacgacggtgGCTCTCTGGACTGCGCCCCCGGCAACGACATCATCATCTACGTCGGCGTCGTCGCAGCAGTCATTGTCGACACGTTGTTGCTGCGTGTGCTTGaTCACGCCATTGGATCGTCTATCGCTGCATATTTGCCATGCCTGTATCAGCTATCTGAACTCCTGGCAGAGCTTTAAGAATCGCTGCCTCAGCTCACAGACCAAGCAACGGCAGTGGTTGGACAGCGATAAAAGCAAGCAGCAGACGCTTCTCGGATATTTGGATTTGAACAAAACGGAGAATGGCAGTGCCattgaacagcagcaacagcagcagcacgaatCGAATATCGATTCGGCAATGACTGCAGCTGAAAAGGCGTCCGCCAACATTTTGGATGGCATTCCTTCGTTGAAGAAACGCAAATCGTTAACAGTTTATGTGAGTCCaaagcaacagctacaacaacaacaacagctacagcagctacaacagcagcagcaacaacaacagcagcaggtgcAGCATGCAGCAAGAGCAACGAGCGCGGCGGCGGAATCACAGCAAACGCTTCAGACCCTTTTATTGCAGGTGCCCTCAGTGGCAGCGACTtcagcccagcagcagcaacaacaacaacagcaacagcgcaaatatcaacagcaccagcagcaacgtgttaagcaacaacattaccaacaacaacatcatcagagccaacaacaacagcatcagcgcTTGAGTCGCATTCGTCAGCCACGACGCCAGCAACAGGCGACAATGTCTGCCCAGCGAATGGTCAGATTTAAGCCGAAATTGTATTTGCCATTGGATATAGCGGTGCCGCCGCTACCACCGCTGTTACCAACACCGACGTcgacacaacagcagcagcagcctgagactgttgctgctggtgctaaGTTggcgccgttgccgttgccgttgtcgctGCCGCTTGATTTTAGCCAGAGTCAGTGTCAGCATCCGAATCCGAATCAAAGTCAGCAGAAACATGGCAAcgtgttgccgttgccattgccattgccgccGTCGACGCCGctgttgccgccgctgccaGCTGCAACAATGACTAGCAACGCCGCTGCTACTAGCGCTGCTTCTGCCACTaacgctgcctctgcctctgccgcagccgcagtcACGACTCCTCTGCTCATGCCGCCGCTGCCCGCCGTGCCCATCAAGGATGAGCCCATTGACGAAACGGATGATGACTTTCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAGGGCGATGTGCCACTAATGACCTCCGACTACGATTACACGGCGCAACACGGCGTGACGGCGGTTGCGGCGGCGGCATCGCTACCCGCCAGCGCGGTTGCAAACGTGGCCGCCGCTGGCGACTCAAAGGTGGCCAGCTGTCGGGCCTGCAGTCTGCAGTTCTCGACGCGCGCGAATGCCCGACGCCACGAACGCAATCTGCATCCGAATCTGTTTCAATTGTCGACAGATTCACCCAACAATACGCCCATCACAAAACCGACGCCCGCACTTGCCGCCGCCCTGGAAATTCAACGTGccgcagcggcggcagcagccacCGCGGAGGCAACCAAAGCCGCCGCCGGCGGTAACATATCAGCGCAAAAGTATCGCCAGGTGGTAATGAATACGTTCATTAAATGCGAAAATGGCGGCTTCGACTACGACAATCCGGAGCAATATCAGCAGCTGCTCACCCGCGACAAGGTAGAGTTCCTACAGGAGAACAACGAGTTTCTGGAACAATACCAAACAATGACGTGTCGCTGCTGCAATAAGTACTTCAATACCTACAAGAACTTCATGGCGCACGTGCGTAAAAAGTATCCGCTGCTGCCGCGCAATCTGTGCTTCAATTGCCTCAAGATGAACGACTCGAAGGCTCTGTTCATATCGCATTTGAAGAAGCGTAACTGCATAAATCTGTATCGCGTGCTGAACGCGCTGCGTCTGAAGCAACCCAATTTTTCGCACGCCAATGCATCCGGTGTGGCTGTAACGGCCGATTTGAGTGTTGGCCAggccgcagcagcggcagcatcggCACATGAAACGTCATCGGAGCGACCGGAGAAGCTGCGTGCCAAGGAATTGTTGGTGAACAAGCTGTACGAGTGCAAGCTGTGCCCAAAGGGCTTTCGCACCAAGCACGAGTTCCGCACCCATGTCTATGACAAGCATGCGGATGTGCAGCGTAAGGATAACTATTCGATACAGTGCACCTTCTGCGGACTGGACTTTGCCGATCCCGTGGATCGACGTCGCCACTACAACAACATGGAGTGCATTGTGCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCATCAGCGCTTCCTTGATCACGTCTACCAGGATCATCTGGGCGGCGTGAGCAGTGATAATGCCTCGACGGCCAACAGCGGCATGGACCATTCCCCGGGCAAACGCAGCCTGTTGGGCGCCTTGGGCATTGGCATAAGTCAATCATCGAATGATGAGTCACGCAGCAGCACCCagcacaacaataataatgctgTGGATGCAGCCTTCACCTCGACACCGAAGCCAGCTGGAGCAGCGGGCGGCGCAGCAacatctgctgcagctgcatcggCGGTCAGTGGCGGCTCCACGTCCGGCAGTCGCGATGCACCCAAATCGCAGTATTTCTCCCGCATGCCACAGGTGTGCCCCATCTGTGGGCAACAGTACAACAACTATAACAACGTGCTGCGTCACATGGAATCGAAGCATCCCAACAAGCTGCCCGAAACGTACAAGTGTGTGCGCTGTGGCCTGGGTTATCCGCGAATCTCCTACCTTCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCGGGCGGCTTTGAGTACATTGTGAATGCGGATGCAGTGAAGCTGGCCGATGGCAGCATGCCCAATGTCTATACGGGCCGTTATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTcgatgatgatgaagaggAAACCGGAAGCGTTGCCAAAAAGATGCGATTggatgacagcagcaacaacagcagcatcaacatgAGCATTGCCAATCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTCAGTAACAACATTGGCCTGTCGAATCACATGCGCTCGCATTATACGGCCGCAACGGCAACGAATGCAGCACTGGCGGCTGCCAATCGCATGACGCCCAAATCTTTGACAATTACCGCAACGCCGCCATTGGAGACGACAGCAACGTCCACGAGcgctgcagcaacaaaagcgtctgccacagcagcagcagcagttgcagcgaCAGGAACAACATCGGGAGCAGCTGtcgctggagctggagcagcaacaacgggCTCTGGTAGTCTGCCACCCGCAATGGTGCATCAGACGCCACAGGAGCAAGCCGTGTTCCGGCGCAGCCTGGATCAGGCGGCCGATCGTCGCTTTCGCCGAATGCGCTGTCGCATCTGCCAACGTCGCTTCAGCTCAAAGAAATCCTATCGCTATCACATGCTCACCGACCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCCGAGTTTGCCTACGAGAAGGGTCTGAAGGTGCATCTATTCAAGGTGCACGGGCGCGCCATCAAGGACGAGATGATTGTGAAGCAATTCGAGTGCGACATTTGCTCGATTGTCTACAGCTCCGAgatggagctgcagcagcacaagcGCAGCGTACACAAGTCCCATGATGCTGCCTCCTCCAAATCATCAACAACCAAATTATCTAGCGCTACCTCAGCTTCTGATCTGGCGGACACATCCGGTGCGGGTGCAAGTGCGGGAGTGGCCACCGGTGCGACCGCAATGCCGCTCTACTGGTACCAGTGCAAGTACTGCCCCTCAAATTTCAACACCAACAAGAAGCTAGCCATTCACATCAATTCGCACGACGAGTTCGATTCGAATGATTATTCGTGCAAGGATTGCGGCAATGTTTACAGCGGACGCAAGAGCCTCTGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCAGATCCAGTTGAGTGCACGCTTTGTCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACACCCACCTGCAATCGAAAGCCCATCACTGCCACTGGCGCCCATCAGCaggatcagcagcagcaacatcagcaacaacaacaacagcgagccATATTCAAGCATAAAACGggcgacgatgacgatgaggaAGAGGACGATCAACTGATGCTGCTGGACGATGGTGGCattggcagcgacagcaatgGCGGTAGCAATGCACCGGCTACggccaccaccagcagcagcaacaacaatccaAATACGATAAATGCGAGCACACTGAAGATACGCATACCGGAGGTGGCATGCACCATCTGTGGGGCACGCTTCACCGACCAGGAGATGTTCACCAAGCACATACAGAAGCACGAACAGGACCTGTATGTGGACAATCCATTGGCGGCCATGTTCGATGATGGCCCAGCCGATGTGGGACAATTCAAGGTGGAGCGCCAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGaatctCATCATCGACGGCGAAGCGACAACGctgaacaacagcagcaacaacaacaacaacaacaattcactGAGCTCCTCGTCGATGCTACGCGAGCTGCATGCAGTGGGCCTGATGCCcaaccagcaacagcaccagaagcaactgcaacagcagcaacaacaacagcagcaacagcggaaCAACACGTCGAGCAGCTCGAGCAAATCGATGAAGCGAAAACGTGAACTGAAATGCGAATACTGCGCCTCCACATtcattagcaacaacaacctgCGACGCCACATGTACGAGCTGCACAAGCATGAAGTCAGCAATCTGCCAGAGCCGCCAGTCATTGAGGTGGATGAGCCGCTGACGTGCCGTCGTTGCGGCGATATACGCTTCGATACCAAAGAGCTGTGGATCGAGCATAAGCTGGCGGACGCCAAAGTGGTGCGTCCCTTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTACTTATCTCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAAGAGGATGTGATAGTGCCGGTGGCAGCAGCCAACAAGGCGGTGTTGCCAGTGCTGCCCAATAAGAATGCAACGGCAAAGAcaacagctggagcagcagcagcagcagcagcaggtggtacagcagcaacaacagcagtagcgACAGCCAAGGGAGGTATAGTTAGAGCGGCGGCACCAGCTGGCGGCAGAGCGAATAAGAGCAAACAGCAGCTGGAGGAGCAGCTGACCATGAAGGTGgcaacaaagcagcagcagcagcagcagcaggaacagcaacagcagcagcaagttgataatgatgataatgctGAGCAGGATGATGAGGAGGATGGCAGTGATatggatgatgatgatgatgaggatgataGCGATAGTGGCGATGGAGAGAGCACAAGTgcggatgatgatgatgaggacgatgatgacgatgaggGCGACGtggacgacgatgatgatgatgaagatgaagatgtgGATGGCGGTGTTGTTGAACAACAATTGctacagcaaaaacaacaacagcagcagcagcaggaacaacaacaacagcagcagcagcaacaacaacaacaacaacaacagaacctcaacagcaacagcgtgGCTGCCcacgatgatgacgacgatcTCATTGAGGAAGTCATCGAGGAGGATGGCATGGTCGAGGAGCTGGATGACGATGAGGACGATGAGGGTGATGACGATGGCAACACAACCGATGAGCATCAGCAGCTGGCAACCaatgccaagcagcagcagcagccgagacGCCTCAACTTTGACTATGCGAGCGCCGGCAGCGCCAAGCtgaatggcaatggcaaacaGACGCCGCAGCAGCTGGCCAAGTCGGAGGGACAATCGGGGGTGCTGGTAATGCATAGCTccgatgaggatgaggatgttggtgaggatgatgatgatgaggatggtGTGGAGGGTGAAGCGATGACCATTGATGATATTATTGAGGAAGATGATGGGgaggatgaggatgacgaTGTGGTTGGTGTCGATGGTGGTGTTGTTgaggacgacgatgatgatgatgatgatgatgatgatgatgttgggGAAGATATGGATgaggatgatgacgatgatgatgatgaggacgatgaggaagatgatgatgacgacgatggCGTCAATATTGGCAACAAAAATCGTCGTCGCGACGGTGCTGTGATGGTCAGCGGCATCAGCATTGGCGACGGTGAGGCTGATGCCGATGCTGATGGTGATGTGGATGGTGATGGTGATGGTGATGTGGATGCTGATGCTACATCATCATCGGGCAGCGAGTCAACAACATCGCATTCAATTGGTGAGCGGCGTAAAAAATCAGTAGTTAAATCAGTGGCACATGGCGCTGCCGTTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCAACTGCAGGCACATATTAAAAGCCATTTTCTGAATGGGCCGTCGGcgggtggcagcagcagcagcggcagcagcggcaacgccagcaacagcagaagaaTCGGTGCAGgggctggcagcagcagcagcagcagcggcggcggcggcggtggcgtcggcagcggcagcggtggcaacagcagcaggagcagcagcaatagcagtagcaccaacaacaataacaataataacaacaacaataataataataataacaaaagcaaaaccaaaaagtCCGGCTTGGATGCAGCGATTGGTGATAGttcggcagctgctgctgcaacagcatcaacaaccacaacaactacaacgacaacaagatcaacgacagcaacagttgccgctgcagcagctgcagcaacagcagctgctgacgCGGCAAACAGCTTGAACTGA
Protein Sequence
MVARCSATATTTTVALWTAPPATTSSSTSASSQQSLSTRCCCVCLITPLDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDSDKSKQQTLLGYLDLNKTENGSAIEQQQQQQHESNIDSAMTAAEKASANILDGIPSLKKRKSLTVYVSPKQQLQQQQQLQQLQQQQQQQQQQVQHAARATSAAAESQQTLQTLLLQVPSVAATSAQQQQQQQQQQRKYQQHQQQRVKQQHYQQQHHQSQQQQHQRLSRIRQPRRQQQATMSAQRMVRFKPKLYLPLDIAVPPLPPLLPTPTSTQQQQQPETVAAGAKLAPLPLPLSLPLDFSQSQCQHPNPNQSQQKHGNVLPLPLPLPPSTPLLPPLPAATMTSNAAATSAASATNAASASAAAAVTTPLLMPPLPAVPIKDEPIDETDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLTRDKVEFLQENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRLKQPNFSHANASGVAVTADLSVGQAAAAAASAHETSSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNYSIQCTFCGLDFADPVDRRRHYNNMECIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGMDHSPGKRSLLGALGIGISQSSNDESRSSTQHNNNNAVDAAFTSTPKPAGAAGGAATSAAAASAVSGGSTSGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSMPNVYTGRYDYVMKDLMSITNGGTLDDDEEETGSVAKKMRLDDSSNNSSINMSIANQQKECLICNAVFSNNIGLSNHMRSHYTAATATNAALAAANRMTPKSLTITATPPLETTATSTSAAATKASATAAAAVAATGTTSGAAVAGAGAATTGSGSLPPAMVHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDICSIVYSSEMELQQHKRSVHKSHDAASSKSSTTKLSSATSASDLADTSGAGASAGVATGATAMPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPVECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQHQQQQQQRAIFKHKTGDDDDEEEDDQLMLLDDGGIGSDSNGGSNAPATATTSSSNNNPNTINASTLKIRIPEVACTICGARFTDQEMFTKHIQKHEQDLYVDNPLAAMFDDGPADVGQFKVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNLIIDGEATTLNNSSNNNNNNNSLSSSSMLRELHAVGLMPNQQQHQKQLQQQQQQQQQQRNNTSSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDIRFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVAAANKAVLPVLPNKNATAKTTAGAAAAAAAGGTAATTAVATAKGGIVRAAAPAGGRANKSKQQLEEQLTMKVATKQQQQQQQEQQQQQQVDNDDNAEQDDEEDGSDMDDDDDEDDSDSGDGESTSADDDDEDDDDDEGDVDDDDDDEDEDVDGGVVEQQLLQQKQQQQQQQEQQQQQQQQQQQQQQQNLNSNSVAAHDDDDDLIEEVIEEDGMVEELDDDEDDEGDDDGNTTDEHQQLATNAKQQQQPRRLNFDYASAGSAKLNGNGKQTPQQLAKSEGQSGVLVMHSSDEDEDVGEDDDDEDGVEGEAMTIDDIIEEDDGEDEDDDVVGVDGGVVEDDDDDDDDDDDDVGEDMDEDDDDDDDEDDEEDDDDDDGVNIGNKNRRRDGAVMVSGISIGDGEADADADGDVDGDGDGDVDADATSSSGSESTTSHSIGERRKKSVVKSVAHGAAVDQSNSSYTCDLCQLCFDSQEQLQAHIKSHFLNGPSAGGSSSSGSSGNASNSRRIGAGAGSSSSSSGGGGGGVGSGSGGNSSRSSSNSSSTNNNNNNNNNNNNNNNKSKTKKSGLDAAIGDSSAAAAATASTTTTTTTTTRSTTATVAAAAAAATAAADAANSLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476771;
90% Identity
iTF_00599728;
80% Identity
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