Ddia010588.1
Basic Information
- Insect
- Dasypogon diadema
- Gene Symbol
- -
- Assembly
- GCA_006980735.1
- Location
- jcf7180002952464:11029-12987[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.005 19 5.2 0.1 21 46 203 228 197 234 0.81 2 10 0.012 47 4.0 0.2 21 49 231 258 227 261 0.81 3 10 0.00038 1.4 8.8 0.7 18 45 255 282 248 290 0.87 4 10 0.3 1.1e+03 -0.5 0.1 21 45 286 310 282 313 0.87 5 10 0.002 7.5 6.5 0.2 21 45 314 338 310 345 0.88 6 10 1 3.8e+03 -2.1 0.1 21 33 342 354 338 368 0.72 7 10 0.0026 9.8 6.2 0.1 21 46 370 395 354 401 0.83 8 10 0.026 1e+02 2.9 0.1 21 43 398 420 394 425 0.86 9 10 6.3e-05 0.24 11.3 0.0 21 52 426 457 415 458 0.84 10 10 2.1e-07 0.00078 19.3 0.4 22 48 455 481 450 483 0.90
Sequence Information
- Coding Sequence
- ATGGCTGGGAAGATGTTGGAGATGAAAAGCATTTTGCTGGCTGACTTTACGGCCGACAGTTGCAGCAGTTTTTCCATGGGTGAAGACAGTCGGTCTTCCGATTTCATGCTAACTGAAGACATGATTAAAAAAGAGCCGGAATTTATAATTGAAGATGAGGAGGAGGGCGAGAAAATAAGGAGTTTCTTGAAGAAAACAAAAATCAACGACCAGGATAGGAAGAACTTGGAGTGGCATAATTGTATTATTTGCGAGAAAAGGTTCCTCAATGTTGAAGAATTGTCTCTGCACGTTCAAGGCCACATTAAGAAGGAAAACCCCGATGAGGGGAGAGTATTAAACCACAGGCAAGCACCGAAAACTCAACTTACAGGATTCACCCGGGAGGAGTGTTTCAGGGATTACGTGAAAATAAAGGTGAATTTAGACGGAGATCCAACATATACGTGTAAGTTGTGCGTTGATAAACATTTCACTAAGCTAGTCGGTATCCAAAACCATATGAGAATCCACCAGAACCCCATTTACAAAGAACGCAACTGCCATGTGTGTAAGAGGACTTTTCTAAGGCGAGACACGTTGCTGGTCCACCTGCGGACACACACGCAGGAGAGACCATTTAAATGTGATATCTGCCAAGCAACATTTTCCCATTCGAGTTCCTTGGTGTCTCACAAGAGGATCCATACCGGCGAAAAGCCCTATGCGTGCGATGTTTGTCAACAAACGTTCAGAGAATCTGGCCAAATGTCAGCCCATCGAAGAACCCACTTTGAAAAAACACTAAAATGCCCACAATGCAATCAGTACTATGCCTCGTCGAAGAATCTTCGAGCCCACCTTAGAACACATACAGGAGAAAGGCCCTACAAGTGCCTACGATGCGAAAAATCGTTCCGAACCTCCACAGCACTTACAATGCATATCAGGGTGCATACTGGGGAGAGACCGTACAAGTGTCCACATTGTCCATACGCTACAAAGCAATCGGGTTCACTAAAGTCTCACATGCGGACTCATACCGGAGAAAGGCCCTACAAATGTGATGTATGTGATCGGGCGTATACGGAAAAGAAACGCCTGGTCACTCATTACCGCACGCATACGGGGGAGCGGCCCTACAAATGTGATCACTGTGACTCTGCATTTGTTCGCAGTGATAATCTTCGCAGTCACATCCGAACCCACACCGGCGAGAAGCCATTTCAATGCGAAATTTGTCAGAAGGCATTTGCTCAGAAAACCACTCTGAAAGCTCATGAGAAAGTTCATTCCGGTGAAAGGCCTTACGCTTGTCCCTTTTGTGAACTATCATTCCGACAGTCGGGCACTTTGGTCACACACATGCGTATCCACGATGATCAAAAGCCGTTCCCGTGCCAAATATGCGACAAAAGTTTTAGACAAAGCAGCAATCTGCGCAGACATATTCAAGTGGACCATGGTGAGGTACATGAAAAGTTATTCTAG
- Protein Sequence
- MAGKMLEMKSILLADFTADSCSSFSMGEDSRSSDFMLTEDMIKKEPEFIIEDEEEGEKIRSFLKKTKINDQDRKNLEWHNCIICEKRFLNVEELSLHVQGHIKKENPDEGRVLNHRQAPKTQLTGFTREECFRDYVKIKVNLDGDPTYTCKLCVDKHFTKLVGIQNHMRIHQNPIYKERNCHVCKRTFLRRDTLLVHLRTHTQERPFKCDICQATFSHSSSLVSHKRIHTGEKPYACDVCQQTFRESGQMSAHRRTHFEKTLKCPQCNQYYASSKNLRAHLRTHTGERPYKCLRCEKSFRTSTALTMHIRVHTGERPYKCPHCPYATKQSGSLKSHMRTHTGERPYKCDVCDRAYTEKKRLVTHYRTHTGERPYKCDHCDSAFVRSDNLRSHIRTHTGEKPFQCEICQKAFAQKTTLKAHEKVHSGERPYACPFCELSFRQSGTLVTHMRIHDDQKPFPCQICDKSFRQSSNLRRHIQVDHGEVHEKLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00424807; iTF_01184194; iTF_01050052; iTF_00628549; iTF_00717958; iTF_00718188; iTF_01049836; iTF_00628782; iTF_01183982; iTF_01461331; iTF_00937687; iTF_01461563; iTF_01256766; iTF_01256543; iTF_00937472; iTF_00455353; iTF_00455594;
- 90% Identity
- iTF_00424807;
- 80% Identity
- iTF_00424807;