Basic Information

Insect: Dysmachus trigonus
Gene Symbol: -
Assembly: GCA_949715965.1
Location: OX454320.1:27564114-27565601[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.017 3.2 9.7 0.2 1 23 150 173 150 173 0.94

2 12 0.00027 0.053 15.3 3.6 2 23 182 203 182 203 0.98

3 12 8.2e-06 0.0016 20.1 1.1 1 23 209 231 209 231 0.99

4 12 1.8e-05 0.0035 19.0 2.4 1 23 237 259 237 259 0.99

5 12 1.2e-06 0.00024 22.7 0.9 2 23 265 286 264 286 0.97

6 12 1.8e-07 3.4e-05 25.4 2.0 1 23 292 314 292 314 0.98

7 12 7.2e-07 0.00014 23.4 0.6 1 23 320 342 320 342 0.99

8 12 0.00011 0.021 16.6 2.6 1 23 348 370 348 370 0.99

9 12 1.1e-07 2.2e-05 26.0 1.0 1 23 376 398 376 398 0.99

10 12 1.5e-07 2.9e-05 25.6 0.2 1 23 404 426 404 426 0.98

11 12 1e-07 2e-05 26.1 0.3 1 23 432 454 432 454 0.98

12 12 1.4e-06 0.00028 22.5 3.0 1 23 460 483 460 483 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.017	3.2	9.7	0.2	1	23	150	173	150	173	0.94
2	12	0.00027	0.053	15.3	3.6	2	23	182	203	182	203	0.98
3	12	8.2e-06	0.0016	20.1	1.1	1	23	209	231	209	231	0.99
4	12	1.8e-05	0.0035	19.0	2.4	1	23	237	259	237	259	0.99
5	12	1.2e-06	0.00024	22.7	0.9	2	23	265	286	264	286	0.97
6	12	1.8e-07	3.4e-05	25.4	2.0	1	23	292	314	292	314	0.98
7	12	7.2e-07	0.00014	23.4	0.6	1	23	320	342	320	342	0.99
8	12	0.00011	0.021	16.6	2.6	1	23	348	370	348	370	0.99
9	12	1.1e-07	2.2e-05	26.0	1.0	1	23	376	398	376	398	0.99
10	12	1.5e-07	2.9e-05	25.6	0.2	1	23	404	426	404	426	0.98
11	12	1e-07	2e-05	26.1	0.3	1	23	432	454	432	454	0.98
12	12	1.4e-06	0.00028	22.5	3.0	1	23	460	483	460	483	0.95

Sequence Information

Coding Sequence: ATGGCTGGGAAAATGCTCGAGATGAAGAGCATCCTTCTGGCGGACTTCACAGCGgacagctgtagcagcttttcaGTCGGGGATGATAGCCAATACTCGGATTTTCTGCTAACAGACGACATGATCAAGAAGGAGCCCGAATTCATCATCAACGAGGACGAGGCAGAAGGTGAGAAAATTCGCAGTTTCTTGAAGAAAACTGCAATTGACGACAACGACAGAAAGAATTTAAAGTGGCATAATTGTATTATATGCGAGGAGCGCTTCCTTAATATCGAAGACTTGTCCCTTCATGTCCAAGGGCATATAAAGAAGGAGAAGGTGGACGACGTCGAGAAGGCGCTTAATCATCGGCAGGCACCGAAGACCCAACACACAGGTTTCTCGCGTGAGGAATGCTTCAGGGACTATGTTAAAATTAACGTCAATTTAGACGGCGATCCAACGTATTTATGTAAGTTGTGCAATGGTAAGCCTTTCACAAAGCTTATAGCCATCCAGAATCACATGCGTATCCACCAAAGTCCCATCTACAAGGACAGAACATGTCACGTTTGTAAAAGGACCTTCCTAAGAAGAGACACGCTAATGGTTCACCTGAGGACACACAGTCAAGAACGACCCTTTAAGTGCGACATGTGCAGTGCAACATTTGCCCACTCCAGCTCCTTGGTGGCCCATAAGAGAATCCATTCAGGGGAGCGACCCTATGTATGTGACATTTGCCATCAGTCTTTCCGGGAATCCGGGCAGATGTCGACTCATCGAAGGACACATTTCGATAAAACCCTCAAATGCCCTCAGTGCAATCAGTTCTATGCATCTTCCAAAAATCTAAGAGCCCACCTCCGCACCCATACCGGGGAAAAGCCCTACAACTGCATGCATTGTGGAAAGAGTTTTCGGACGTCCACAGCACTAACTCTACACATCCGAGTACATACTGGCGAAAAACCGTTCAAATGCCCTCAGTGCCCCTATGCCACGAAACAGTCTGGATCGCTTAAGTCTCACATCAGGACCCACACAGGTGAGCGCCCTTTTAAGTGCGATCTTTGCGAACGTTCCTACACTGAGAAGAAGCGCCTTATCACCCACTACAGAACACACACGGGCGAGCGACCCTACAAGTGTGACTATTGCGACTCTGCATTCATTCGGAGCGATAATCTGCGCAGCCACCTCAGAACTCACACTGGAGAAAAACCGTTCAAGTGCCCCGACTGCCCAAAGGCTTTCGCCCAAAAGACAACCTTGAAGGCCCACGAAAAGGTCCATTCTGGAGAAAAGCCTTACGCTTGCCCCTTCTGCGATCAGGTATTTCGCCAGTCGGGCACCCTGCAGACGCATATGCGAATTCACGATAATGAGAAGCCATTCCATTGCCAGCTTTGCGACAGAAGTTTCCGGCAGACAAGCAACCTCCGACGGCATATAACAATTGACCACAACATGGTGATGGAGGAGCAGCCCTTCTATAGTCACTAG
Protein Sequence: MAGKMLEMKSILLADFTADSCSSFSVGDDSQYSDFLLTDDMIKKEPEFIINEDEAEGEKIRSFLKKTAIDDNDRKNLKWHNCIICEERFLNIEDLSLHVQGHIKKEKVDDVEKALNHRQAPKTQHTGFSREECFRDYVKINVNLDGDPTYLCKLCNGKPFTKLIAIQNHMRIHQSPIYKDRTCHVCKRTFLRRDTLMVHLRTHSQERPFKCDMCSATFAHSSSLVAHKRIHSGERPYVCDICHQSFRESGQMSTHRRTHFDKTLKCPQCNQFYASSKNLRAHLRTHTGEKPYNCMHCGKSFRTSTALTLHIRVHTGEKPFKCPQCPYATKQSGSLKSHIRTHTGERPFKCDLCERSYTEKKRLITHYRTHTGERPYKCDYCDSAFIRSDNLRSHLRTHTGEKPFKCPDCPKAFAQKTTLKAHEKVHSGEKPYACPFCDQVFRQSGTLQTHMRIHDNEKPFHCQLCDRSFRQTSNLRRHITIDHNMVMEEQPFYSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00425042;
90% Identity: iTF_01184194;
80% Identity: iTF_00628782;