Cang010073.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_030157275.1
- Location
- CM058062.1:11546649-11551618[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-114 1.1e-110 369.9 35.2 1 300 70 367 70 367 0.97 2 2 0.014 1.6e+02 1.7 3.3 120 171 365 416 364 427 0.84
Sequence Information
- Coding Sequence
- ATGACATTATTCGGTACTGTGAGGTGTCGGTTCTTTAGCGAGAAAATTATCAGGACAATGGTGGCTGCACCGGAAGTAGTAGTGCATTCTAAATGGGGCCATCAGATACAAAGAAGTCCTTCGTTAAGCGATTGTCTTTCGGAAAGTGAAGATGCGCCTCCAGCTCATGTTCTGTTTGTGACGACGGTTTCGATGTGCAAGAAAAATGCAGAAGCACGTCTGTGGGCCAAAAGACAGGCTCGAGCTGAAGCGAGGGAAATACGTATGCGCGAACTGGAGAGACAGCAGAAAGAACAAGAAGAAAATGCTGACCGACAATTTGATATGTTATCTGAACCAATCGCGCGAACGACGAGGACGTCGGCGAGTGGTAGTAGGTTCTTATCCAGTAGAAGGAGCTCCGAAGACTCGTTGGAAGACGGTGGCAGTCTCAGGGATATGCGGAATGAACTGAAGGAATACGAAGAGAAATTCCGAAAGGCGATGATCGCCAACGCCCAACTCGATAACGACAAAACATCTCTCACATATCAACTGGAGTTACTTAAAAATAGGATAGAAGAATTGGAAGAAGAGCATTCTCAGTTGAAGCGAGAACACCGAGAGGAGTGTCGAGCACACGAACAATTAAAACGATTGTGTGCCAAACTAAAAGAAGACTTGGCTGTGACTAGGGCAGAACTCGAAGAAAGAGACCAGTTAATAAGTGAAAAAGGTTTAGTCATCGTCGGAGAAGACTCCTTCAATGAAGAAGAACAAATCAACGGTGCCGTTAGTCTCAATAATAGTATAGGAACACCGAAAAAAGCGTTAGTTAGTATAGAAAATGCTCAGTTGCTAGAAAGTGCAGGTGAGGGAAGTTTAGACGTGCGACTGGCGAAGTTCATGAAAGAAAAAAGCGAGTTACAAGATCAGATTAGCCATTTAAAATTAGAGTTAGAAGAAGAACGAagcaagaagaaaaaatcgaattctgtGAATACACTCAACGGACCATCTTCGGATCACGACGTCGACGAAATAGACATACAAAGAGAGGCAAGCAAACAACTCGGGGACTATAAATTCCGAGCCCAAAAAGCCGAACAAGACGTCGCTACTTTACAAGCGACGGTGGCGCGGCTAGAAAGTCAAGTTATTAGGTATAAAGCGGCGGctgaaatttcagaaaaagcTGAGGAAGCTTTAAAAGCCGAAAAACGAAAGATGCAAAGAGAGacgaGGGAAGCTTTAAGCCGAGTAGAAGAACTAGAAACATCAAATACACATTTATTAAAACGGTTAGATAAGTTGAAGAATGCGAAATCAGCGTTACTGAAAGAACTTTGA
- Protein Sequence
- MTLFGTVRCRFFSEKIIRTMVAAPEVVVHSKWGHQIQRSPSLSDCLSESEDAPPAHVLFVTTVSMCKKNAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPIARTTRTSASGSRFLSSRRSSEDSLEDGGSLRDMRNELKEYEEKFRKAMIANAQLDNDKTSLTYQLELLKNRIEELEEEHSQLKREHREECRAHEQLKRLCAKLKEDLAVTRAELEERDQLISEKGLVIVGEDSFNEEEQINGAVSLNNSIGTPKKALVSIENAQLLESAGEGSLDVRLAKFMKEKSELQDQISHLKLELEEERSKKKKSNSVNTLNGPSSDHDVDEIDIQREASKQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEISEKAEEALKAEKRKMQRETREALSRVEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752966; iTF_00167651; iTF_00852680; iTF_00870576; iTF_01480117; iTF_01480885; iTF_01567904; iTF_00639546; iTF_01409996;
- 90% Identity
- -
- 80% Identity
- -