Tmol008495.2
Basic Information
- Insect
- Tenebrio molitor
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963966145.1
- Location
- OZ014540.1:15882897-15890324[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-116 2.8e-112 375.5 35.1 1 300 108 403 108 403 0.97 2 2 0.049 6.8e+02 -0.1 4.1 120 173 401 451 401 469 0.77
Sequence Information
- Coding Sequence
- ATGGTTTTATTTGGTACTGTGAGGTGTCGTTTTGTACGCGAAAAAATCATCAGAACAATGGTGGTCGCACCGGAAGTAGTAGTGCATTCCAAATGGGGCCGTCAGATCAGCAGGAGTCCGTCGTTGAGCGACTGTCTTTACGAGAACGCTCCAGCTCACGTTCTGTTCGTGACGACGGTTTCCATGTGCAAGAAAAATACGGACACTGTTAAAATCGACGGCGTCACGAAAACGGAAAGTTCATCAGATTTCGATGGACCTCGACGGCAAACTGACACAAACGATGTCATCCAACGCGTGATGAAAAGCACTAGCGATAAAGCAGAAGCACGTCTTTGGGCCAAACGACAGGCCAGAGCTGAAGCAAGGGAGATACGTATGCGCGAGCTGGAGAGGCAACAGAAAGAACAAGAGGAAAATGCCGACCGACAGTTCGACATGTTGGCCGAACCGATGGTCAGGACGGCGAGGACGTCTACTGCTGGAAGCAGATATCTTTCCAGCAGAAGGAGTTCCGAAGACTCCCTGGAAGACGGAGGCGGTCTTAGGGATTTACGGAATGAATTGAAGGAGTATGAAGAAAAATTCCGAAAAGCGATGATTGCCAACGCCCAACTCGATAACGACAAAACCTCTCAAACATATCAACTGGAGTTACTTAAGGATAGGTTAGAAGAATTAGAAGAGGAGCATTCCCAGTTGAAGAGAGAGCACCGCGAAAAGTGCCGCGAACACGACCAGCTGAAACGGCTGtgcgccaaattaaaagatgATTTGGCTGTGGCTAGGACGGAACTAGAAGAAAGAGATCAACTGATAAGTGAAAAGGGTTTGGTAATCGTCGGCGAAGATGTAATCAACGAAGAACAAAGAAACGGCGATATCAGTCTTAGTAGTATAGGTACACCGAAGAAGGCTTTAGTTAGTGTAGAAAATGCCCAATTATTACAAAGTGCGGGAGAGGGTAGTTTAGACGTGCGGTTGGCGAAATTCATGAAAGAAAAAAGCGAACTGCAAGATCAAATTAGCCATTTGAAATTAGAATTAGAAGAAGAAAGGAGCAAAAGGAAAAAGTCGAATTCGGTGAATACATTAAACGGACCATCTTCGGATCACGATTCGGACGAAATCGACATACAAAGGGAGGCTAGCAAGCAACTTGGTGATTACAAATTTCGAGCTCAAAAAGCGGAACAAGACGTTGCTACTTTGCAAGCTACTGTGGCGAGGCTAGAAAGTCAAGTCATCAGATACAAAGCGGCGGCTGAAGTTTCAGAAAAGGCCGAAGAAGCGCTCAAAGcagagaaaagaaaattacaaagagAGGCGAGGGAAGCGTTAAGTAGAGCAGAAGAGCTGGAAACATCAAACACACATCTATTAAAACGATTAGATAAATTGAAGAACGCAAAATCGGCATTGTTGAAAGAACTTTGA
- Protein Sequence
- MVLFGTVRCRFVREKIIRTMVVAPEVVVHSKWGRQISRSPSLSDCLYENAPAHVLFVTTVSMCKKNTDTVKIDGVTKTESSSDFDGPRRQTDTNDVIQRVMKSTSDKAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPMVRTARTSTAGSRYLSSRRSSEDSLEDGGGLRDLRNELKEYEEKFRKAMIANAQLDNDKTSQTYQLELLKDRLEELEEEHSQLKREHREKCREHDQLKRLCAKLKDDLAVARTELEERDQLISEKGLVIVGEDVINEEQRNGDISLSSIGTPKKALVSVENAQLLQSAGEGSLDVRLAKFMKEKSELQDQISHLKLELEEERSKRKKSNSVNTLNGPSSDHDSDEIDIQREASKQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEVSEKAEEALKAEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415112;
- 90% Identity
- -
- 80% Identity
- -