Zmor017210.1
Basic Information
- Insect
- Zophobas morio
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027724725.1
- Location
- JALNTZ010000008.1:2884614-2904911[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-115 2.4e-110 369.7 34.7 1 300 172 468 172 468 0.97 2 2 0.022 9.3e+02 0.1 4.8 120 175 466 518 465 542 0.76
Sequence Information
- Coding Sequence
- ATGGTTTTATTCGGGACGGCGAGGTGTCGTTTCGTCAGCGAAAAAATCATCAGGACAATGGTGGCCGCCCCGGAAGTGGCCGCCCAGTCGAAATGGGGCCACCAGATACAGAGGAGTCCCTCGCTGAGCGACTGCCTCTACGAGAGCGCCCCGGCTCACGTCCTGTTCGTGACCACGGTGTCCATGTGCAAGAAAAATGTGAGTATGGGCGGTGATAAGCATGAGCCGCCCGCCCCGCCGATTCCGTCCGACCGAAACGTAACGGCAAAATGTAAAAACAACGACACTCTTATCACCGCCGATAAATTATCGCGCCGCGATAAGAAACGTCCGCTTGGGTACGGTCGCGCGTCTGTAAAAACCGACTTTTCCGAAAAAATGACGGACCCCGAGGCCAGGCTCGAGGTCGAGGGGGTGACCAAGTCGGAGAGTTCGACGGACGGCGACGGTCCGAGGGCGCAGGCCGCCGCCGACGATGTCATCCACCGGCTGATGCAGGACACCACCGACGAAGCGGAGGCACGTCTGTGGGCCAAACGGCAGGCCAGAGCTGAGGCGAGGGAGATACGTATGCGCGAGCTGGAGAGGCAACAGAAGGAGCAAGAGGAGAATGCCGACAGACAATTCGACATGCTGTCCGAGCCGATGGCGAGGACGGCGAGGGCGGCCGGGGGCGGCAGCAGGTACCTGTCGAGCAGGAGGAGCTCGGAGGACTCGCTGGAGGACGGGGGCAGTCTCAGGGATTTGCGGAACGAACTGAAAGAGTACGAGGACAAATTCCGCAAGGCGATGATCGCCAACGCCCAACTCGACAACGACAAAACCTCTCTAACATATCAGCTGGAATTATTCAAAGATCGGATAGAGGAGCTCGAAGAGGAGCACTCCCAGTTGAAGAGAGAGCACCGCGAGAAGTGCCGCGAACACGACCAGATGAAGCGGCTGTGCGCGAAAATGAAGGACGACTTGGCTGTGACCAGAGCCGAACTCGAGGAGCGGGATCAGCTGATCAGTGAGAAGGGCCTGGTGATCGTCGGCGAGGAATCAATCAACGAAGAGGAACAAAGAAACGGCGACACCAGCCTCAATAGTATAGGTACCCCCAAGAAGGCCTTAGTTAGTGTAGAAAATGCCCAGTTGCTGGAGAGCGCGGGCGAGGGCAGCCTCGACGTGCGGCTCGCTAAATTCATGAAAGAAAAAAGCGAACTACAGGATCAGATTAGCCATTTAAAATTAGAATTAGAGGAAGAGAGGAGCAAGAGGAAAAAGTCGAATTCGGTGGGCACGTTGAACGGGCCGGCGTCCGACCAAGATCTAGACGAACTAGACATACAAAGAGAGGCTAGCAAACAACTCGGCGACTATAAATTTCGGGCTCAGAAGGCTGAACAAGACGTCGCTACGCTCCAAGCCACGGTTGCGAGGCTAGAAAGTCAGGTGATTAGGTATAAGGCGGCGGCCGAGGTTTCCGAAAAAGCCGAGGAGGCGCTCAAAGCAGAGAAGCGAAAGTTGCAGAGAGAGGCACGTGAGGCTTTGAGCAGAGCAGAGGAGTTGGAGACGTCAAATACGCACTTATTAAAACGGTTAGATAAGCTGAAGAACGCGAAGTCGGCGTTGCTGAAGGAACTTTGA
- Protein Sequence
- MVLFGTARCRFVSEKIIRTMVAAPEVAAQSKWGHQIQRSPSLSDCLYESAPAHVLFVTTVSMCKKNVSMGGDKHEPPAPPIPSDRNVTAKCKNNDTLITADKLSRRDKKRPLGYGRASVKTDFSEKMTDPEARLEVEGVTKSESSTDGDGPRAQAAADDVIHRLMQDTTDEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPMARTARAAGGGSRYLSSRRSSEDSLEDGGSLRDLRNELKEYEDKFRKAMIANAQLDNDKTSLTYQLELFKDRIEELEEEHSQLKREHREKCREHDQMKRLCAKMKDDLAVTRAELEERDQLISEKGLVIVGEESINEEEQRNGDTSLNSIGTPKKALVSVENAQLLESAGEGSLDVRLAKFMKEKSELQDQISHLKLELEEERSKRKKSNSVGTLNGPASDQDLDELDIQREASKQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEVSEKAEEALKAEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415112;
- 90% Identity
- -
- 80% Identity
- -