Csis008703.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chalcis sispes
Gene Symbol
tfip11
Assembly
GCA_949987625.1
Location
OX465095.1:3513385-3516678[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-96 1.9e-92 311.0 21.1 1 275 385 651 385 651 0.98
2 2 0.0086 1.3e+02 3.3 0.0 244 272 665 693 656 708 0.84

Sequence Information

Coding Sequence
ATGTCAGACgaagaaatggaaaaatttcaaatttctgaTTATGATTtagataatgaatttaatattaatcgaCCTCGacgaaaattaacgaaaagacAACAAATGCTAGgtATTTGGgctagtgacagtgatgaagaagaTGTAAGGCCATCATTTAGTAGAGCACCAAAAAATTATAGTGCACCGGTCAATTTTGTAGCAGGAGGTATACAACAAGCAGGACAaccaaaggagaaaaaagaagatgacGACGATGAAGAAGATAATGATacaatgagaataaaaaatagttccagTGAATCAGAGGAAGATACATATAATCATACCAGAAAGtcagcattaaattttaatttaggcAATGACATTGCtggattaagaaaaaaaagaaatcctttAAATCCAGAACTTATGAAAACCGGTGTTGGTTCTTGGGAAGTTCATACTAAAGGAATCGGAGCAAAATTACTTCTTCAAATGGGTTTTGAACCTGGTAAAGGCTTAGGAAAGCAGTTACAAGGTATAAGTGCCCCTGTAGAAGCTCGTTTAAGAAGAGGAAGAGGGGCCATTGGTGCCTATGGTCCTGAAAAAACTCCAAAGCTTGCAGACTCTAAGCCaacaattgaaaatatagatataaaaaaaaatttgagtaaaattaaaacttcacaTTGGAGAAAAGTAGacaaaggagaaaagaaaaagataaattattcatatcgTACAGTAGATGAAGTATTAGAAGATGGAAGATCaaaaactaatagaaaaatGCCAATTATTAATACagatatatttaattgtaaagtaACAGATATGACAACTCCTGAACAAAGAGTATTTAGTGGTTATCATGCACTAGGCAAACGTCAAATAAAATCGGATGGAAATATATCTCCAACCGATAAGAaagcaaaagtaaatttttcattaccagAACTACAGCACAACTTAGATATGATTGTCGATATGTGCgaacaaaatataatacaaaatgatAGAAGAACAAAACATCTTAGTGATCGAGTGATATCTTTAGAAGCTGAAAAACAAACTTTAGCAAAAGTTGTTGATCAGCATGCTCAATTAATTGGTACATTAGAAAATGCTTTAgcaatgattaataaattactagACAGAAATATCGAAATGACATTGAAAGAGACTGCAGAAGCATTTAAAGTTTTACAAGAAAGACATTATGAAGAATATAAAACATATGAATTAGGAGACTTGGCATGCAGCTTTATCATTccaaaaattcaagaaaatctTGCCGATTGGAATCCACTTACACAGGCAAAGTTGCCATTAGCTTTATTTAAGGAATGGAAAGATATTTTAGAATATGGTAAAATGAATCAAACTAGATCTATGAGCCCTTATGACCAACTTGTTTGGAATGTATGGATGCCACCTGTTCGAATTGCTATACAaaattggGCTTGCAGGCAACCAGAATGTCTTATTGATCTACTTGAATATTGGTTGCCACTACTGCCTTCATggattttagataatatatTAGATATGATTATTCTTCCAAAACTAACTTACGAGGTAGAAGAATGGAATCCATTAACAGACACAGTACCAATTCATACATGGATTCATCCATGGTTACCTTTAATGAaaaataaaatggacACATTAATATATCCAATAATTAGGAGAAAATTAGGTTCTGCTCTTGGTGCTTGGCATCCATCAGATCGTTCGGCTAGATTAATGCTGCAACCTTGGTCACAAGTTTTTACAAAAGCTGATATGAATGCTTTCTTAGTTAAAAATATCTTACCAAAACTTCAAATTTCACTTtctgaattaattattaatccaCATCAACAACATTTAGATCAATGGAATTGGGTTTATGATTGGAAAGATTTAATTCCTGTTCAGACAATGGCTGCATTGTTGGATAAATTCTTCTTCCCAAAGTGGTTACAGGTATTAGGACTTTGGTTAAATCATTCACCAAATTATGAGCAGGTGACAAACTGGTATACAGGTTGGAAAGGAATGCTTAGCGACAAACTTCTTGCAGAACCTCTAATTAAAGagcatTTTAGAAAAGCCTTAGAAATGATGAACAGAGCAGTATCTATTCCACAAGGACTTCAACCAGGTTCGGTAGAACAAGTGTCATATTTAACTACACTTGAACGCAATCAAATGTCTCAAATTCCTCAAATTTCGCAAATTTCTCAACCAAGGATGGAAagaTTAGCAGAAGCTGTAAGAACGGCATCTCAAATTCCACAAGGTTTTAAAGATCTAGTTCAAAAGAAATGCGAAGAAAGAGGTATTTTATTTATGCCACTTCCAAATAGGTATCGTGAcgcaaaacaaatttataaagtgGGCAATGTTCAAGCATATATCGATAGtgatattttattcgtttgtcATAATGGAACAAATTGGTTGCCCACGAATTTGAACACATTACTAGATACAGCTGAAATTagttaa
Protein Sequence
MSDEEMEKFQISDYDLDNEFNINRPRRKLTKRQQMLGIWASDSDEEDVRPSFSRAPKNYSAPVNFVAGGIQQAGQPKEKKEDDDDEEDNDTMRIKNSSSESEEDTYNHTRKSALNFNLGNDIAGLRKKRNPLNPELMKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEARLRRGRGAIGAYGPEKTPKLADSKPTIENIDIKKNLSKIKTSHWRKVDKGEKKKINYSYRTVDEVLEDGRSKTNRKMPIINTDIFNCKVTDMTTPEQRVFSGYHALGKRQIKSDGNISPTDKKAKVNFSLPELQHNLDMIVDMCEQNIIQNDRRTKHLSDRVISLEAEKQTLAKVVDQHAQLIGTLENALAMINKLLDRNIEMTLKETAEAFKVLQERHYEEYKTYELGDLACSFIIPKIQENLADWNPLTQAKLPLALFKEWKDILEYGKMNQTRSMSPYDQLVWNVWMPPVRIAIQNWACRQPECLIDLLEYWLPLLPSWILDNILDMIILPKLTYEVEEWNPLTDTVPIHTWIHPWLPLMKNKMDTLIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFTKADMNAFLVKNILPKLQISLSELIINPHQQHLDQWNWVYDWKDLIPVQTMAALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLLAEPLIKEHFRKALEMMNRAVSIPQGLQPGSVEQVSYLTTLERNQMSQIPQISQISQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPLPNRYRDAKQIYKVGNVQAYIDSDILFVCHNGTNWLPTNLNTLLDTAEIS