Ttex030896.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus texanus
Gene Symbol
tfip11
Assembly
GCA_036873485.1
Location
JAYJLV010039665.1:1-3383[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.9e-99 3.6e-94 317.4 18.9 1 275 344 610 344 610 0.98
2 2 0.015 5.6e+02 1.9 0.0 244 272 624 652 615 667 0.62

Sequence Information

Coding Sequence
aTTTGGGCAAGTGACAGTGAGGAAGAAGATGCACGGCCATCGTTCAGTAGAGCTCCAAAAAATTATAGTGCTCCTGTGAACTTTGTAGCTGGTGGTATACAGCAAGCTGGACAACCaaaggagaaaaaggaaaaaagagaaagtgatgatgaagaagatgatgaaaatgataggataaaaaatagttctagtgaaTCAGAGGAAGAAGCTGCTAGCTTCGCACCAAAAACATCATTTAATATGCACCTAAGTAACGATATTGCCGGTCTTAGAAAAAAGAGAACTCCAATAAATTCAGAGCTTATGAAAACAGGAGTTGGTAGCTGGGAAGTTCATACTAAAGGTATTGGTGCAAAACTGCTTCTTCAGATGGGTTTTGAACCAGGCAAAGGTTTAGGTAAATCATTACAAGGTATCAGTGCACCAGTAGAAGCTAAACTACGTAAAGGAAGAGGTGCCATAGGTGCTTATGGTCCtgaaaaaatggcaaaaatccCAGAGCTTAAAGGAAAATCCGAAGAAGCAGAATcaaaaaaaggcaaaagcaGAGGTTCCCATTGGCGTAAAGGTGAAACAGCagataagaaaaagaatttccgCACTGTTGATGAAGTGTTGGAAGACGGTCGATTAAAAAGTAACAGAAAGGCTCTTATTATAAACACTGAAATAGCAAAATGTAAAGTTATTGATATGACTACACCTGAGCAACGGACATGCAGTGGTTACCATGTATTAGGTAATAGACATCAGCTACCAACTGGAGATGTATCATCaacagataaaaaaacaaagaatttttcattaccaGAATTAATGCACAATTTAGATATGATAGTAGACATGTGTGAACAGGACATTATACAACATGACAGAAGATCCAAATATCTTGGTGACCGAGTTGTCTCATTAGAACAAGAAAAACAGACTTTATCCAAAATTGTTGATCAACATGTCAGCTTAATAGGAACGCTTGAAAATGCATTAGCAATGATTAATAAGCTAGTAGATAGAAAAGAAGACATGTCACTGAAGGAAATAGCagaagcttttaaaaatttacaagaaagaCATTATGAAGAGTATAAGTCATATAACATGGGAGAACTGGCATGTAGCTTTGTTATTCCAAAGATGAAAGAATATCTAATTGATTGGAATCCATTAACTCAAGCAAACATGCCACTGACTGTATTCCAAGAATGGAAAGACATTCTCGAATATGGAAGATTGGATCATACTAGATCAATGAGTCCTTATGATCAACTCGTTTGGAATGCATGGATGCCATCTGTTCGTGGTGCAGTAGAAAACTGGGCATGCAGACAGCCAGAGCCCCTCATCGATCTACTTGAGACCTGGCTACCGTTACTCCCCACATGGATAATGGAAAACCTACTGGACCTTGTCATTCTACCAAAGCTAACTCTGGAAGTGGAAGAGTGGAACCCCCTCACAGACACAGTTCCCATCCACACCTGGATCCATCCATGGCTGCCACTGATGAAAAATCGCATGGACACCCAAATATACCCCATAATCAGACGAAAGCTGGGTTCTGCTCTAGGAGCTTGGCATCCATCCGATCGCTCAGCCAGGCTAATGCTCCAGCCATGGTCGCAGGTGTTCAATAAGGGCGACATGAATGCCTTCCTGGTTAAAAACATCTTACCCAAGCTCCAAATATGTCTGTCTGAGCTCATCATCAATCCGCATCAGCAGCACCTCGACCAGTGGAACTGGGTCTACGATTGGCGTGATCTAATACCCCAACACACGATGGCTTCTCTCCTCGACAAGTTCTTCTTCCCCAAGTGGCTGCAAGTGCTAGGCTTGTGGCTGAACCATTCGCCCAACTACGAGCAGGTGACCAACTGGTACACAGGTTGGAAGGGTATGCTCAGTGACAAACTCCTAATGGAACCGATGATCAAGGAGCACTTCAGGAAGGCCCTGGAGATGATGAACAGAGCTGTATCGATACCCCAGGGACTACAACCGGGATCCGTGGAACAGGTGTCCTATCTCACTACCTTAGAGAGGAGTCAACCGCCAATGACAAATATGACGCAGATATCACAGCCGAGAATGGAAAGACTGGCAGAAGCCGTGCGGACGGCGTCGCAAATGCCCCACGGTTTCAAGGACTTGGTGCAGAAAAAATGCGAGGAACGGGGTATTTTATTCATGCCGCTACCGAATCGCTATCGCGAGGCCAAGCAGATCTACAAAATCGGCAACGTACAGGCGTACATCGACAGCGACGTCCTATTCGTCACCCACAACAATACCACTTGGCTTCCGACAAACCTCAATACCCTTCTCGACACTGCCGACATGTAA
Protein Sequence
IWASDSEEEDARPSFSRAPKNYSAPVNFVAGGIQQAGQPKEKKEKRESDDEEDDENDRIKNSSSESEEEAASFAPKTSFNMHLSNDIAGLRKKRTPINSELMKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAKLRKGRGAIGAYGPEKMAKIPELKGKSEEAESKKGKSRGSHWRKGETADKKKNFRTVDEVLEDGRLKSNRKALIINTEIAKCKVIDMTTPEQRTCSGYHVLGNRHQLPTGDVSSTDKKTKNFSLPELMHNLDMIVDMCEQDIIQHDRRSKYLGDRVVSLEQEKQTLSKIVDQHVSLIGTLENALAMINKLVDRKEDMSLKEIAEAFKNLQERHYEEYKSYNMGELACSFVIPKMKEYLIDWNPLTQANMPLTVFQEWKDILEYGRLDHTRSMSPYDQLVWNAWMPSVRGAVENWACRQPEPLIDLLETWLPLLPTWIMENLLDLVILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMKNRMDTQIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFNKGDMNAFLVKNILPKLQICLSELIINPHQQHLDQWNWVYDWRDLIPQHTMASLLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLLMEPMIKEHFRKALEMMNRAVSIPQGLQPGSVEQVSYLTTLERSQPPMTNMTQISQPRMERLAEAVRTASQMPHGFKDLVQKKCEERGILFMPLPNRYREAKQIYKIGNVQAYIDSDVLFVTHNNTTWLPTNLNTLLDTADM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309504;
90% Identity
iTF_01467091;
80% Identity
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