Ttub000658.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- tfip11
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000001.1:9886082-9889387[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-99 6.7e-95 319.3 18.2 1 275 381 647 381 647 0.98 2 2 0.0089 2.4e+02 2.7 0.0 244 272 661 689 652 704 0.63
Sequence Information
- Coding Sequence
- ATGTCAGGCGAGGAAATggagaaatttcaaatttccgaTTATGAtttggaaaatgaatttaatatacatCGGCCTCGGcgaaaaatgtctaaaaaacaGCAAATGTTAGgcatttgGGCAAGTGACAGTGAGGAAGAAGATGCAAGGCCATCGTTCAGTAGAGCTCCAAAAAATTATAGTGCCCCTGTGAGCTTTGTGGCTGGTGGTATACAGCAAGCTGGAGAaccaaaagagaaaaaagagaaaagggaAAGTGATGATGAAGACGACGATGAAAATGATAGGATAAAAAATAGTTctagtgaATCAGAGGAAGAAGCGGCTAGCTTTGCACCAAAAACATCATTTAATATGCACCTAAATAATGATATTGCCGGTCTTAGAAAAAAGAGAGCTCCAATAAATTCAGAGCTTATGAAAACAGGAGTTGGTAGCTGGGAAGTTCATACTAAAGGTATTGGTGCAAAGCTGCTACTTCAGATGGGTTTTGAACCAGGCAAAGGTTTAGGTAAACAATTACAAGGTATCAGTGCACCAGTAGAAGCAAAACTACGTAGAGGAAGAGGTGCCATAGGTGCTTATGGTCCTGAAAAAGTTGCAAAACTCGCAGAGATCAAAGGAAAATCTGAAGAAGGAGAATCAAAAAAAGGTAAAAGCAGAGTTTCCCATTGGCGTAAGGGTGAAACAAccgacaagaaaaaaaatttccgcaCTGTTGATGAAGTGTTGGAAGATGGGCGATTAAAAGGTAACAGAAAGGCTCCTATCATAAACACAGAAATAgcaaaatgtaaagtaattgATATGACTACACCTGAGCAACGGACATGCAGTGGTTACCACGTGTTAGGTAATAGACATCAACAGCCAACTGGAGATGTATCGTCAACAGATAAAAAgacaaagaatttttcattaccaGAATTAATGCACAATTTAGATATGATAGTAGACATGTGTGAACAGGACATTATACAACATGACAGAAGATCCAAATATCTTAGTGACCGAGTTGTCTCattagaacaagaaaaacaGACTTTAGCCAAAATCGTTGATCAACATGTCAGCTTAATAGGAACCCTTGAAAATGCATTAGCAATGATTAATAAGCTAGTAGATAGAAAAGAGGACATGTCACTAAAAGAAATAGCagaagcttttaaaaatttacaagaaagACATTATGAAGAGTACAAGTCATATAACATGGGAGAACTGGCATGTAGCTTTGTTATTCCAAAGATCAAAGAATATCTTATTGATTGGAATCCATTAACTCAAGCAAACATGCCATTGACTATATTTAAAGAATGGAAAGATATTCTCGAATATGGAAGATTGGATCATACTAGATCAATGAGTCCATACGATCAACTCGTTTGGAATGCATGGATGCCATCTATTCGTGGCGCAGTAGAAAACTGGGCATGCAGACAGCCAGAGCCTCTCATTGATCTTCTTGAAACTTGGCTACCATTACTCCCCACATGGATAATGGAAAACCTACTGGACCTTGTCATTCTTCCAAAGCTAACTCTGGAAGTAGAAGAATGGAACCCTCTAACGGATACAGTTCCCATTCACACCTGGATTCATCCATGGTTACCACTCATGAAAAATCGCATGGACACTCAAATATACCCCATAATCAGAAGAAAGCTGGGTTCCGCTTTAGGAGCATGGCATCCATCCGATCGCTCAGCCAGGTTAATGCTCCAACCATGGGCGCAGGTGTTTGCTAAGGGCGACATGAATGCCTTCCTCGTTAAAAACATCCTACCCAAGCTCCAAATATGTCTGTCTGAGTTGATTATCAATCCGCACCAGCAACACCTCGACCAATGGAATTGGGTCTACGATTGGCGTGATCTTATACCGCAGCACACGATGGCTTCTCTTCTCGACAAGTTCTTCTTCCCCAAGTGGCTGCAGGTGCTTGGCTTGTGGCTGAACCACTCGCCTAATTACGAGCAGGTGACCAACTGGTACACAGGTTGGAAGGGTATGCTCAGTGACAAACTCCTAACGGAGCCGATGATCAAGGAGCATTTCAGGAAAGCTCTGGAGATGATGAACAGAGCCGTATCGGTACCACAGGGACTACAACCGGGCTCCGTCGAACAGGTGTCCTACCTTACCACTCTAGAGAGGAGTCAGCCGCCAATGACGAATATGACGCAGATATCACAACCAAGAATGGAAAGACTAGCAGAAGCAGTGCGGACGGCATCGCAGATGCCTCACGGTTTCAAGGACTTGGTGCAGAAGAAATGCGAGGAACGGGGCATTTTATTCATGCCGCTACCGAATCGCTACCGCGAGGCCAAGCAGATCTACAAAATTGGCAATGTACAGGCTTACATCGACAGCGACGTTCTATTCGTTACCCACAACGGTACCACCTGGCTCCCGACGAACCTCAATACTCTTCTCGACACTGCCGACATGTGA
- Protein Sequence
- MSGEEMEKFQISDYDLENEFNIHRPRRKMSKKQQMLGIWASDSEEEDARPSFSRAPKNYSAPVSFVAGGIQQAGEPKEKKEKRESDDEDDDENDRIKNSSSESEEEAASFAPKTSFNMHLNNDIAGLRKKRAPINSELMKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAKLRRGRGAIGAYGPEKVAKLAEIKGKSEEGESKKGKSRVSHWRKGETTDKKKNFRTVDEVLEDGRLKGNRKAPIINTEIAKCKVIDMTTPEQRTCSGYHVLGNRHQQPTGDVSSTDKKTKNFSLPELMHNLDMIVDMCEQDIIQHDRRSKYLSDRVVSLEQEKQTLAKIVDQHVSLIGTLENALAMINKLVDRKEDMSLKEIAEAFKNLQERHYEEYKSYNMGELACSFVIPKIKEYLIDWNPLTQANMPLTIFKEWKDILEYGRLDHTRSMSPYDQLVWNAWMPSIRGAVENWACRQPEPLIDLLETWLPLLPTWIMENLLDLVILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMKNRMDTQIYPIIRRKLGSALGAWHPSDRSARLMLQPWAQVFAKGDMNAFLVKNILPKLQICLSELIINPHQQHLDQWNWVYDWRDLIPQHTMASLLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLLTEPMIKEHFRKALEMMNRAVSVPQGLQPGSVEQVSYLTTLERSQPPMTNMTQISQPRMERLAEAVRTASQMPHGFKDLVQKKCEERGILFMPLPNRYREAKQIYKIGNVQAYIDSDVLFVTHNGTTWLPTNLNTLLDTADM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_01467091;
- 80% Identity
- -