Ppup002773.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pteromalus puparum
Gene Symbol
tfip11
Assembly
GCA_012977825.2
Location
Scaffold:4702315-4705483[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-96 2.4e-92 309.4 18.8 1 275 388 655 388 655 0.98
2 2 0.014 1.3e+02 2.0 0.1 244 272 669 697 660 700 0.84

Sequence Information

Coding Sequence
ATGTCGGACGAAGAAATGGAAAAATTCCAAATCTCAGATTATGATTTAGACAATGAGTTCAACATACATCGGCATCGGCGAAAAATGAGTAAAAAACAACAAATGCTGGGTGTATGGGCTAGCGATAGCGAAGAAGAAGTCGAAGCAGCACGGCCAACTTTTAATAGAGCACCAAAAAGTCGAGGACCTGTAAATTTTGTAGCAGGCGGTATTCAACAAGCTGGACAGCCAAAAGAGAAAAAGGAAGAAGTTGAGGATGAAGAAGACGACGATAATATGAGGATAAGAAATAGCTCAAGTGAATCAGACGAAGAAGCACCCAGAAGTCGAGTTCAAAATAAGCAAGCTCTTAATTTTAATTTGGGCAACAATGATATTGCTGGATTAAGGAAAAAAAGAACACCACTGAATTCAGAACTCATCAAATCTGGAGTGGGTAGTTGGGAAGTTCATACTAAAGGCATAGGAGCCAAACTACTTCTTCAGATGGGCTTTGAACCAGGCAAAGGTCTGGGTAAGTCTTTGCAAGGTATAACAGCTCCAGTTGAAGCTCGATTAAGAAAAGGAAGAGGTGCCATTGGAGCATATGGTCGGGAAAAAGTTCAAAAGCTTGCCGATATTAAAACAACAGTTGAGGAAATAGAAGCCAAGAAATCAGGAAAACCTAGAACCGCACAGTGGAGAAAAGATAAAAGTGATAAGAAGCCTTCGAATTATTCTTTTCGCAGTATAGATGAAGTCCTTGAAGATGGGCGTTTAAAATCCAATAAAAAAGGACCAACAATAAACACCGAAATCGTTAAATGTAAAGTAACTGATATGACTACTCCAGAACAGCGGACATTTAGTGGTTATCATAGTGCATTAGGGAAACGTCAGTTACTGCCAGATGAAGAGATACCTGAACCAGATAAAAAGTCAAAAGTTAATTTTGTATTGCCAGAATTACAACATAATTTAGACATGATAGTTGATTTATGTGAACAGAACATAATACAAAATGATCGAAGAACAAAGCATCTCAGCGACAGAGTGGTATCTCTCGAAGCAGAGAAGGTTACATTGGAAAAGGTAGTTGATCAACATGCTCAGTTGATTGGAACTTTAGAAAATGCCTTGGCTATGGTCAATAAATTATTAGATAGAAATAGTGAGATGACTTTGAAAGAGACAGCTGATGCATTTAAAATTATGCAAGAGAGGCATTACGAAGAATACAAAGCCTATGATTTGGGTGAATTGGCATGCAGTTTTATCGTTCCTAAATTTAAAGATCACCTTGCAACATGGAACCCTCTAATGCAACCAAAATTACCACTAGCATTATTTAAAGAATGGAAGGATATATTAGAATATGGTCGACTCAATCATCATACAAGGTCAATGAATCCATATGATCAACTTATATGGAACGCATGGATGCCCTCGGTGAGAGGTGCCATACAGAATTGGGCTTGCAGACAACCAGATAATCTTATTGATTTGTTAGAGCTCTGGATGCCATTACTTCCATCGTGGATCTTAGATAATCTCTTAGATATGCTGATTCTGCCAAAACTTACTCTTGATGTAGAACAGTGGAATCCAGTAACAGACACTGTTCCAATCCATACTTGGATTCATCCATGGTTACCTTTGATGAGACACAGAATGGACACACTGATATACCCCGTGATCAGAAGAAAACTCGGATCTGCTCTCGGTGCTTGGCACCCGTCAGACAACTCCGCCAGACAGATGCTGCAGCCATGGTCTCAAGTTTTTGCGAGAGGCGACATGGACGCTTTCCTTGTGAAAAATATTTTACCAAAGCTGCAGATCGCGCTTTCTGAATTAATAATAAATCCTCACCAGCAGCATCTGGATCAATGGGAGTGGGTTTATGACTGGAAAGATTTAATTCCTATTCATATAATGGCCTCATTATTGGATAAATTCTTCTTCCCCAAGTGGTTGCAAGTTTTGGGTTTGTGGCTAAATCACTCTCCAAACTATGAGCAAGTGACTAATTGGTACACGGGATGGAAAGGCATGCTAAGTGATAAATTACTTGCTGAACCGATGATTAAAGACCACTTCAGGAAAGCACTGGAAATGATGAACAGAGCAGTCACGGTATCTCAGGGACTTCAACCGGGTTCGGTAGAGCAGGTATCATATTTGATGACACTAGAGCGTAGTCAACCAGCGATACCCCAAATGTCCCAGCCGAGGATGGAGAGACTTGCCGAGGCTGTCAGAATTGCTTCGGAAATCCCGCAAGGATTCAAGGATCTCGTGCAGAAGAAGTGCGAAGAAAGGGGAATTCTCTTCATGCCACTCGCAAACAGATACCGCGAGGGCAAACAAATCTACAAAGTCGGCAACGTGCAGGCCTACATAGACAGTAACATCCTCTTCGTCTGCCATAACGGAACCACCTGGATACCAACGAATCTTAATACCATGTTAGACACCGCGGAAATGGGCTGA
Protein Sequence
MSDEEMEKFQISDYDLDNEFNIHRHRRKMSKKQQMLGVWASDSEEEVEAARPTFNRAPKSRGPVNFVAGGIQQAGQPKEKKEEVEDEEDDDNMRIRNSSSESDEEAPRSRVQNKQALNFNLGNNDIAGLRKKRTPLNSELIKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGITAPVEARLRKGRGAIGAYGREKVQKLADIKTTVEEIEAKKSGKPRTAQWRKDKSDKKPSNYSFRSIDEVLEDGRLKSNKKGPTINTEIVKCKVTDMTTPEQRTFSGYHSALGKRQLLPDEEIPEPDKKSKVNFVLPELQHNLDMIVDLCEQNIIQNDRRTKHLSDRVVSLEAEKVTLEKVVDQHAQLIGTLENALAMVNKLLDRNSEMTLKETADAFKIMQERHYEEYKAYDLGELACSFIVPKFKDHLATWNPLMQPKLPLALFKEWKDILEYGRLNHHTRSMNPYDQLIWNAWMPSVRGAIQNWACRQPDNLIDLLELWMPLLPSWILDNLLDMLILPKLTLDVEQWNPVTDTVPIHTWIHPWLPLMRHRMDTLIYPVIRRKLGSALGAWHPSDNSARQMLQPWSQVFARGDMDAFLVKNILPKLQIALSELIINPHQQHLDQWEWVYDWKDLIPIHIMASLLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLLAEPMIKDHFRKALEMMNRAVTVSQGLQPGSVEQVSYLMTLERSQPAIPQMSQPRMERLAEAVRIASEIPQGFKDLVQKKCEERGILFMPLANRYREGKQIYKVGNVQAYIDSNILFVCHNGTTWIPTNLNTMLDTAEMG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309504;
90% Identity
iTF_01190336;
80% Identity
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