Mdor015296.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- tfip11
- Assembly
- GCA_900490025.1
- Location
- UELU01060327.1:6012-10220[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-96 4.2e-92 309.4 18.3 1 275 384 651 384 651 0.98 2 2 0.014 2.2e+02 2.1 0.0 245 272 666 693 656 708 0.69
Sequence Information
- Coding Sequence
- ATGGCTGACGAAGAAATGGAAAAGTTCCAAATATCGGATTATgatttagaaaatgaatttaatatcaATCGACCTCGTCGGAAGTTGTCTAAAAAACAACAAATGCTGGgtATTTGGGCCAGCGATAGTGATGAAGAAGATTCTAGACCATCTTTCAGTAGAGCACCAAAAAACTATACTGCACCAGTTAGTTTTGTAGCGGGAGGAGTCCAACAGGCAGGTCAaccaaaaaaggaaaaaagtgatgaggatgaagaagaaaatgatacAATGAGGATAAAAGATAGTTCTAgtgAATCAGAAGAGGAAATATCCAGGAGTCGTGCAGCTAAGCCATCCTACAACTTTACATTAGGCAACGATATTGCTGGATTGAGGAAAAAAAGAACTCCATTAAATCCAGAACTTATGAAAACAGGTGTTGGTACCTGGGAATTACATACAAAGGGCATTGGGACAAAATTGCTTCTTCAAATGGGTTTTGAACCAGGTAAAGGATTGGGAAAGCAATTACAGGGGATAAGTGCTCCTGTAGAAGCGCGACTGCGAAAAGGAAGAGGTGCTATTGGTGCATATGGACCAGAAAAAGTTCCAAAGTTGGcagaaattaaaacaaaacCAGAAGACTCTGACTCAAAAAAGTCGGTCAAAAATAAGTCTTCAcattggaaaaaaattgacAAGGGAGAAAAGAAGCAATCAAATTATGCTTATCGCAGTGTAGATGAACTATTGGAAGATGGGAGATTGAAACCTAACAGAAAAGTACCGATAATAAATACTGACATAGTTAAATGTAAAGTTACTGATATGACAACACCTGAACAGCGAGTATTTAGTGGATATCATGCATTGGGCAAGCGTCAATTACTGCCAGATGAAAATTTTCCTACAACTAATAAAAAAACCAAAGTGAACTTTTCATTACCAGAATTGGAGCATAATTTGGACATGCTTGTAGATATGTGTgaacaaaatataattcaaaatgaTAGAAGAATAAAGCATCTCGGTGATAGAGTAATTTCTCTTGACGCTGAAAAAGAGACTTTAATAAAAGTTGTTGATCAGCATGCACAACTAATTGGAACATTAGAAAATGCTTTAGCTATGGttaataaattagtagataGAAATAGTGATATGAGTTTAAAAGAGATTTCAGAATCGTTTAAGATTTTACAAGAGAGGCACTATGAAGAATATAAAGCATACAATTTGGGAGATTTAGCTTGCAGTTTTATTATCCCGAAAATCAAAGAACATCTTACAAATTGGAATCCTCTTACGCATCCAAAGTTACCAGTAGCGTTATTTAAAGAATGGAAAGATATTTTAGAATTTGGTAAATTAAACCAGCAAACTAGAGCCATGAATCCGTATGACCAACTAGTTTGGAATGCATGGATGCCGACGGTTCGGATTGCCGTACAgaACTGGACCTGTAGACAACCAGAAAGTCTTATCGATTTACTTGAATATTGGCTACCACTGCTTCCTTCGTGGATTTTGGATAATTTATTGGACTTGATTATTCTTCCGAAGTTGTCATTTGAGGTAGAAGAATGGAACCCATTAACAGATACTGTTCCAATTCACACATGGATTCATCCATGGTTACCACTAATGAGAAATCGAATGGACACTTTAATATATCCAATAATTAGGAGAAAACTTGGTTCTGCTCTTGGTGCTTGGCATCCATCAGATCGTTCGGCAAGATTAATGTTACAACCATGGACACAAGTTTTCACAAGGGGTGATATGGACGcctttttagtaaaaaatattttaccaaaACTACAAATTACACTCTCAGAGATAATCATCAATCCACATCAACAACATTTGGATCAATGGAATTCCGTGTACGAGTGGAAAGATTTGATTCCGGTTCATACAATGGCTTCATTATTAGATAAATTTTTCTTCCCTAAGTGGTTACAAGTATTAGGATTATGGTTGACTCATTCACCTAATTATGAACAAGTAACAAGCTGGTACACAGGATGGAAGGGGATGCTTAGTGATAAGCTTCTTGCTGAGCCAATGATTAAAGAGCACTTTAGAAAAGCGCTGGAAATGATGAACAGGGCAGTTTCAATTCCTGTGGGGCTACAACCAGGTTCGGTCGAACAGGTTTCATATTTAACAACTCTGGAGCGTAGTCAGGCTACTCCAATCTCTCAAATTGCCCAACCAAGGATGGAGAGATTAGCAGAAGCCATGAGAACAGTAGCACAAATTCCTCAAGGTTTTAAGGATTTGGTGCAAAAGAAATGCGAAGAAAGAGGCATTCTATTCATGCCGCTTCCAAACAGATATCGCGAGgcaaaacaaatttataaagttGGCAATGTGCAAGCTTATATCGACAGTGACACTTTGTTTGTTTGTCATAACGGCACAACCTGGTCGCCAACCAACCTCAATACTCTACTAGACACAGCCGAAATTAGTTAA
- Protein Sequence
- MADEEMEKFQISDYDLENEFNINRPRRKLSKKQQMLGIWASDSDEEDSRPSFSRAPKNYTAPVSFVAGGVQQAGQPKKEKSDEDEEENDTMRIKDSSSESEEEISRSRAAKPSYNFTLGNDIAGLRKKRTPLNPELMKTGVGTWELHTKGIGTKLLLQMGFEPGKGLGKQLQGISAPVEARLRKGRGAIGAYGPEKVPKLAEIKTKPEDSDSKKSVKNKSSHWKKIDKGEKKQSNYAYRSVDELLEDGRLKPNRKVPIINTDIVKCKVTDMTTPEQRVFSGYHALGKRQLLPDENFPTTNKKTKVNFSLPELEHNLDMLVDMCEQNIIQNDRRIKHLGDRVISLDAEKETLIKVVDQHAQLIGTLENALAMVNKLVDRNSDMSLKEISESFKILQERHYEEYKAYNLGDLACSFIIPKIKEHLTNWNPLTHPKLPVALFKEWKDILEFGKLNQQTRAMNPYDQLVWNAWMPTVRIAVQNWTCRQPESLIDLLEYWLPLLPSWILDNLLDLIILPKLSFEVEEWNPLTDTVPIHTWIHPWLPLMRNRMDTLIYPIIRRKLGSALGAWHPSDRSARLMLQPWTQVFTRGDMDAFLVKNILPKLQITLSEIIINPHQQHLDQWNSVYEWKDLIPVHTMASLLDKFFFPKWLQVLGLWLTHSPNYEQVTSWYTGWKGMLSDKLLAEPMIKEHFRKALEMMNRAVSIPVGLQPGSVEQVSYLTTLERSQATPISQIAQPRMERLAEAMRTVAQIPQGFKDLVQKKCEERGILFMPLPNRYREAKQIYKVGNVQAYIDSDTLFVCHNGTTWSPTNLNTLLDTAEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_00969612;
- 80% Identity
- -