Tger023517.1
Basic Information
- Insect
- Torymus geranii
- Gene Symbol
- tfip11
- Assembly
- GCA_900474355.1
- Location
- UCWB01012591.1:1778-5562[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-95 4.1e-91 306.2 19.5 1 275 377 643 377 643 0.98 2 2 0.031 3.4e+02 1.5 0.0 244 271 657 684 648 700 0.67
Sequence Information
- Coding Sequence
- ATGGCGGACGAGGAAAtggaaaagtttgaaatttctgATTATGATTTGCAAAACGAATTCAATATACATCGGCCTCGacgaaaaatgtcgaaaaagcAGCAAATGTTAGGTATTTGGGCAAGCGACAGTGACGAAGAAGATGCACGGCCATCATTTAGTAGAGCTCCAAAAAATTATAGTGCTCCTGTGAGCTTTGTAGCTGGTGGTGTACAGCAAGCTGGTCAAccaaaggagaaaaaagaaagtgataatgaagaagaagaaaatgataggataaaaaatagttctagTGAATCAGAGGAAGAAGCTGCTAGCTTTGCACCAAAAACATCAATCAATTTGCATCTAAATAACGATATTGCCGGTCTTAGAAAAAAGAGAGCTCCAATAAATTCAGAGCTTATGAAGACAGGAGTTGGTAGTTGGGAAGTTCACACTAAAGGTATTGGTGCAAAGCTGCTCCTACAGATGGGTTTCGAACCAGGCAAAGGTTTAGGTAAAAAATTGCAAGGTATCAGTGCACCAGTAGAAGCAAAACTACGTAGAGGAAGAGGTGCCATAGGTGCTTATGGCcctgaaaaaaaagtgaaaatcccAGAGCTTAAAGTAAAATCTGAAGAATCAGAGTCAAAAAAAGGCAAAAGCAGAGTTTCACTTTGGCGGAAAGGTGATATGGTggataagaaaaagaattttcgcaCTGTTGATGAAGTATTGGAAGATGGACGATTAAAAAGTAACAGAAAGGCTCCTATCATAAACACTGAAATAGCAAAATGTAAAGTTATCGATATGACTACACCTGAGCAACGGACATGTAGTGGTTACCATGTGTTAGGTAATAGACATCAGCAGCCAAGTGGAGATGTATCGTCCACAGATAAAAAAACCAAGAATTTTTCGTTACCAGAATTAATGCACAATTTAGATATGATAGTAGACATGTGTGAACAGGACATAATACAACATGACAGAAGATCAAAGTATCTTGGTGACCGAGTTGTCTCATTAGAACAAGAGAAACAAACTTTAGCCAAAATTGTTGATCAACATGTCAACTTAATTGGAACACTTGAAAATGCATTAGCAATGATTAATAAGCTAGTAGATAGAAAAGAAGATATGTCGCTAAAGGAAATAGCAGAAGCTTTTAAAACTTTACAAGAAAGACATTATGACATGTACAAATCATATAACATGGGAGAACTGGCATGTAGCTTTGTTATTCCAAAGATAAAAGAAGAACTGGCTGATTGGAATCCATTAACGCAAGCAAACATGCCACTAACTCTATTCAAAGAATGGAAAGATATTCTCGAATACGGAAGATTGGATCATACTAGATCAATGAGTCCCTATGATCAACTTGTTTGGAATGCATGGATGCCATCAATTAGTGGTGCAGTACAAAACTGGGCATGCAGGCAGCCAGAGCCTCTTATTGATCTGCTCGAGACCTGGCTTCCATTACTCCCCACATGGATAATGGAAAACCTATTAGACCTTGTCATTCTTCCAAAGCTAACTCTAGATGTGGAAGAGTGGAACCCTCTCACGGATACTGTACCAATTCATACCTGGATACACCCATGGCTACCGTTGATGAAAAACCGCATGGACACCCAAATATACCCTATAATTAGACGAAAGCTGGCTTCCGCTCTGGGAGCTTGGCATCCATCCGATGGCTCGGCCAGGCTAATGCTCCAGCCATGGACGCAAGTCTTTGCCAGGAACGACATGGACGCctttattgttaaaaacattCTGCCCAAGCTTCAGCTATGTCTGTCCCAGATTATCATCAACCCGCACCAGCAGCACCTCGACCAATGGAACTGGGTCAATGAGTGGCGCGACATGATACCCCAGCACACGATGGCCTCACTTCTGGACAAGTTTTTCTTCCCAAGGTGGCTGCAGGTGTTGGCCTGTTGGCTGAACAACTCACCCAACTACGAGCAGGTGACCAACTGGTATACGGGCTGGAAGGGTATGCTCAACGACAAACTGCTAGCAGAGCCAATAATCAAGGAGCACTTCAGGAAGGCACTGGAGCTAATGCAAAAAGCCGTGTCGATAACACAGGGGCTACAACCCGGCTCGGTGGAACAGGTGTCCTATCTCACCACCCTGGAGAGAAGCCAACCGCCAATGACGAATATGACTCAGATGTCACAGCCGAGAATGGAAAGACTGGCAGAAGCGGTGCGAACGGCATCGCAGGTGCACCACGGCTTCAAGGACTTGGTGCAGAAGAAGTGCGAAAAGCGGGGTATTCTATTCATGCCGTTGGCGAATCGCTATCGCGAGTCCAAGCAAATCTACAAAATCGGCAATGTGCAAGCGTACATCGAGAGCGACATGCTATTTGTCACCCACAACGGCACCACCTGGTATCCGACAAATCTAAATACCTTGCTCGACACTGCCGACATGTGA
- Protein Sequence
- MADEEMEKFEISDYDLQNEFNIHRPRRKMSKKQQMLGIWASDSDEEDARPSFSRAPKNYSAPVSFVAGGVQQAGQPKEKKESDNEEEENDRIKNSSSESEEEAASFAPKTSINLHLNNDIAGLRKKRAPINSELMKTGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAKLRRGRGAIGAYGPEKKVKIPELKVKSEESESKKGKSRVSLWRKGDMVDKKKNFRTVDEVLEDGRLKSNRKAPIINTEIAKCKVIDMTTPEQRTCSGYHVLGNRHQQPSGDVSSTDKKTKNFSLPELMHNLDMIVDMCEQDIIQHDRRSKYLGDRVVSLEQEKQTLAKIVDQHVNLIGTLENALAMINKLVDRKEDMSLKEIAEAFKTLQERHYDMYKSYNMGELACSFVIPKIKEELADWNPLTQANMPLTLFKEWKDILEYGRLDHTRSMSPYDQLVWNAWMPSISGAVQNWACRQPEPLIDLLETWLPLLPTWIMENLLDLVILPKLTLDVEEWNPLTDTVPIHTWIHPWLPLMKNRMDTQIYPIIRRKLASALGAWHPSDGSARLMLQPWTQVFARNDMDAFIVKNILPKLQLCLSQIIINPHQQHLDQWNWVNEWRDMIPQHTMASLLDKFFFPRWLQVLACWLNNSPNYEQVTNWYTGWKGMLNDKLLAEPIIKEHFRKALELMQKAVSITQGLQPGSVEQVSYLTTLERSQPPMTNMTQMSQPRMERLAEAVRTASQVHHGFKDLVQKKCEKRGILFMPLANRYRESKQIYKIGNVQAYIESDMLFVTHNGTTWYPTNLNTLLDTADM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_01466210; iTF_01467975; iTF_01465186; iTF_01468854; iTF_01469675;
- 80% Identity
- -