Pnir051491.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- TFIP11
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010001114.1:9475-13228[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-96 7.8e-92 309.6 18.2 1 275 387 654 387 654 0.98 2 2 0.022 5e+02 2.0 0.0 157 191 666 699 659 712 0.54
Sequence Information
- Coding Sequence
- atgtcTGACGAAGAAATGGAAAAGTTCCAAATTTCGGATTAcgatttagaaaatgaatttaatataaatcgcTCTCGGCGAAAGTTGTCCAAGAAACAACAAATGCTggGTGTATGGGCCAGTGACAGTGAAGAAGAAGAAGTAAGACCGTCCTTTAGTAGAGCACCAAAGAACTATACTGCACCTGTTAGTTTTGTACCTGGAGGAATACAACAAGCAGGACaaccaaaagaaaaaaaagaagaagatgaggaagaagaagaagaagacgatgataatgcaagaataaaaaacagttcgagcGAATCAGAAGAAGAACTACCAAAATCTCGTACAGCTGAACcaactttcaatttttcattaggCAATGATATTGCTGGACTTCGAAAAAAACGAGTTCCTTTAAATCCAGAGCTTATGAAAACAGGTGTTGGTAATTGGGAAATTCACACAAAAGGAATCGGTGCAAAATTACTTCTTCAAATGGGTTTTGAACCAGGTAAAGGCTTGGGAAAACAATTACAAGGTATAAGTGCACCTGTGGAAGCACGTTTACGAAAAGGAAGAGGTGCTATTGGTGCTTACGGTCCAGAAAAAACTgcaaaagttttagaaattaagaCAAAGACTGAAGATACTGatataaaaaagacaaataaaggTAGAACTTCACAGTGGAGAAAACTCGACaaaactgaaaagaaaaaatcaagttATAATTATCGTAGTGTAGATGAAGTTCTCGAAGATGGAAGATTAAGAACTAACAGAAAAGCACCGTTAATAAATGCTGAAATTGCTAAGTGTAAAGTTACTGACATGACGACACCTGAGCAAAGAGTATTTAGTGGCTATCATGCATTAGGCAAACGTCACCTTCAACCGGTTGAAGACTTACCTCCGACGGacaaaaaaacaacaataaactTTTCATTGCCAGAATTACAGCATAATTTAGATATGCTTGTAGATATGTgtgaacaaaatataattcagaatGATAGAAGAACAAAGCATCTCTGTAATAGAGTAATTTCTCTTTTAGCTGAAAAACAAACGTTACTTCAAATTGTTGATCAGCATGCACAATTAATTGGAACGTTAGAAAATGCCTTAgctatgattaataaattattagatagaAACAATGATATGACTTTAAAAGAGACAGCAGAAGCATTTAAGATTTTGCAAGAAAGGCATTACGATGAATATAAAGCGTATGACTTAGGCGATTTAGCATGTAGTTTTATCATTCCTAAAATCAAAGATCATCTTGCGAATTGGAATCCACTGACGCAATCGAAGTTACCGTTAGTATTATTCAAAGAATGGAAGGATATTTTAGAATATGGTAAGTTAAATCAACATTCGCGATCAATGAATCCGTATGATCAACTTATTTGGAATGCCTGGATGCCATCCGTTCGAGGTGCTATACAAAGTTGGGTTTGCAGACAACCGGATAATCTTATTGATTTACTGGAATATTGGTTACCCCTACTTCCTCCTTGGATTTTAGATAATCTCTTAGACATGATTATTCTTCCTAAATTAACTTTTGAGGTAGAAGAATGGAATCCGTTAACAGATACTGTGCCAATCCATACGTGGATTCATCCATGGTTACCTTTGAtgaAGAATCGAATGGACACATTAATATATCCAATAATTCGAAGGAAACTTGGTTCTGCTCTCGGTGCATGGCATCCATCGGATCGTTCAGCCAGATTAATGTTACAGCCATGGTCACAAGTTTTTGCAAAAGGTGATATGGACGCCTTCCTAGTAAAAAATATCCTACCAAAACTACAGATTGCACTTTCCGAGTTAATTATCAATCCACATCAACAACATTTGGACCAGTGGAATTGGGTTTACGATTGGAAAGATTTGATCCCTGTTCACACAATGGCTGCATTGTTAGATAAATTCTTTTTCCCTAAATGGTTACAAGTTTTAGGACTCTGGTTAAATCATTCGCCAAACTACGAACAAGTAACAAATTGGTATACGGGTTGGAAAGGAATGCTAAACGAAAAACTTCTTGCAGAGCCAATAATCAAAGAACACTTCAGAAAAGCACTGGAGATGATGAACAGGGCAGTTTCAATACCGCAAGGACTTCAACCGGGTTCAGTGGAACAAGTTTCGTATTTAACAACTCTAGAACGTAGCCAATCGCAAATTTGTCAAATTTCACAAATTTCCCAACCAAGGATGGAAAGACTAGCGGAAGCCGTAAGGACGGCATCGCAAATTCCTCAAGGCTTTAAAGACTTAGTACAAAAAAAGTGCGAAGAGAGAGGTATTTTATTCATGCCTCTTGCAAACAGATATCGCGAGGGAAAACAAGTTTATAAGGTTGGAAATGTCCAAGCTTATATCGACAGTGATATACTATTTGTTTGCCATAATGGAACAACCTGGTTACCGACAAATCTTAATACTCTTTTAGATACGgccgaaattaattaa
- Protein Sequence
- MSDEEMEKFQISDYDLENEFNINRSRRKLSKKQQMLGVWASDSEEEEVRPSFSRAPKNYTAPVSFVPGGIQQAGQPKEKKEEDEEEEEEDDDNARIKNSSSESEEELPKSRTAEPTFNFSLGNDIAGLRKKRVPLNPELMKTGVGNWEIHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEARLRKGRGAIGAYGPEKTAKVLEIKTKTEDTDIKKTNKGRTSQWRKLDKTEKKKSSYNYRSVDEVLEDGRLRTNRKAPLINAEIAKCKVTDMTTPEQRVFSGYHALGKRHLQPVEDLPPTDKKTTINFSLPELQHNLDMLVDMCEQNIIQNDRRTKHLCNRVISLLAEKQTLLQIVDQHAQLIGTLENALAMINKLLDRNNDMTLKETAEAFKILQERHYDEYKAYDLGDLACSFIIPKIKDHLANWNPLTQSKLPLVLFKEWKDILEYGKLNQHSRSMNPYDQLIWNAWMPSVRGAIQSWVCRQPDNLIDLLEYWLPLLPPWILDNLLDMIILPKLTFEVEEWNPLTDTVPIHTWIHPWLPLMKNRMDTLIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFAKGDMDAFLVKNILPKLQIALSELIINPHQQHLDQWNWVYDWKDLIPVHTMAALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLNEKLLAEPIIKEHFRKALEMMNRAVSIPQGLQPGSVEQVSYLTTLERSQSQICQISQISQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPLANRYREGKQVYKVGNVQAYIDSDILFVCHNGTTWLPTNLNTLLDTAEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_00305638; iTF_00463989; iTF_01524027;
- 80% Identity
- -