Abak010876.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- tfip11
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000003.1:12736837-12739991[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-96 3e-92 308.9 16.8 1 275 387 654 387 654 0.98 2 2 0.034 2.6e+02 0.8 0.0 245 272 669 696 659 711 0.59
Sequence Information
- Coding Sequence
- ATGTCGGACGAGGAAATGGAAAAATTCGAAATTTCGGATTATGATTTGGACAATGAATTCAACATACACCGAAATCGTCGGAAAATGAGTAAAAAGCAGCAAATGCTGGGCGTATGGGCTAGCGATAGCGACGAAGAAGTAGAAAGACGTCCATCGTTTAACAGACCTCCAAAAAGTCGAGGACCTGTAAATTTCGTTGCAGGTGGTATTCAGCAAGCTGGACAGCCGAAAGAAAAAAAGGAAGAAGTCGAAGAGGAAGATGACGAGGATAATATGAGGATAAGAAATAGCTCTAGCGAATCGGAAGATGAAGCACCTAGAAGTCGAGCACAAAACAAGCAATCGATGCACTTTGATTTGGGCAATAACGAAATTGCTGGATTGAGAAAAAAGAAATCAGCTTTAAAACCTGATCTTATAAAATCAGGAATGGGTAGTTGGGAAGTTCACACCAAAGGTATCGGAGCAAAGTTGCTTCTTCAAATGGGTTTCGAACCAGGCAAAGGTTTGGGTAAGTCTTTGCAAGGTATAACTGCTCCTGTTGAGGCTCGATTAAGAAAAGGAAGAGGAGCTATTGGAGCATATGGTCATGAAAAAGTTCAAAAACTTGCCGACTCTAAACCAAAAGTGGAAGATACAGATGGCAAAAAATCTGGTAAAACTAGAACTTCACAGTGGAGGAAAGACAAGAGTGAGAAAAAATCATCAAATTATTCTTATCGGAGTATAGATGAAGTACTTGAAGATGGAAGGTTGAAAACTAATAAAAAAGTACCAACCATAAATACTGAAATAGTCAAATGCAAAGTAACCGATATGACTACACCAGAACAACGAACATTTAGTGGTTACCATAGTGCTTTGGGCAAACGTCAATTACTACCGGATGAGGAAATATCTGAACCAGATAAAAAATCCGAAGTTAATTTTGCTTTACCAGAATTACAGCATAATTTAGACATGATAGTTGATATGTGCGAACAAAATATTATTCAAAACGACAGAAGGACCAAGCATCTTAGCGACAGAGTGATATCTCTCGAAGCAGAAAAAGATACTTTAGTAAAGATAGTAGATCAGCATGCCCAGTTAATTGGAACTTTGGAGAACGCTTTGGCTATGGTTAACAAACTTTTAGATAGAAATAGTGATATGACGTTAAAAGAAACTGCTGATGCTTTCAAAATCATGCAAGAAAGGCATTACGATGAATACAAGGCCTACGATTTAGGTGAATTAGCCTGTAGCTTTATCGTTCCTAAATTCAAAGATTACATTGCAACGTGGAATCCTCTTGCACAACCAAAACTACCACTTTCATTATTTAAAGAATGGAAAGATATATTAGAATATGGTCGACTCAATCTGCACTCAAGATCGATGAATCCGTACGATCAACTGATATGGAACGCATGGATGCCATCAGTTAGATGTGCCATACAGAACTGGGCTTGCAGACAGCCGGATAATCTTATTGATTTATTGGAGATCTGGATGCCATTCCTACCATCTTGGATCTTAGACAATCTTTTGGATATGATTATCCTTCCAAAACTTACTTTAGAAGTAGAGCAGTGGAATCCGGTTACAGACACGGTTCCAATTCACACGTGGATTCATCCATGGTTACCCTTAATGAGAAACCGAATGGACACTTTAATATATCCTGTGATCAGAAGAAAACTTGGATCAGCTCTCGGTGCTTGGCATCCGTCAGACGGTTCCGCTAGACAAATGCTGCAGCCATGGTCGCAAGTTTTCGCACGAGGTGACATGGACGCTTTCCTCGTGAAAAACATTCTGCCAAAACTTCAAATCGCGCTTTCTGAGCTGATCATTAATCCACATCAACAACATTTGGATCAATGGGAATGGGTATACGATTGGAAAGATTTGATTCCAATTCACATAATGGCCTCGTTGTTGGATAAGTTCTTCTTTCCCAAGTGGCTGCAGGTTTTGGGTTTATGGTTAAATCACTCTCCCAATTACGAACAAGTGACAAATTGGTATTCAGGATGGAAGGGAATGCTAAGTGAGAATTTACTCGCTGAACCCATAATAAAAGAGCACTTTAGGAAAGCACTGGAAATGATGAACAGAGCTGTCACGGTATCGCAGGGTCTTCAACCGGGTTCGGTAGAACAAGTGTCTTATTTGATGACACTAGAGCGTAGTCAACCGCAGATGCCTCAAATATCTCAACCAAGGATGGAAAGGCTCGCAGAGGCTGTTAGAACAGCATCGGAAATTCCACAAGGCTTCAAAGATCTCGTACAAAGAAAATGCGAGGAACGAGGCATTCTCTTTATGCCGCTCGCCAATAGATATCGAGAAGGCAAACAGATCTACAAAGTTGGCAATGTACAAGCTTACATCGATAGCAATATCCTCTTCGTCTGTCATAATGGCGCTACTTGGGTACCAACAAATCTTAATACCCTGTTAGATACCGCGGAAATGAGTTGA
- Protein Sequence
- MSDEEMEKFEISDYDLDNEFNIHRNRRKMSKKQQMLGVWASDSDEEVERRPSFNRPPKSRGPVNFVAGGIQQAGQPKEKKEEVEEEDDEDNMRIRNSSSESEDEAPRSRAQNKQSMHFDLGNNEIAGLRKKKSALKPDLIKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGITAPVEARLRKGRGAIGAYGHEKVQKLADSKPKVEDTDGKKSGKTRTSQWRKDKSEKKSSNYSYRSIDEVLEDGRLKTNKKVPTINTEIVKCKVTDMTTPEQRTFSGYHSALGKRQLLPDEEISEPDKKSEVNFALPELQHNLDMIVDMCEQNIIQNDRRTKHLSDRVISLEAEKDTLVKIVDQHAQLIGTLENALAMVNKLLDRNSDMTLKETADAFKIMQERHYDEYKAYDLGELACSFIVPKFKDYIATWNPLAQPKLPLSLFKEWKDILEYGRLNLHSRSMNPYDQLIWNAWMPSVRCAIQNWACRQPDNLIDLLEIWMPFLPSWILDNLLDMIILPKLTLEVEQWNPVTDTVPIHTWIHPWLPLMRNRMDTLIYPVIRRKLGSALGAWHPSDGSARQMLQPWSQVFARGDMDAFLVKNILPKLQIALSELIINPHQQHLDQWEWVYDWKDLIPIHIMASLLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYSGWKGMLSENLLAEPIIKEHFRKALEMMNRAVTVSQGLQPGSVEQVSYLMTLERSQPQMPQISQPRMERLAEAVRTASEIPQGFKDLVQRKCEERGILFMPLANRYREGKQIYKVGNVQAYIDSNILFVCHNGATWVPTNLNTLLDTAEMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_01190336;
- 80% Identity
- -