Sagr015490.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- TFIP11
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000011.1:517910-520885[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-96 1.3e-92 310.7 16.9 1 275 391 658 391 658 0.98 2 2 0.017 2e+02 1.8 0.0 244 272 672 700 663 703 0.85
Sequence Information
- Coding Sequence
- ATGTCTGACGAAGAAATGGAAAAGTTCCAAATTTCGGATTACGATTTGGAGAATGAATTTAATATACATCGTTCTCGACGAAAAATGTCTAAAAAACAACAAATGCTAGGTATCTGGGCTAGTGATAGCGAAGAAGAAGATGCTAGACCATCTTTTAGCAGAGCTCCAAAAAATTATAGTGCGCCTGTTAGTTTTGTAGCAGGAGGTATTCAACAAGCAGGTCAACCTAAGGAGAAAGAAGAAAAAGATTCTGGTGATGAAGAAGATGATGACGAAAGATTAAGAGTCTTAGATAGTAGTTCTAGTGAATCAGAAGAAGAAATGAAAAAGAATTTAAGTTCAAGTACAGTATTTCCTTTCAATATAAATAATGACATTGCTGGACTACGGAAGAAAAAAGCAGCTCGTGTTAATCCAGAATTGATAAAGAGTGGTGTAGGTAGTTGGGAAGTTCACACAAAAGGTATAGGTGCAAAATTATTACTTCAAATGGGCTTTGAACCTGGTAAAGGCTTAGGAAAATCATTGCAAGGAATAAGTGCACCAGTAGAAGCTAAACTACGAAAAGGAAGAGGTGCTATTGGTGCTTATGGTCCTGAAAAAACTCCTAAATTAGCAGATGTTAAACAGAAAACTGAAGATGAAGATCAAAAAGGGTCAAAAAAAAGTAAAGTATCGCATTGGAGAAAAAATGATAAAGGAGATAAATCTGAAAAAAGAACAAATTACAATTATCGTACTGTAGATCAAGTAATAGAAGATGGAAGATTAAGAAATAATAAAAAAGTACCAATAATAAACACTGAAATTGTTAAATGTAAGGTAACAGATATGACTACACCCGAACAGCGAGTTTTCAGCAGTTACCATGCTTTAGGAAAGCGACAAATACAACCCGATGATAATTTACCTTCACCAGATAAGAAAATGAAAGTAAACTTTTCATTACCAGAATTACAACATAATTTAGACATGCTTTTAGATTTATGTGAGCAAAATATAATTCAAAATGATAGAAGAACAAAACATCTTGGTGACAGAGTGATTTCACTTGAAGCAGAAAAAGAAACTTTAATTGAAGTTGTTGATAAACATGCACAATTAATTGGTACTTTAGAAAATGCTTTAGCAATGATCAATAAATTGTTAGACAGAAATAGTGAAATGACTTTGAAAGAGACTGCTGAATCGTTCAAAATATTGCAAGAGCGGTACTATGAAGAATACAAAATGTATGAATTAGGGGATTTAGCTTGCAGTTTTATCATACCTAAATTTAAAGAACATCTTGCAAATTGGAATCCTTTCCAGTTTCCAAAATTGCCATTAGCATTATTTAAAGAGTGGAAAGATATATTAGAATATGGTAAACTAAATCATCAAACAAGATCTATGAATCCATATGATCAATTAGTTTGGCATGCATGGATGCCACCTGTCCGAGGAGCTATAAACAACTGGGCTTGTAGACAACCGGATAATCTTATTGATTTGCTTGAATATTGGCTGCCAATGCTTCCTTCCTGGATTTTTGAAAATCTTTTAGATTTAATTATTCTTCCAAAATTAACTCTGGAAGTTGAAGTGTGGAACCCTCTCACGGACACTGTTCCCATTCACACATGGATTCATCCATGGTTACCTCTAATGAAGAATCGTATGGATACTTTAATATATCCAATAATTCGAAGAAAACTTGGTTCTGCTCTTGGAGCCTGGCATCCATCTGATCGTTCAGCTAGATTAATGTTACAGCCCTGGTCACAAGTCTTTACAAGAGGGGATATGGATTCTTTCTTAGTAAAAAATATTATACCAAAATTACAAATAGCCCTTTCAGAATTAATTATCAATCCACATCAACAACATTTAGACCATTGGAATTGGGTTTATGAATGGAGAGATTTACTTCCTGTTCATACAATGGCTGGATTATTAGACAAATTCTTCTTTCCTAAATGGTTACAAGTTTTAGGACTCTGGTTAAATCATTCACCAAATTATGAACAAGTAACAAATTGGTACACTGGATGGAAAGGGATGCTTAGTGATAAATTGCTAGCAGAACCAGTAATCAAAGATTATTTTAGGAAAGCATTAGAAATGATGAATAGGGCTGTTTCTATACCTCAAGGTCTTCAACCTGGTTCAGTTGAACAAGTGTCGTATTTAACAGTCATGGAGCGTAATCAATCACAGGTGCCTTCAATACCTCCAATTTCTCAACCCAGAATGGACAGGTTAGCAGAAGCGGTTAGAACAGCATCACAAGTACCTCAAGGCTTTAAAGATTTGGTACAGAAAAAGTGTGAGGAAAGAGGCATTTTATTTATACCTCTTGCTAATCGGTACCGCGAAGGAAAACAGATTTTCAAAATTGGCAATGTTCAAGCTTATATTGATAGTGATATTGTATTTGTGTGTCATAATGGAACGACATGGATACCAACAAATCTTAATACGTTGCTAGATACAGCAGAAATGACTTAA
- Protein Sequence
- MSDEEMEKFQISDYDLENEFNIHRSRRKMSKKQQMLGIWASDSEEEDARPSFSRAPKNYSAPVSFVAGGIQQAGQPKEKEEKDSGDEEDDDERLRVLDSSSSESEEEMKKNLSSSTVFPFNINNDIAGLRKKKAARVNPELIKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKSLQGISAPVEAKLRKGRGAIGAYGPEKTPKLADVKQKTEDEDQKGSKKSKVSHWRKNDKGDKSEKRTNYNYRTVDQVIEDGRLRNNKKVPIINTEIVKCKVTDMTTPEQRVFSSYHALGKRQIQPDDNLPSPDKKMKVNFSLPELQHNLDMLLDLCEQNIIQNDRRTKHLGDRVISLEAEKETLIEVVDKHAQLIGTLENALAMINKLLDRNSEMTLKETAESFKILQERYYEEYKMYELGDLACSFIIPKFKEHLANWNPFQFPKLPLALFKEWKDILEYGKLNHQTRSMNPYDQLVWHAWMPPVRGAINNWACRQPDNLIDLLEYWLPMLPSWIFENLLDLIILPKLTLEVEVWNPLTDTVPIHTWIHPWLPLMKNRMDTLIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFTRGDMDSFLVKNIIPKLQIALSELIINPHQQHLDHWNWVYEWRDLLPVHTMAGLLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSDKLLAEPVIKDYFRKALEMMNRAVSIPQGLQPGSVEQVSYLTVMERNQSQVPSIPPISQPRMDRLAEAVRTASQVPQGFKDLVQKKCEERGILFIPLANRYREGKQIFKIGNVQAYIDSDIVFVCHNGTTWIPTNLNTLLDTAEMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- -
- 80% Identity
- -