Wpum010870.1
Basic Information
- Insect
- Wiebesia pumilae
- Gene Symbol
- TFIP11
- Assembly
- GCA_018907045.1
- Location
- JACCHZ010000138.1:9515499-9519048[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-96 7.9e-92 309.2 20.5 1 275 386 653 386 653 0.98 2 2 0.013 3.2e+02 2.2 0.0 244 272 667 695 658 710 0.75
Sequence Information
- Coding Sequence
- ATGTCTGACGAAGAAATGGAAAAATTTCAAATCTCGGATTACGATTTAGAAAATGAATTTAATATAAATCGTTCTCGACGAAAATTGACCAAAAAACAACAAATGTTAGGTGTATGGGCTAGTGACAGTGAAGAAGAGATAGTAAGACCATCGTTTAGCAAAGCACCAAAAAACTATACGGCGCCTGTTAGTTTTGTACCTGGAGGAATTCAGCAAGCGGGACAACCAAAAGAAAAAAAAGAAATTGAGGAAGAAGAGGAAGAAGATGATGATTCTTTAAGAATAAAAAACAGTTCAAGTGAATCAGAAGAAGAAATACCAAAAAGTCGTACATCTCAACCAGGGTACAATTTCACATTAGGCAATGATATTGCTGGATTACGGAAAAAACGAGCCCCTCTCAATCCAGAACTTATGAAAACAGGCGTTGGTAATTGGGAAGTTCACACAAAGGGAATCGGGGCAAAATTACTTCTTCAAATGGGTTTCGAACCTGGTAAAGGTTTGGGAAAACAATTACAAGGTATAAGTGCACCTGTAGAAGCTCGCTTACGAAAAGGAAGAGGTGCTATTGGTGCTTATGGCCCAGAAAAAACACCAAAAGTTGCTGATATTAAAATAAAAACTGAAGATACTGATACAAAAAAGACAAGTAGAGGTAGAACTTCACAATGGAGAAAACTTGATAAAAGTGAAAAGAAAAAATCAAATTATGTTTATCGCAGTGTGGATGAAGTTCTTGAAGATGGAAGATTAAGAAATAATAGAAAAGCACCTATAATAAATGCAGAAATTGCTAAATGTAAGGTTACTGATATGACAACTCCTGAACAACGAGTATTTAGTGGTTATCATGCATTAGGTAAACGTCATCTACAACCAGTGGAAGATTTACCTACAACAGATAAAAAAACAACGGTAAACTTTTCATTGCCAGAATTGCAACATAATTTAGACATGCTTGTAGATATGTGCGAACAAAATATAATACAGAATGATAGAAGATCAAAGCATCTCTGTAATAGAGTAGTTTCTCTTTTAGCTGAAAAGCAGACGTTACTTCAAATTGTTGATCAGCATGCCCAATTGATTGGAACACTAGAAAATGCTTTAGCTATGATTAATAAATTATTAGATAGAAATAATGATATGACTTTAAAAGAGACAGCAGAAGCTTTTAAAACTTTGCAAGAAAGGCATTATGATGAATACAAAGCATACGAATTAGGCGATTTGGCGTGTAGTTTTATCATTCCTAAAATCAAAGAACATCTCGCAAACTGGAATCCGTTAACGCAATCGAAGTTACCATTAGTGCTATTCAAAGAATGGAAAGATATTTTAGAATACGGTAAATTAAATCAACATACTCGATCTATGAATCCATATGATCAGCTTGTTTGGAATGCATGGATGCCATCTGTTCGAGGTGCTGTACAGAGTTGGATTTGTAGGCAACCTGAGAATCTTATTGATTTACTTGATTACTGGTTACCATTACTTCCGTCCTGGATTTTAGATAATCTTTTAGACATGGTGATTCTTCCTAAATTAACTTTGGAAGTAGAAGAGTGGAATCCATTAACAGACACTGTTCCAATTCACACGTGGATTCACCCATGGTTACCTTTAATGAAGAATCGAATGGACACGTTAATATATCCAATAATTAGGAGAAAACTTGGTTCTGCTCTTGGTGCATGGCATCCATCGGATCGTTCAGCTAGATTAATGTTACAGCCATGGTCACAAGTTTTTGCAAAACTCGATATGGATGCCTTTCTAGTAAAAAATATCCTACCAAAGCTACAGATTGCACTGTCTGAGTTAATTATTAACCCTCATCAACAACATTTGGATCAATGGAATTGGGTTTACGATTGGAAAGATTTGATCCCTGTTCATACAATGGTTGCATTATTAGATAAATTCTTTTTTCCTAAATGGTTACAAGTTCTAGGACTTTGGTTAAATCATTCGCCAAATTATGAACAAGTAACAAATTGGTATACAGGTTGGAAAGGAATGCTCAGTGAGAAACTTCTTGCCGAACCAATAATCAAAGAATACTTCAGGAAAGCATTGGAAATGATGAACAGAGCAGTTTCAATACCACAAGGGCTTCAACCAGGTTCAGTGGAGCAGGTCTCATATTTAACATCTTTAGAACGCAACCAGTCACAAATTTCTCAAATTTCTCAAATTTCTCAACCAAGAATGGAAAGACTAGCAGAAGCTGTAAGGACAGCATCGCAAATTCCTCAAGGTTTTAAAGACTTAGTACAGAAGAAATGTGAAGAAAGAGGTATTTTATTTATGCCACTTGCAAATAGGTATCGTGAAGGAAAACAAGTTTATAAGGTTGGCAACGTTCAAGCTTATATCGATAGTGATATATTATTTGTTTGTCATAATGGGACAACCTGGTTACCAACAAATCTTAATACACTTTTAGACACGGCCGAAATTAATTAA
- Protein Sequence
- MSDEEMEKFQISDYDLENEFNINRSRRKLTKKQQMLGVWASDSEEEIVRPSFSKAPKNYTAPVSFVPGGIQQAGQPKEKKEIEEEEEEDDDSLRIKNSSSESEEEIPKSRTSQPGYNFTLGNDIAGLRKKRAPLNPELMKTGVGNWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEARLRKGRGAIGAYGPEKTPKVADIKIKTEDTDTKKTSRGRTSQWRKLDKSEKKKSNYVYRSVDEVLEDGRLRNNRKAPIINAEIAKCKVTDMTTPEQRVFSGYHALGKRHLQPVEDLPTTDKKTTVNFSLPELQHNLDMLVDMCEQNIIQNDRRSKHLCNRVVSLLAEKQTLLQIVDQHAQLIGTLENALAMINKLLDRNNDMTLKETAEAFKTLQERHYDEYKAYELGDLACSFIIPKIKEHLANWNPLTQSKLPLVLFKEWKDILEYGKLNQHTRSMNPYDQLVWNAWMPSVRGAVQSWICRQPENLIDLLDYWLPLLPSWILDNLLDMVILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMKNRMDTLIYPIIRRKLGSALGAWHPSDRSARLMLQPWSQVFAKLDMDAFLVKNILPKLQIALSELIINPHQQHLDQWNWVYDWKDLIPVHTMVALLDKFFFPKWLQVLGLWLNHSPNYEQVTNWYTGWKGMLSEKLLAEPIIKEYFRKALEMMNRAVSIPQGLQPGSVEQVSYLTSLERNQSQISQISQISQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPLANRYREGKQVYKVGNVQAYIDSDILFVCHNGTTWLPTNLNTLLDTAEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309504;
- 90% Identity
- iTF_01219090;
- 80% Identity
- -