Bcul006618.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus cullumanus
Gene Symbol
ZNF236
Assembly
GCA_014737535.1
Location
JACXIX010000011.1:1947760-1957548[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0021 0.2 12.3 2.1 2 23 176 197 175 197 0.96
2 23 9.3e-05 0.0087 16.5 1.1 1 23 203 225 203 225 0.98
3 23 2.8e-06 0.00026 21.3 0.4 2 23 231 252 231 252 0.97
4 23 0.0073 0.69 10.5 0.3 3 23 260 280 258 280 0.96
5 23 6e-05 0.0056 17.1 0.9 2 23 291 312 291 312 0.98
6 23 6.6e-07 6.2e-05 23.3 1.1 1 23 333 355 333 355 0.99
7 23 2.6e-06 0.00024 21.4 0.8 1 20 361 380 361 383 0.95
8 23 2.5e-05 0.0023 18.3 0.7 1 23 389 412 389 412 0.95
9 23 0.0023 0.22 12.1 2.2 3 23 423 444 421 444 0.97
10 23 1.7e-06 0.00016 22.0 2.1 1 23 567 589 567 589 0.98
11 23 0.00028 0.026 15.0 3.3 1 23 595 617 595 617 0.99
12 23 0.024 2.3 8.9 1.9 1 23 623 645 623 645 0.97
13 23 0.0024 0.23 12.0 6.7 1 23 736 758 736 758 0.98
14 23 3e-05 0.0028 18.1 5.1 1 23 764 786 764 786 0.99
15 23 0.00023 0.022 15.3 1.0 3 23 794 814 792 814 0.97
16 23 0.00036 0.034 14.7 7.6 1 23 820 842 820 842 0.98
17 23 2.1 2e+02 2.8 1.3 2 23 1240 1261 1239 1261 0.94
18 23 0.00062 0.058 13.9 1.3 1 23 1267 1289 1267 1289 0.98
19 23 0.0062 0.59 10.8 1.6 1 23 1295 1317 1295 1317 0.98
20 23 0.00034 0.032 14.7 2.5 1 23 1401 1423 1401 1423 0.98
21 23 8e-06 0.00075 19.9 0.4 2 23 1648 1669 1647 1669 0.97
22 23 1.2e-05 0.0011 19.3 4.5 1 23 1675 1697 1675 1697 0.98
23 23 2.4e-06 0.00022 21.5 1.1 1 23 1703 1726 1703 1726 0.97

Sequence Information

Coding Sequence
ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCGCATGTCGATACAATACCTATAAATCTCGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTCGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGCATCACCACTAGTAGATGTAAAAAATTTTAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTCGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAGCATTGATCAAATAAAGTTACAATCATGCAGAGAATTAACATGCAAGGAAACAGTTATACAAGAATATCAGTCTCTTTCTTTGAATGATTCAGTAGCTAGTGAAAAGGATGGAAAAATTTGTAAACAGAAGCCAATTAATACATCTGTGAAAAAAAATAGCCCTGGAAGACCCAAGAAAAACAAAGCAATTTCTTTGCAAGATACAGATAGTTTAACATGCGATATTTGCCACCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACGCATAATACAGGTGAACCGAAATGTCCAGAATGTGGGAAAAAATTTGCGAGAATGGCTAGCTTAAAGTCTCATATGTTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAGACTCAATTAGATGCACATTTAAAGCTACATGGGGAAAAGTGGACGATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTATATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGGGGGACAAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCTTTTCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTCAAATGTACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATACGTGGCAACACAATGGCATTCGACCTCATGCTTGTGAATTTTGCAACGCCAAGTTTAGTCAGAAAGGTAATTTGAATGCTCACATAATGAGAGTTCACAATGTCCCAGACGGAGAACCTATATACGGATGTAATTATTGTTCGTGCGTGTTTAAAAAACTGGGCAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACCATTAATGACAATACTCATTCGAGTAATACCGTGGAGTCTGATATACGTGCAACAGTTGATAACGTTATAACACAACTGGCATCTTTAGAATCCGACATTCATCAAACTACAGAACCGGCGAATTTCGAACCGCGTTTATTAACGGAAAACGTAACGAAAAAGGATATCTTACAACAAGCATTGAAAAACAGCGGTCTTCCTAGTAAAAATAAAATTGCTTCTGAAGAGATAAAGAAGTTTGGAGCTCGTGTTAATTTTGTAACATTGTTGGATCGAGCGCCTGATGGTGATACAAGAAAATATTTGACAATAAAACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATCCGTCATTTGCGTGTTCACACGCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGCGGTTCCTGCGAGAAAGCATTCGTGTGCCATAGTAGTTTAATTGCACATACCAGATCGCATGCAAAGTCCGATAATTGTTCAAATAAAACCACTGACAATGATAAGGATCCCGACCCGTATGCGGTAATTGATGCTGACATTTATCCTACTGGTCAATCGAAGAATCAAATAAAGGGTAAATTAAAATTATCACCGGAAGCAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGATACAGGAAACAAAATTTCCGTGGTATCTTCGGGGAAGGAAAGACGTGCTTATGATACATCTACTGATCAGGCCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAGATCAGTCACTTGAAGCAACACCATCGCCGCCACACCGGAGAACGTCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAGGATTCGAGGCCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGGCCGTTCATGTGCCCTTATTGTCACAAGACTTTCAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTGGCACAACGGCAATTGGAGCAACAGAAAATCAGAATACAGGAACAAGCTTCAGACAAGTCAAATATGAAGGAAAATTTTAAACAAGAAGCGGCTCTTGAATCGTCTTCCTCCACTTCTGCCTCTATCGCTACGATTAATTCCACTATTACCAGCAACATCTCCGTCGCTACCACTGCCACTACCAGCACCACCCCTACCACCGTCACAACTTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCACAAGCTTTTCCCGAGTTTCAAAATATAGCCGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACGAATTGCGATACTACAACGTTTATTAATCAAAATGTAGCGGGAATAGCTGTAACAAATCTTGAAAATTCACCAATATTACAAGCTGATGAAGCTGGTTCAGTCACGTTGCCCGTTTACTCTGGCGATCAGACACTTACTCCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGTAATCACTCGAGGCATTCGAGTAGTACAAACACGAGTGATTTTAGTCATATGAAAGAACAACAGCAACCTGTATTGAATGTTATATATGAAAATAACAATAACAGTAACTGTAATAGCAACGTAGAATCAGCCGGAGAACACGTATTTTCGACGCAATTAGATTCATTTGAGATGGACCATATTACTTTGCAGTCGGACACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGTATACTACCTAGGAATGTAAAAGATGAACATCGTCTATCTGTTTGTGTTACGACACCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTTACCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGAAACCCACAAGAACAGCATTCACAAACAATGTATAATCAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGATTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCGCTACGGGCAAAATATCCCGTGGACAATCTCTGTTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAAGAATATCAGTGCACGGAGTGCTCTTCTAAATTTTACACAAATGGTGGATTAAATAGACATTCGAAGATTCATGTCGTCAAGCAACCATTTAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAATCCAATTGCTATCGCATAGTAAAATTCATGAAACTTCAATATGGAATGCCTCAGGGATAAACGATAATTCAGATAATTCGACGTTTTTATCAGAGGTGCATCAACCACGGATTGCAAATGATCATTCACCATTACATAATATTATGATAGAACCCGATTCTGCCGTTTCTGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGCTGGAAAAGAAGGAACGAAAAGAGTATACAAACAAATGTTCGAAACCATTTAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATCCAAAGAGAAAACAAAAACATTTAAAGGTTGAAGTCATAGCTGAAGTAGCGACTGATTTTGAGGAATGTGACATAAAGGAAGAGAAAATGAATAATTTTGAGCCAAAGCAGCAAATAGCACAGGAACAGCAGCTATCACAGACAGTTGCAGGATTAACGTCCCATTTAGAGGCATATAGCATTGAAACAGCTGCTTCCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACTATACAAACCGATGAATCGTTGTTGTCACAATCATCTGCATCACCAGCTAACAATTCGCAGCATCGACCGGCTGGGGTTCCCGATACTGGGTGTGCACTAACAGCACCCAGCGTCGTATCTGATACTAACGAACAACATGTCAAGGATGAAATTCATATAGAACAAATGTTAAAAACGCCAGCAAATAATTGTCTTTTAGCGATATCAACTGTGACACCTTCATTGGAACGACAACTGGAACCATTTTCAAAGGTGATTACGGAAGAAACGTTACCAGTAGTAGCCAATAAACCGACGATTAAAGGGAATCCATCGAAAAAGGAATGCGACATTTGTGGGAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGGCCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACACCACACCGGCGATCGACCCTATGCTTGTTCGTACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACACGTTAAACGCGTACATCAACTGGATACTGTTGATATCAGGAAATGGAAACGTAGCCGTCAATCCTTCCTACCGAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTACTTAAATAG
Protein Sequence
MLTRHSVVTESPSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNSIDQIKLQSCRELTCKETVIQEYQSLSLNDSVASEKDGKICKQKPINTSVKKNSPGRPKKNKAISLQDTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPDGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTINDNTHSSNTVESDIRATVDNVITQLASLESDIHQTTEPANFEPRLLTENVTKKDILQQALKNSGLPSKNKIASEEIKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKAFVCHSSLIAHTRSHAKSDNCSNKTTDNDKDPDPYAVIDADIYPTGQSKNQIKGKLKLSPEAESLVPQVILQEPLVISDTGNKISVVSSGKERRAYDTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKENFKQEAALESSSSTSASIATINSTITSNISVATTATTSTTPTTVTTSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNIAEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFSHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFTKKENITNEFTVEETHKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTATGKISRGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQPFKCLSCEKQFNNRIQLLSHSKIHETSIWNASGINDNSDNSTFLSEVHQPRIANDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVEVIAEVATDFEECDIKEEKMNNFEPKQQIAQEQQLSQTVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTDESLLSQSSASPANNSQHRPAGVPDTGCALTAPSVVSDTNEQHVKDEIHIEQMLKTPANNCLLAISTVTPSLERQLEPFSKVITEETLPVVANKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRSRQSFLPKTSLQENTIEAKSLNLDNISFVELLK