Basic Information

Insect: Bombus skorikovi
Gene Symbol: ZNF236
Assembly: GCA_014737355.1
Location: JACXIH010000100.1:1864415-1872410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0024 0.22 12.2 2.1 2 23 176 197 175 197 0.96

2 26 0.0001 0.0097 16.5 1.1 1 23 203 225 203 225 0.98

3 26 3.1e-06 0.00029 21.2 0.4 2 23 231 252 231 252 0.97

4 26 0.0083 0.77 10.5 0.3 3 23 260 280 258 280 0.96

5 26 6.8e-05 0.0063 17.0 0.9 2 23 291 312 291 312 0.98

6 26 7.5e-07 6.9e-05 23.2 1.1 1 23 333 355 333 355 0.99

7 26 2.9e-06 0.00027 21.3 0.8 1 20 361 380 361 383 0.95

8 26 2.8e-05 0.0026 18.3 0.7 1 23 389 412 389 412 0.95

9 26 0.0026 0.24 12.0 2.2 3 23 423 444 421 444 0.97

10 26 1.9e-06 0.00017 21.9 2.1 1 23 567 589 567 589 0.98

11 26 0.00032 0.029 14.9 3.3 1 23 595 617 595 617 0.99

12 26 0.049 4.5 8.1 1.6 1 23 623 645 623 645 0.97

13 26 0.0028 0.26 12.0 6.7 1 23 736 758 736 758 0.98

14 26 3.4e-05 0.0031 18.0 5.1 1 23 764 786 764 786 0.99

15 26 0.00026 0.024 15.2 1.0 3 23 794 814 792 814 0.97

16 26 0.00041 0.037 14.6 7.6 1 23 820 842 820 842 0.98

17 26 2.4 2.2e+02 2.7 1.3 2 23 1241 1262 1240 1262 0.94

18 26 0.004 0.37 11.5 2.7 1 23 1268 1290 1268 1290 0.98

19 26 0.0071 0.65 10.7 1.6 1 23 1296 1318 1296 1318 0.98

20 26 1e-07 9.6e-06 25.9 1.4 2 23 1397 1418 1396 1418 0.98

21 26 0.00074 0.068 13.8 3.5 1 23 1424 1446 1424 1446 0.99

22 26 9.5e-05 0.0087 16.6 1.9 1 23 1452 1474 1452 1474 0.98

23 26 0.00038 0.035 14.7 2.5 1 23 1480 1502 1480 1502 0.98

24 26 9.1e-06 0.00084 19.8 0.4 2 23 1727 1748 1726 1748 0.97

25 26 1.3e-05 0.0012 19.3 4.5 1 23 1754 1776 1754 1776 0.98

26 26 2.7e-06 0.00025 21.4 1.1 1 23 1782 1805 1782 1805 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0024	0.22	12.2	2.1	2	23	176	197	175	197	0.96
2	26	0.0001	0.0097	16.5	1.1	1	23	203	225	203	225	0.98
3	26	3.1e-06	0.00029	21.2	0.4	2	23	231	252	231	252	0.97
4	26	0.0083	0.77	10.5	0.3	3	23	260	280	258	280	0.96
5	26	6.8e-05	0.0063	17.0	0.9	2	23	291	312	291	312	0.98
6	26	7.5e-07	6.9e-05	23.2	1.1	1	23	333	355	333	355	0.99
7	26	2.9e-06	0.00027	21.3	0.8	1	20	361	380	361	383	0.95
8	26	2.8e-05	0.0026	18.3	0.7	1	23	389	412	389	412	0.95
9	26	0.0026	0.24	12.0	2.2	3	23	423	444	421	444	0.97
10	26	1.9e-06	0.00017	21.9	2.1	1	23	567	589	567	589	0.98
11	26	0.00032	0.029	14.9	3.3	1	23	595	617	595	617	0.99
12	26	0.049	4.5	8.1	1.6	1	23	623	645	623	645	0.97
13	26	0.0028	0.26	12.0	6.7	1	23	736	758	736	758	0.98
14	26	3.4e-05	0.0031	18.0	5.1	1	23	764	786	764	786	0.99
15	26	0.00026	0.024	15.2	1.0	3	23	794	814	792	814	0.97
16	26	0.00041	0.037	14.6	7.6	1	23	820	842	820	842	0.98
17	26	2.4	2.2e+02	2.7	1.3	2	23	1241	1262	1240	1262	0.94
18	26	0.004	0.37	11.5	2.7	1	23	1268	1290	1268	1290	0.98
19	26	0.0071	0.65	10.7	1.6	1	23	1296	1318	1296	1318	0.98
20	26	1e-07	9.6e-06	25.9	1.4	2	23	1397	1418	1396	1418	0.98
21	26	0.00074	0.068	13.8	3.5	1	23	1424	1446	1424	1446	0.99
22	26	9.5e-05	0.0087	16.6	1.9	1	23	1452	1474	1452	1474	0.98
23	26	0.00038	0.035	14.7	2.5	1	23	1480	1502	1480	1502	0.98
24	26	9.1e-06	0.00084	19.8	0.4	2	23	1727	1748	1726	1748	0.97
25	26	1.3e-05	0.0012	19.3	4.5	1	23	1754	1776	1754	1776	0.98
26	26	2.7e-06	0.00025	21.4	1.1	1	23	1782	1805	1782	1805	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCACATGTTGATACAATACCTATAAATCTCGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGAACAAAGTGAAGCAGCATCGCCATTAGTGGATGTAAAAAATTTTAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAACATTGATCTAATAAAGTTACAATCATGCAGAGAATTAACATGCAAGGGAACAGTTACACAAGAATATCAGTCTCTTTGTTCGAATGATTCAGTAGCTAGTGAAAAGGATGGAAAAATTTGTAAACAGAAGCCAATTAATACATCTGTGAAAAAAAATAGCCCTGGAAGGCCCAAGAAAAACAAAGCAATTTCTTTGCAAGGTACAGATAGTTTAACATGTGACATTTGCCACCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCTTTCAATGTGCCGACAAATTTTACACTTCACATGGCAACGCATAATACAGGTGAACCTAAATGTCCAGAATGTGGGAAAAAATTTGCGAGAATGGCTAGCTTAAAGTCTCATATGTTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGTGAAGATGCTTTCTCAACAAAGACTCAGTTAGATGCACATTTAAAGCTACATGGGGAAAAGTGGACGATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTATATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGAGGGACAAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCCTTTCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTCAAGTGTACAGACTGCGGTCGTGCATTCACACAAAAGAGTTCGCTGCAAATTCATACGTGGCAACACAATGGTATTCGACCTCATGCTTGTGAATTTTGCAACGCCAAGTTTAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTTCACAATGTCCCAGAGGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACCATTAATGACAATACTCATTCGAGTAATACCGTGGAGTCAGATATACGTGCAACAGTTGATAACGTTATAACACAACTGACATCTTTAGAATCCAACATTCATCAAACTACAGAATCGTCAAATTTCGAACCGCGTTTATTATCGGAAAACGTAACGAAAAAGGATATTTTACAACAAGCATTGAAAAACAGTGGTCTTCCTAGTAAAAATAAAATTGCTTCTGAAGAGACAAAGAAATTTGGAGCTCGTGTTAATTTTGTAACATTATTGGATCGAGCGCCTGATGGTGATACGAGAAAATATTTGACAATAAAACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACGCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTCAAACGTTACGCTTGTGGTTCCTGCGAGAAAGCATTCGTGTGCCATAGTAGTTTAATTGCACATACTAGATTGCATGCAAAGTCCGAAAATTGTTCAAATAAAACCACTGACAATGATAAGGACCCCGACACATATGCAGTAATTGATGCTGACATTTATCCTACTGATCAATTGAAAAATCAAATAAAGGGTAAATTAAAATTATCACCGGAAGTAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGATACAGGAAATAAAATTTCCGTGGTATCTTCGGGAAAGGAAAAACGTGCTTATGATACATCTACTGATCAGGCCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCACTTGAAGCAACATCATCGCCGCCACACGGGAGAACGTCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAAGATTCGAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTCAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCAAATATGAAGGAAAGTTCTAAACAAGAAGCAGCTCTTGAATCGTCTTCCACCTCTTCTGCCTCTATCACTACTATTAATTCCACTATTACCAGCAACATCTCCATCACTACCACTGCCACTACCAGTACCACCCCTACCACCGTCACAACTTCCTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGACTTGGATCGGTTGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCACAAGCTTTTCCCGAGTTTCAAAATATAACTGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACAAATTGCGATACTACAACGTTTATCAATCAAAATGTAGCGGGAATAGCTGTAACAAATCTTGAAAATTCACCAATATTACAAGCTGATGAAGCTGGTTCAGTCACGTTGCCCGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGTAATCACTCGAGACATTCGAGTAGTACAAACACGAATGATTTTAGTCATATGAAAGAACAACAGCAACCTGTATTGAATGTTATATATGAAAATAACAATAACAGTAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACGCAATTAGATTCATTTGAGATGGACCATATTACATTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGCATACTACCTAGGAATGTAAAAGATGAACATCGTCTTTCTGTTTGTGTTACGACACCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTCGCCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGCAACCCAGAAGAACAGTATTCACAAACAATGTATAATCAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGATTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCGCTACGGGCAAAATATCCCGTGGACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACAGAGTGCTCTTCTAAATTTCACACAAATGGTGGATTAAATAGACATTCGAAAATTCATGTCGTCAAGCAACCATTTAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAATCCAGTTGCTATCACATAGTAAAATTCATGAAACTTCAGTATGGAATGCTTCAGTGATAAATAATAATTCAGATAATTCGACGTTTTTATCGGAAGTGAATCAACCACGGATTGAAAATGATCATTCACCATTACATAATATTATGATAGAACCCGATTCTGCCGTTTCTGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGCTGGAAAAGAAGGAACAGAAAGAGTATACAAACAAATGTAAATATTGTCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCATACAAGTGCGATTATTGCAGTAAAAGTTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGCTGCCATGTGTGCAATAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTTAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATCCAAAGAGAAAACAAAAACATGTGAAGGTTGCAGTCATAACTGAAGTAGCGACTGATCTTGAGAAATGTGACGGAAAGGAAGAGAAAATGAATAATTTTGAGCCAAAGCAGCAAATAGCACAGGAACAGCAGCTATCACAGGCAGTTGCAGGATTAACGTCCCATTTAGAGGCATATAGTATTGAAACAGCTGCTTCCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAAACGATTGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACTATACAAACCGAAGAATCGTTGTTGTCACAATCATCTGCATCACCAGCTAACAATTCGCAGCATCGGCCAGCTGGGATTCCCGATACTGGGTGTGCATTAACAACACCCAGCGTCATATCTGATACTAACGAACAACATGCCAAGGATGAAATTCATATAGAACAAATGTTAAAAACGCCAGCAAATAATTGTCTTTTAGCGATATCAACTGTGACACCTTCATTGGAACGACAGCTGGAACCATTTTCAAAGGTGACTACGGAAGAAACGTTACCAGTAGTAGCCAATAAACCGACGATTAAAGGGAATCCATCGAAAAAGGAATGTGATATTTGTGGGAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGGCCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACATCACACTGGCGATCGACCCTACGCTTGTTCGTACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTCAAACGCGTACATCAACTGGATACTGTTGATATCAGGAAATGGAAACGTAGCCGTCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVEQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNNIDLIKLQSCRELTCKGTVTQEYQSLCSNDSVASEKDGKICKQKPINTSVKKNSPGRPKKNKAISLQGTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTINDNTHSSNTVESDIRATVDNVITQLTSLESNIHQTTESSNFEPRLLSENVTKKDILQQALKNSGLPSKNKIASEETKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKAFVCHSSLIAHTRLHAKSENCSNKTTDNDKDPDTYAVIDADIYPTDQLKNQIKGKLKLSPEVESLVPQVILQEPLVISDTGNKISVVSSGKEKRAYDTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKESSKQEAALESSSTSSASITTINSTITSNISITTTATTSTTPTTVTTSSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTNDFSHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFAKKENITNEFTVEATQKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTATGKISRGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFHTNGGLNRHSKIHVVKQPFKCLSCEKQFNNRIQLLSHSKIHETSVWNASVINNNSDNSTFLSEVNQPRIENDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKEQKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHVKVAVITEVATDLEKCDGKEEKMNNFEPKQQIAQEQQLSQAVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTEESLLSQSSASPANNSQHRPAGIPDTGCALTTPSVISDTNEQHAKDEIHIEQMLKTPANNCLLAISTVTPSLERQLEPFSKVTTEETLPVVANKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRSRQSFLPKTSLQENTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -