Basic Information

Insect: Bombus soroeensis
Gene Symbol: ZNF236
Assembly: GCA_014737365.1
Location: JACXIL010000166.1:2064179-2072831[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0023 0.21 12.2 2.1 2 23 175 196 174 196 0.96

2 26 0.0001 0.0094 16.5 1.1 1 23 202 224 202 224 0.98

3 26 3e-06 0.00028 21.2 0.4 2 23 230 251 230 251 0.97

4 26 0.008 0.75 10.5 0.3 3 23 259 279 257 279 0.96

5 26 6.5e-05 0.0061 17.0 0.9 2 23 290 311 290 311 0.98

6 26 7.2e-07 6.7e-05 23.2 1.1 1 23 332 354 332 354 0.99

7 26 2.8e-06 0.00026 21.4 0.8 1 20 360 379 360 382 0.95

8 26 2.7e-05 0.0025 18.3 0.7 1 23 388 411 388 411 0.95

9 26 0.0025 0.24 12.0 2.2 3 23 422 443 420 443 0.97

10 26 1.8e-06 0.00017 21.9 2.1 1 23 566 588 566 588 0.98

11 26 0.00031 0.029 14.9 3.3 1 23 594 616 594 616 0.99

12 26 0.038 3.6 8.3 2.5 1 23 622 644 622 644 0.97

13 26 0.0027 0.25 12.0 6.7 1 23 735 757 735 757 0.98

14 26 3.3e-05 0.003 18.0 5.1 1 23 763 785 763 785 0.99

15 26 0.00025 0.024 15.2 1.0 3 23 793 813 791 813 0.97

16 26 0.00039 0.036 14.6 7.6 1 23 819 841 819 841 0.98

17 26 2.3 2.2e+02 2.7 1.3 2 23 1238 1259 1237 1259 0.94

18 26 0.00068 0.063 13.9 1.3 1 23 1265 1287 1265 1287 0.98

19 26 0.0068 0.64 10.7 1.6 1 23 1293 1315 1293 1315 0.98

20 26 1e-07 9.3e-06 25.9 1.4 2 23 1394 1415 1393 1415 0.98

21 26 0.00071 0.066 13.8 3.5 1 23 1421 1443 1421 1443 0.99

22 26 9.1e-05 0.0085 16.6 1.9 1 23 1449 1471 1449 1471 0.98

23 26 0.00037 0.034 14.7 2.5 1 23 1477 1499 1477 1499 0.98

24 26 8.7e-06 0.00082 19.8 0.4 2 23 1724 1745 1723 1745 0.97

25 26 1.3e-05 0.0012 19.3 4.5 1 23 1751 1773 1751 1773 0.98

26 26 2.6e-06 0.00024 21.4 1.1 1 23 1779 1802 1779 1802 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0023	0.21	12.2	2.1	2	23	175	196	174	196	0.96
2	26	0.0001	0.0094	16.5	1.1	1	23	202	224	202	224	0.98
3	26	3e-06	0.00028	21.2	0.4	2	23	230	251	230	251	0.97
4	26	0.008	0.75	10.5	0.3	3	23	259	279	257	279	0.96
5	26	6.5e-05	0.0061	17.0	0.9	2	23	290	311	290	311	0.98
6	26	7.2e-07	6.7e-05	23.2	1.1	1	23	332	354	332	354	0.99
7	26	2.8e-06	0.00026	21.4	0.8	1	20	360	379	360	382	0.95
8	26	2.7e-05	0.0025	18.3	0.7	1	23	388	411	388	411	0.95
9	26	0.0025	0.24	12.0	2.2	3	23	422	443	420	443	0.97
10	26	1.8e-06	0.00017	21.9	2.1	1	23	566	588	566	588	0.98
11	26	0.00031	0.029	14.9	3.3	1	23	594	616	594	616	0.99
12	26	0.038	3.6	8.3	2.5	1	23	622	644	622	644	0.97
13	26	0.0027	0.25	12.0	6.7	1	23	735	757	735	757	0.98
14	26	3.3e-05	0.003	18.0	5.1	1	23	763	785	763	785	0.99
15	26	0.00025	0.024	15.2	1.0	3	23	793	813	791	813	0.97
16	26	0.00039	0.036	14.6	7.6	1	23	819	841	819	841	0.98
17	26	2.3	2.2e+02	2.7	1.3	2	23	1238	1259	1237	1259	0.94
18	26	0.00068	0.063	13.9	1.3	1	23	1265	1287	1265	1287	0.98
19	26	0.0068	0.64	10.7	1.6	1	23	1293	1315	1293	1315	0.98
20	26	1e-07	9.3e-06	25.9	1.4	2	23	1394	1415	1393	1415	0.98
21	26	0.00071	0.066	13.8	3.5	1	23	1421	1443	1421	1443	0.99
22	26	9.1e-05	0.0085	16.6	1.9	1	23	1449	1471	1449	1471	0.98
23	26	0.00037	0.034	14.7	2.5	1	23	1477	1499	1477	1499	0.98
24	26	8.7e-06	0.00082	19.8	0.4	2	23	1724	1745	1723	1745	0.97
25	26	1.3e-05	0.0012	19.3	4.5	1	23	1751	1773	1751	1773	0.98
26	26	2.6e-06	0.00024	21.4	1.1	1	23	1779	1802	1779	1802	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCGCATGTCGATACAATACCTATAAATCTCGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCGGTTATGCTTGTTGGACAAAGTGAAGCAGCATCGCCACTAGTGGATGTAAAAAATTTTAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAGCTTCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAGCATTGAACAATCATGCAGAGAATTAACATGCAAGGAAACAGTTACACAAGAATATCAGTCTCTTTCTTCGAATGATTCAGTAGCTAGTGAAAAGGATAGAAATATTTGTAAACAAAAGCCAATTAATACATCTGTGAAAAAAAATAGCCCTGGAAGGCCCAAGAAAAACAAAGCAATTTCTTTGCAAGTAATTCAAGATACAGATAGTTTAACATGCGACATTTGCCATCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACACATAATACAGGTGAACCAAAATGTCCAGAATGTGGGAAAAAATTTGCGAGAATGGCTAGCTTAAAGTCTCATATGTTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAGACTCAATTAGATGCACATTTAAAGCTACATGGGGAAAAGTGGACGATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTATATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGAGGGACAAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCTTTTCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTTAAGTGTACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCACTGCAAATTCATACGTGGCAACACAATGGTATTCGACCTCATGCTTGTGAGTTTTGCAATGCCAAGTTTAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTTCACAATGTCCCAGAAGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACCGTTAATGACAATACTCATTCGAGTAATACCGTGGAGTCTGATATACGTGCAACAGTTGATAGTGTTATAACACAACTGGCATCTTTAGAATCCGACATTCATCAAACTACAGAATCGTCAAATTTTGAACCGCGTTTATTATCGGAGAACGTAACGAAAAAGGATATTTTACAACAAGCATTGAAAAACAGTGGTCTTCCTAGTAAAAATAAAACTGCATCTGAAGAGATAAAAAAGTTTGGAGCCCGTGTTAATTTTGTAACATTATTGGACCGAGCGCCTGATGGTGACACGAGAAAATATTTGACAATAAAACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACGCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGTGGTTCCTGCGAGAAAACATTCGTGTGCCATAGTAGTTTAATTGCACATACTAGATTGCATGCGAAGTCCGAAAATTGTTCAAATAAAACCACTGACAATGATAAGGATTCCGACACATATGCAGTAATTGATGCTGACATTTATCCTACTGATCAATCGAAAAATCAAATAAAGGGTAAATTAAAATTATCACCGGAAGCAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGATACAGGAAATAAAATTTCCGTGGTATCTTCGGGAAAGGAAAAACGTGCTTATAATACATCTACTGATCAGGCCAGACCTCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCACTTGAAGCAACATCATCGCCGCCACACGGGAGAACGTCCATATAAATGTACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAAGATTCGAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTCAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCGAATATGAAGGAAAGTTCTAAACAAGAAGCAGCTCTTGAATCGTCTTCCTCCTCTTCTGCCTCTATCACTACTATTAATTCCGCTATTACCAGCAACATCTCCATCACTACCACTGCCACTACCAGTACCACCCCTACCACCGTCACAACTTCCTCTTCTACGTTTTCAGATAATCTTGCGCTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCACAAGCTTTTCCCGAGTTTCAAAATATAACTGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACAAATTGCGATACTACAACGTTTATTAATCAAAATGTAGCGGGAATAGCTGTAACAAATCTTGAAAATTCACCGATATTACAAGCTGACGAAGCGGGTTCAGTCACGTTGCCCGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGCAATCACTCGAGACATTCGAGTAGTACAAACACGAGTGATTTTAGTCATATGAAAGAACAGCAACCTGTATTGAATGTTATATATGAAAATAACAATAACAGTAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACGCAATTAGATTCATTTGAGATGGACCATATTACTTTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGTATACTACCTAGGAATGTAAAAGATGAACACCGTCTTTCTGTTTGTGTTACAACACCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTCTCCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGAAACCCAGAAGAACAGTATTCACAAACAATGTATAATCAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGATTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCGCTACGGGCAAAATATCTCGTGGACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTTACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACAGAGTGCTCTTCTAAATTTTACACAAATGGTGGATTAAATAGACATTCGAAGATTCATGTAGTCAAGCAACTATTTAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAATCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAATATGGAATGCTTCAGGGATAAATGATAATTCAGATAATTCGACGTTTCTATCGGAAATGCATCAACCACGGATTGCAAATGATCATTCGCCATTACATAATATTATGATAGAACCCGATTCTGCCGTTTCTGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGCTGGAAAAGAAGGAACGAAAAGAGTATACAAACAAATGTAAATATTGTCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCATACAAGTGCGATTATTGCAGTAAAAGTTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGCTGCCATGTGTGCAATAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTTAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACATAAAGATAATCCAAAGAGAAAACAAAAACATTTGAAGGTTGCAGTCATAGCCGAAGTAGCTACTGATCTCGAGAAATGTGACGGAAAGGAAGAGAAAATGAATAATTTTGAGCCAAAGCAGCAAATAGCACAGGAACAGCAGCTATCACAGGCAGTTGCAGGATTAACGTCCCATTTAGAGGCATACAGTATTGAAACAGCTGCTTCCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACTATACAAGCCGAAGAATCGGTGTTGTCACAATCATCTGCATCACCAGCTAACAATTCGCAGCATCGACCGGCTGGGCTTCCCGATACTGGGTGTGCACTAACAACACCCAGCGTCGTATCTGATACTAACGAACAACATGCCAAGGACGAAATTCATATAGAACAAATGTTAAAAACGCCAGCAAATAATTGTCTTTTAGCGATATCAACTGTGACACCGTCATTGGAACGACAGCTGGAACCATTTTCAAAGGTGGCCACGGGAGAAACGTTACCAGTAGTAGCCGATAAACCGACGATTAAAGGGAATCCATCGAAAAAGGAATGCGACATTTGTGGGAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGGCCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACACCACACTGGTGATCGACCCTACGCTTGTTCGTACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTACATCAACTGGACACTGTTGACATCAGGAAATGGAAACGTAGCCGTCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNSIEQSCRELTCKETVTQEYQSLSSNDSVASEKDRNICKQKPINTSVKKNSPGRPKKNKAISLQVIQDTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTVNDNTHSSNTVESDIRATVDSVITQLASLESDIHQTTESSNFEPRLLSENVTKKDILQQALKNSGLPSKNKTASEEIKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKTFVCHSSLIAHTRLHAKSENCSNKTTDNDKDSDTYAVIDADIYPTDQSKNQIKGKLKLSPEAESLVPQVILQEPLVISDTGNKISVVSSGKEKRAYNTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKESSKQEAALESSSSSSASITTINSAITSNISITTTATTSTTPTTVTTSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFSHMKEQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTATGKISRGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQLFKCLSCEKQFNNRIQLLSHSKIHETSIWNASGINDNSDNSTFLSEMHQPRIANDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVAVIAEVATDLEKCDGKEEKMNNFEPKQQIAQEQQLSQAVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQAEESVLSQSSASPANNSQHRPAGLPDTGCALTTPSVVSDTNEQHAKDEIHIEQMLKTPANNCLLAISTVTPSLERQLEPFSKVATGETLPVVADKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRSRQSFLPKTSLQENTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -