Basic Information

Insect: Bombus confusus
Gene Symbol: ZNF236
Assembly: GCA_014737475.1
Location: JACXIV010000052.1:2018607-2026840[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0027 0.21 11.9 1.4 2 23 174 195 173 195 0.95

2 26 9.9e-05 0.0076 16.5 1.1 1 23 201 223 201 223 0.98

3 26 3e-06 0.00023 21.2 0.4 2 23 229 250 229 250 0.97

4 26 0.0078 0.61 10.5 0.3 3 23 258 278 256 278 0.96

5 26 6.4e-05 0.0049 17.0 0.9 2 23 289 310 289 310 0.98

6 26 7.1e-07 5.4e-05 23.2 1.1 1 23 331 353 331 353 0.99

7 26 2.8e-06 0.00021 21.3 0.8 1 20 359 378 359 381 0.95

8 26 2.6e-05 0.002 18.3 0.7 1 23 387 410 387 410 0.95

9 26 0.0025 0.19 12.0 2.2 3 23 421 442 419 442 0.97

10 26 1.8e-06 0.00014 21.9 2.1 1 23 565 587 565 587 0.98

11 26 0.0003 0.023 14.9 3.3 1 23 593 615 593 615 0.99

12 26 0.038 2.9 8.3 2.5 1 23 621 643 621 643 0.97

13 26 0.0026 0.2 12.0 6.7 1 23 734 756 734 756 0.98

14 26 3.2e-05 0.0025 18.0 5.1 1 23 762 784 762 784 0.99

15 26 0.00025 0.019 15.2 1.0 3 23 792 812 790 812 0.97

16 26 0.00038 0.03 14.6 7.6 1 23 818 840 818 840 0.98

17 26 2.3 1.8e+02 2.7 1.3 2 23 1240 1261 1239 1261 0.94

18 26 0.00066 0.051 13.9 1.3 1 23 1267 1289 1267 1289 0.98

19 26 0.0067 0.52 10.7 1.6 1 23 1295 1317 1295 1317 0.98

20 26 3e-08 2.3e-06 27.5 1.4 2 23 1396 1417 1395 1417 0.98

21 26 0.00069 0.054 13.8 3.5 1 23 1423 1445 1423 1445 0.99

22 26 8.9e-05 0.0069 16.6 1.9 1 23 1451 1473 1451 1473 0.98

23 26 0.00036 0.028 14.7 2.5 1 23 1479 1501 1479 1501 0.98

24 26 8.6e-06 0.00066 19.8 0.4 2 23 1726 1747 1725 1747 0.97

25 26 1.3e-05 0.00098 19.3 4.5 1 23 1753 1775 1753 1775 0.98

26 26 2.6e-06 0.0002 21.4 1.1 1 23 1781 1804 1781 1804 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0027	0.21	11.9	1.4	2	23	174	195	173	195	0.95
2	26	9.9e-05	0.0076	16.5	1.1	1	23	201	223	201	223	0.98
3	26	3e-06	0.00023	21.2	0.4	2	23	229	250	229	250	0.97
4	26	0.0078	0.61	10.5	0.3	3	23	258	278	256	278	0.96
5	26	6.4e-05	0.0049	17.0	0.9	2	23	289	310	289	310	0.98
6	26	7.1e-07	5.4e-05	23.2	1.1	1	23	331	353	331	353	0.99
7	26	2.8e-06	0.00021	21.3	0.8	1	20	359	378	359	381	0.95
8	26	2.6e-05	0.002	18.3	0.7	1	23	387	410	387	410	0.95
9	26	0.0025	0.19	12.0	2.2	3	23	421	442	419	442	0.97
10	26	1.8e-06	0.00014	21.9	2.1	1	23	565	587	565	587	0.98
11	26	0.0003	0.023	14.9	3.3	1	23	593	615	593	615	0.99
12	26	0.038	2.9	8.3	2.5	1	23	621	643	621	643	0.97
13	26	0.0026	0.2	12.0	6.7	1	23	734	756	734	756	0.98
14	26	3.2e-05	0.0025	18.0	5.1	1	23	762	784	762	784	0.99
15	26	0.00025	0.019	15.2	1.0	3	23	792	812	790	812	0.97
16	26	0.00038	0.03	14.6	7.6	1	23	818	840	818	840	0.98
17	26	2.3	1.8e+02	2.7	1.3	2	23	1240	1261	1239	1261	0.94
18	26	0.00066	0.051	13.9	1.3	1	23	1267	1289	1267	1289	0.98
19	26	0.0067	0.52	10.7	1.6	1	23	1295	1317	1295	1317	0.98
20	26	3e-08	2.3e-06	27.5	1.4	2	23	1396	1417	1395	1417	0.98
21	26	0.00069	0.054	13.8	3.5	1	23	1423	1445	1423	1445	0.99
22	26	8.9e-05	0.0069	16.6	1.9	1	23	1451	1473	1451	1473	0.98
23	26	0.00036	0.028	14.7	2.5	1	23	1479	1501	1479	1501	0.98
24	26	8.6e-06	0.00066	19.8	0.4	2	23	1726	1747	1725	1747	0.97
25	26	1.3e-05	0.00098	19.3	4.5	1	23	1753	1775	1753	1775	0.98
26	26	2.6e-06	0.0002	21.4	1.1	1	23	1781	1804	1781	1804	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCGCATGTCGAGACAATACCTATAAATCTTGTTGCCACTGAAGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGCGTCACCACTGGTAGATGTAAAAAATTTTAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTGCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAGCATTGATCAAATAAAATTACAACCATACAGAGAATTAACATGCAAGGAAACAGTTACACAGGAATATCAGTCTCTTCCTTCCATTGATTCATTAGCTAGTGAAAAGGATGAAAAAATTTGTAAACCAATTAATGTATCTGTGAAAAAAAATAGTCCTGGAAGGCCCAAGAAAAACAAAGCAATTTCTTTGCAAGATACGGATAGTTTAATATGCGACATTTGCCACCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAGAAACCGCATCGATGTCCAAAATGTTCTGCATCGTTCAATGTGCCGACAAATTTTACGCTTCACATGGCAACGCATAATACAGGTGAACCGAAATGTCCAGAATGTGGGAAGAAATTTGCAAGAATGGCCAGCTTAAAGTCTCATATGTTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAAACCCAATTAGATGCACATTTAAAGCTACACGGGGAAAAGTGGACAATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTGTATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGAGGAACGAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCTTTTCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTTAAGTGCACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATACATGGCAGCACAATGGTATTCGACCTCATGCTTGTGAGTTTTGCAATGCCAAGTTTAGTCAAAAAGGTAATTTGAATGCCCATATAATGAGAGTTCACAATGTCCCAGAAGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAGAAGCTCGGAAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACCATTAATGATAATACTCATTCGAGTAGTACCGTGGAGTCCGATATACGTGCAACAGTGGATAACGTTATAACACAACTGGCATCTTTGGAATCCGACATTCATCAAACTACAGAAGCGCCAAATTTCGAACCTCGTTTATTATCGGAAAACGTAACGAAAAAGGATATTTTGCAACAAGCATTGAAAAACAGTGGTCTTCCTAGTAAAAATAAAATTGCTTCTGAAGAAATAAAGAAGTTGGGAACTCGCGTTAATTTTGTAACATTATTGGATCGAGCGCCTGATGGTGATACGAGAAAATATTTGACAATAAAACAACGATGTGTAGGAAACGTGAGATGGTACGCTTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACGCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGTGGTTCCTGCGAGAAGACATTTGTGTGCCATAGTAGTTTAATTGCACATACCAGATTGCATGCAAAGTCCGAAAATTGTTCCAATAAAACCACGGACAATAATAAGGATCCCGACACATACACAGTAATTGACGCTGGCATTTATCCTACTGATCAATCGAAAAATCAAATAAAGGGTAAATTAAAATTATCACCGGAAGCAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGATACAGGAAATAAAATTTCCGTGTTATCTTCGGGAAAGGAAAAACGTGCTTATGATACAGCTACTGATCAGGCCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATTAGTCACTTGAAGCAACATCATCGACGCCATACGGGAGAACGCCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAAGATTCAAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGTATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCAGGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCGAATATGAAGGAAAGTTCTGTACAAGAAGCGGCTCTTGAATCGTCTTCCTCTTCTTCTGCCTCTATCACTACTATTAATTCCACTATTACCAACAACATCTCGATCACTACCACTGCCACTGCCACTACCAGTACCACCCCTACCACCGTCACAACTCCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCGCAAGCTTTTCCCGAGTTTCAAAATATAACTGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACAAATTGCGATACTACAACGTTTATTAATCAAAACGTAGCGGGAATAGCTGTAACAAATCTTGAAAATGCACCGATATTACAAGCTGATGAAGCTGGTTCGGTCACGTTGCCCGTTTACTCTGGCGATCAGACATTTACACCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGTAATCACTCGAGACATTCGAGTAGTACAAACACGAGTGATTTTAGTCATATGAAAGAACAACAGCAACCTGTATTGAATGTTATATATGAAAATAATAATAACAGTAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACGCAATTAGATTCATTCGAGATGGACCATATTACTTTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGTATATTACCTAGGAATGTAAAAGATGAACATCAACTTTCTGTTTGTGTTACGACTCCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTTTCCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGAAACACAGAAGAACACTGTTCACAAACAATGTATAATCAACCCAATATTCTTTACAGAAGACTTTCGGGGAACATCGCAAGATTTCAAGGTTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATTGTTAAATCCGCTACAAGCAAAATATCCCATGGACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACAGAGTGCTCTTCTAAATTTTACACAAATGGCGGATTAAATAGACATTCGAAGATTCATGTCGTTAAGCAATCATTTAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAATCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAATATGGAACGCTTCAGGGATAAATGATAATTCAGATAATTCGACGTTTTTATCGGAAGTGCATCAACCACCGATTGCAAATGACCATTCACCATTAAATAATATTATGATAGAACCCGATTCTGCCGTTTCGGAGAAAGTTCTATTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGTTGGAAAAGAAGGAACGAAAAGAGTATACAAACAAATGCAAGTATTGTCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATATACGCACACACACAGGAGAACGACCATATAAGTGTGATTATTGCAGTAAAAGTTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACTGGAAAAAAGACGTTTCGCTGCCATGTGTGCAACAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTTAGATGTCCTATTTGCGATTCAAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATCCAAAGAGAAAACAAAAACATATGAAAGTTGCAGTCATAGCCCAAGTAGCGACTGATCTTGAGAAATGTGACAGAAAGGAAGAGAAAATGGATAATTTTGAGCCAAAACAGCAAATAGCACAGGAACAGCAGCTATCACAGACAGTTGCGGGATTAACGTCCCATTTAGAGACATATAGTATTGAAACAGCTGCTTCCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACCATACAAACCGAAGAATCGTTGTTGCCACAATCATCTGCATCACCAGCTAACAATTCGCATCATCAACCGGCTGGGGTTCCCGATACTGGGTGTGCACTAACAACACCCAGCGTCGTATCTGATAGTAATGAACAACATGCCAAGGACGAAATTCATATAGAACAAATGTTAAAAACGCCATCGAATAATTGCCTTTTAGCGATATCAACTGTGGAACGGTCATTGGAACGACATCTGGAACCATTTTCAAAGGCGACTACGGAAGAAGCGTTACCAGTAATAGCCGATAAACCAACGATTAAAGGGAATCCATCGAAAAAAGAATGCGATATTTGTGGAAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCACACGGGTGAACGGCCATACAAGTGTGATTTATGTACGAAATCATTTGCCCAAAAATCAACTCTACAGATGCATCAAAAACACCACACTGGCGATCGACCATACGCTTGTTCGTACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTGCATCAACTGGATACTGTTGACATCAGGAAATGGAAACGCAACCGCCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAAAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVETIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNSIDQIKLQPYRELTCKETVTQEYQSLPSIDSLASEKDEKICKPINVSVKKNSPGRPKKNKAISLQDTDSLICDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTINDNTHSSSTVESDIRATVDNVITQLASLESDIHQTTEAPNFEPRLLSENVTKKDILQQALKNSGLPSKNKIASEEIKKLGTRVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKTFVCHSSLIAHTRLHAKSENCSNKTTDNNKDPDTYTVIDAGIYPTDQSKNQIKGKLKLSPEAESLVPQVILQEPLVISDTGNKISVLSSGKEKRAYDTATDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKQELAQRQLEQQKIRIQEQASDKSNMKESSVQEAALESSSSSSASITTINSTITNNISITTTATATTSTTPTTVTTPSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENAPILQADEAGSVTLPVYSGDQTFTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFSHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHQLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNTVHKQCIINPIFFTEDFRGTSQDFKVQSNMHALSSDVPEIVKSATSKISHGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSFKCLSCEKQFNNRIQLLSHSKIHETSIWNASGINDNSDNSTFLSEVHQPPIANDHSPLNNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHMKVAVIAQVATDLEKCDRKEEKMDNFEPKQQIAQEQQLSQTVAGLTSHLETYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTEESLLPQSSASPANNSHHQPAGVPDTGCALTTPSVVSDSNEQHAKDEIHIEQMLKTPSNNCLLAISTVERSLERHLEPFSKATTEEALPVIADKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRNRQSFLPKTSLQENTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -