Basic Information

Insect: Bombus terrestris
Gene Symbol: ZNF236
Assembly: GCA_000214255.1
Location: NC:2053263-2062101[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0018 0.11 12.2 2.1 2 23 179 200 178 200 0.96

2 26 7.8e-05 0.0048 16.4 1.1 1 23 206 228 206 228 0.98

3 26 2.3e-06 0.00014 21.2 0.4 2 23 234 255 234 255 0.97

4 26 0.0062 0.38 10.5 0.3 3 23 263 283 261 283 0.96

5 26 5.1e-05 0.0031 17.0 0.9 2 23 294 315 294 315 0.98

6 26 5.6e-07 3.4e-05 23.2 1.1 1 23 336 358 336 358 0.99

7 26 2.2e-06 0.00013 21.3 0.8 1 20 364 383 364 386 0.95

8 26 2.1e-05 0.0013 18.3 0.7 1 23 392 415 392 415 0.95

9 26 0.002 0.12 12.0 2.2 3 23 426 447 424 447 0.97

10 26 1.4e-06 8.6e-05 21.9 2.1 1 23 570 592 570 592 0.98

11 26 0.00024 0.015 14.9 3.3 1 23 598 620 598 620 0.99

12 26 0.036 2.2 8.1 1.6 1 23 626 648 626 648 0.97

13 26 0.0021 0.13 12.0 6.7 1 23 739 761 739 761 0.98

14 26 2.5e-05 0.0016 18.0 5.1 1 23 767 789 767 789 0.99

15 26 0.0002 0.012 15.2 1.0 3 23 797 817 795 817 0.97

16 26 0.0003 0.019 14.6 7.6 1 23 823 845 823 845 0.98

17 26 1.8 1.1e+02 2.7 1.3 2 23 1243 1264 1242 1264 0.94

18 26 0.00053 0.032 13.8 1.3 1 23 1270 1292 1270 1292 0.98

19 26 0.0053 0.32 10.7 1.6 1 23 1298 1320 1298 1320 0.98

20 26 7.8e-08 4.8e-06 25.9 1.4 2 23 1399 1420 1398 1420 0.98

21 26 0.00055 0.034 13.8 3.5 1 23 1426 1448 1426 1448 0.99

22 26 7.1e-05 0.0043 16.6 1.9 1 23 1454 1476 1454 1476 0.98

23 26 0.00029 0.018 14.7 2.5 1 23 1482 1504 1482 1504 0.98

24 26 6.8e-06 0.00042 19.8 0.4 2 23 1729 1750 1728 1750 0.97

25 26 1e-05 0.00061 19.3 4.5 1 23 1756 1778 1756 1778 0.98

26 26 2e-06 0.00012 21.4 1.1 1 23 1784 1807 1784 1807 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0018	0.11	12.2	2.1	2	23	179	200	178	200	0.96
2	26	7.8e-05	0.0048	16.4	1.1	1	23	206	228	206	228	0.98
3	26	2.3e-06	0.00014	21.2	0.4	2	23	234	255	234	255	0.97
4	26	0.0062	0.38	10.5	0.3	3	23	263	283	261	283	0.96
5	26	5.1e-05	0.0031	17.0	0.9	2	23	294	315	294	315	0.98
6	26	5.6e-07	3.4e-05	23.2	1.1	1	23	336	358	336	358	0.99
7	26	2.2e-06	0.00013	21.3	0.8	1	20	364	383	364	386	0.95
8	26	2.1e-05	0.0013	18.3	0.7	1	23	392	415	392	415	0.95
9	26	0.002	0.12	12.0	2.2	3	23	426	447	424	447	0.97
10	26	1.4e-06	8.6e-05	21.9	2.1	1	23	570	592	570	592	0.98
11	26	0.00024	0.015	14.9	3.3	1	23	598	620	598	620	0.99
12	26	0.036	2.2	8.1	1.6	1	23	626	648	626	648	0.97
13	26	0.0021	0.13	12.0	6.7	1	23	739	761	739	761	0.98
14	26	2.5e-05	0.0016	18.0	5.1	1	23	767	789	767	789	0.99
15	26	0.0002	0.012	15.2	1.0	3	23	797	817	795	817	0.97
16	26	0.0003	0.019	14.6	7.6	1	23	823	845	823	845	0.98
17	26	1.8	1.1e+02	2.7	1.3	2	23	1243	1264	1242	1264	0.94
18	26	0.00053	0.032	13.8	1.3	1	23	1270	1292	1270	1292	0.98
19	26	0.0053	0.32	10.7	1.6	1	23	1298	1320	1298	1320	0.98
20	26	7.8e-08	4.8e-06	25.9	1.4	2	23	1399	1420	1398	1420	0.98
21	26	0.00055	0.034	13.8	3.5	1	23	1426	1448	1426	1448	0.99
22	26	7.1e-05	0.0043	16.6	1.9	1	23	1454	1476	1454	1476	0.98
23	26	0.00029	0.018	14.7	2.5	1	23	1482	1504	1482	1504	0.98
24	26	6.8e-06	0.00042	19.8	0.4	2	23	1729	1750	1728	1750	0.97
25	26	1e-05	0.00061	19.3	4.5	1	23	1756	1778	1756	1778	0.98
26	26	2e-06	0.00012	21.4	1.1	1	23	1784	1807	1784	1807	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCACATGTCGATACAATACCTATAAATCTCGTTGCTACTGAAGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGCATCACCACTAGtagatgtaaaaaattttaatggaaatctAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAGCATTGATCAAATAAAGTTACCATCATGCAGAGAATTAACATGCAAGGAAACAGTTACACAAGAATATCAGTCTCTTTCTTCGAATGATTCAATTGCTAGTgaaaatgatggaaaaatttgtaaacagAAGCCAATTAATACATCTGTGAAAAAAAATAGCCCTGGAAGGCCCAAGAAAAACAAAGCAATTTCTTTGCAAGTAATTCaaGATACAGATAGTTTAACATGCGATATTTGCCACCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACGCATAATACAGGTGAACCGAAATGTCCAGAATGTGGgaaaaaatttgcaagaatGGCTAGCTTAAAGTCTCATATGTTGTTacatgaaaaagaagaaaacttatTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAgACTCAATTAGATGCACATTTAAAGCTACATGGGGAAAAGTGGACGATTGAAGAAGTgcgaaaatgtaaattatgtaataaacaGTTCAGTCAACCCGCCTTATATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTagtaaaacaaacgaaaagaGGGACAAAACACAAAACAATGTATAAGTGTACTATATGTTTGAAGTCTTTTCAAAAGCCAAGTCAATTGATGCGACATATTAGAGTGCATACTGGTGAAAAACCTTTCAAAtgtACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATACGTGGCAACACAATGGTATTCGACCTCATGCTTGTGAGTTTTGCAACGCTAAGTTTAGTCAGAAagGTAATTTGAACGCTCATATAATGAGAGTTCACAATGTCCCAGAGGGAGAACCTATATATGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGAAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATAGCATTAATGACAATACTCATTCGAGTAATACCGTGGAGTCTGATATACGTGCAACAGTTGATAGTGTTATAACACAACTGGCATCTTTAGAATCCGACATTCATCAAACTACAGAATCGTCAAATTTCGAACCGCGTTTATTATCGGAAAACGTAACGAAAAAGGATATTTTACAACAAGCATTGAAAAACAGTGGTCTTcctagtaaaaataaaattgcctCTGAAGagataaagaaatttgGAGCTCGtgttaattttgtaacattattGGATCGAGCGCCTGATGGTGATACGAGaaaatatttgacaataaaACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACTCAAGAAAAGCCTTTCAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGTGGTTCCTGCGAGAAAGCATTCGTGTGCCATAGTAGTTTAATTGCACATACTAGATTGCATGCAAAGTCcgaaaattgttcaaataaaaCCACTGACAATGATAAGGATCCCGACACATATACAGTAATTGATGCTGACATTTATCCTACTGATCAatcgaaaaatcaaataaagggtaaattaaaattatcaccGGAAGCAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGAtacaggaaataaaatttccgtgGTATCTTCGGGAAAGGAAAAACGTGCTTATGATACATCTACTGATCAGGCCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCATTTGAAGCAACATCATCGCCGCCACACTGGAGAACGTCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAAGATTCGAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGTATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTCAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTAGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCAAATATGAAGGAAAGTTCTAAACAAGAAGCAGCTCTTGAATcgtcttcctcctcttctgtCTCTATCACTACGATTAATTCCACTATTACCAGCAACATTTCCGTCACTACCACTGCCACTACCAGTACCACCCCTACCACCGTCACAACTTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTCGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCACAAGCTTTTCCcgagtttcaaaatataactgaaggaaaggaaaaaataagacCAGTTTTAGCAACAAATTGCGATACTACAACGTTTATTAATCAAAATGTAGCAGGAATAGCTGTAACAAATCTTGAAAATTCACCAATATTACAAGCTGATGAAGCCGGTTCAGTCACGTTGCCCGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATAcgagaaatagaagaaactttGAATCAGCAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGTAATCACTCGAGACATTCGAGTAGTACAAACACGAGTGATTTTAGTCATATGAAAGAACAACAGCAACCTGTATTGAAtgttatatatgaaaataacaataacagtAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACGCAATTAGATTCATTTGAGATGGACCATATTACTTTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGTATACTACCTAGGAATGTAAAAGATGAACATCGTCTTTCTGTTTGTGTTACAACACCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTCTCcaaaaaagagaatataacAAATGAATTTACTGTAGAAGAAACCCAGAAGAACAGTATTCACAAACAATGTATAATAAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGATTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCGCTACGGGCAAAATATCCCGTGGACAATCACTATTACAGTGTCATATGTGTAGCCAGCAAGGATTCACGACAGTTGGTTTAAAgGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACGGAGTGCTCTTCTAAATTTTACACAAATGGTGGATTAAATAGACATTCGAAGATTCATGCCGTCAAGCAACCATTTAAATGTTTATCGTGTGAGAAGCAATTTAACAATAGAATCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAATATGGAATGCTTCAGGGATAAATGATAATTCAGATAATTCGACGTTTTTATCGGAAGTGCATCAACCACGGATTGCAAATGATCATTCAccattacataatattatgataGAGCCCGATTCTGCCGTTTCTGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATATTGTtggaaaagaaggaacgaaaagAGTATAcaaacaaatgtaaatattgtcCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCATACAAGTGCGATTATTGCAGTAAAAGTTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGTTGCCATGTGTGCAATAGTTTATTTGCAACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTTAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATccaaagagaaaacaaaaacatttGAAGGTTGCAGTCATAGCTGAAGTAGCGACTGATCTTGAGAAATGTGacggaaaagaagagaaaatgaataatttcgaGCCAAAACAGCAAATAGCACAAGAACAGCAACTATCACAGGCAGTTGCAGGATTAACGTCCCATTTAGAGGCATATAGTATTGAAACAGCTGCTTCCTGTTTATCtgatcaaattaatttcgacaCAGAAGGTATCGTATCGAACAACAATGAAACGATAGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACTATACAAACCGAAGAATCGTTGTTGTCACAATCATCTGCATCACCAGCTAACAATTCGCAGCATCGACCGGCTGGGGTTCCCGATACTGGGTGTGCACTAACAACACCCAACGTCGTATCTGATACTAATGAACAACATGCCAAGGATGAAATTCATATAGAACAAATGTTAAAAACGCCAGCAAATAATTGTCTTTTAGCGATATCAACCGTGACACCTTCATTGGAACGACAGCTGGAACCATTTCCAAAGGTGATTACAGAAGAAACGTTACCAGTAGTAGCCAATAAACCGACGATTAAAGGGAATCCATCGAAAAAGGAATGCGACATTTGTgggaaaatatttacaaaaccGTACCAAGTAGAAAGACATAAACGAATTCATACGGGTGAACGGCCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACACCATACTGGCGATCGACCCTACGCTTGTTCATACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTACATCAACTGGATACTGTTGACATCAGGAAATGGAAACGTAGCCGTCAATCCTTCTTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNSIDQIKLPSCRELTCKETVTQEYQSLSSNDSIASENDGKICKQKPINTSVKKNSPGRPKKNKAISLQVIQDTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENSINDNTHSSNTVESDIRATVDSVITQLASLESDIHQTTESSNFEPRLLSENVTKKDILQQALKNSGLPSKNKIASEEIKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKAFVCHSSLIAHTRLHAKSENCSNKTTDNDKDPDTYTVIDADIYPTDQSKNQIKGKLKLSPEAESLVPQVILQEPLVISDTGNKISVVSSGKEKRAYDTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKESSKQEAALESSSSSSVSITTINSTITSNISVTTTATTSTTPTTVTTSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFSHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTATGKISRGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHAVKQPFKCLSCEKQFNNRIQLLSHSKIHETSIWNASGINDNSDNSTFLSEVHQPRIANDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVAVIAEVATDLEKCDGKEEKMNNFEPKQQIAQEQQLSQAVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNETIVSINENNQLVTNLHFLLTNGLVTIQTEESLLSQSSASPANNSQHRPAGVPDTGCALTTPNVVSDTNEQHAKDEIHIEQMLKTPANNCLLAISTVTPSLERQLEPFPKVITEETLPVVANKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRSRQSFLPKTSLQENTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -