Basic Information

Insect: Bombus superbus
Gene Symbol: ZNF236
Assembly: GCA_014737385.1
Location: JACXIK010000019.1:12318368-12327234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0024 0.16 12.2 2.1 2 23 179 200 178 200 0.96

2 26 0.00011 0.0072 16.4 1.1 1 23 206 228 206 228 0.98

3 26 3.1e-06 0.00022 21.2 0.4 2 23 234 255 234 255 0.97

4 26 0.0083 0.57 10.5 0.3 3 23 263 283 261 283 0.96

5 26 6.8e-05 0.0047 17.0 0.9 2 23 294 315 294 315 0.98

6 26 7.5e-07 5.2e-05 23.2 1.1 1 23 336 358 336 358 0.99

7 26 6.1e-07 4.2e-05 23.5 0.7 1 20 364 383 364 386 0.96

8 26 2.8e-05 0.0019 18.3 0.7 1 23 392 415 392 415 0.95

9 26 0.0026 0.18 12.0 2.2 3 23 426 447 424 447 0.97

10 26 1.9e-06 0.00013 21.9 2.1 1 23 570 592 570 592 0.98

11 26 0.00032 0.022 14.9 3.3 1 23 598 620 598 620 0.99

12 26 0.037 2.5 8.5 3.3 1 23 626 648 626 648 0.98

13 26 0.0028 0.19 12.0 6.7 1 23 739 761 739 761 0.98

14 26 3.4e-05 0.0023 18.0 5.1 1 23 767 789 767 789 0.99

15 26 0.00027 0.018 15.2 1.0 3 23 797 817 795 817 0.97

16 26 0.00041 0.028 14.6 7.6 1 23 823 845 823 845 0.98

17 26 2.4 1.7e+02 2.7 1.3 2 23 1243 1264 1242 1264 0.94

18 26 0.00071 0.049 13.8 1.3 1 23 1270 1292 1270 1292 0.98

19 26 0.0041 0.28 11.5 2.2 1 23 1298 1320 1298 1320 0.98

20 26 1e-07 7.2e-06 25.9 1.4 2 23 1399 1420 1398 1420 0.98

21 26 0.00074 0.051 13.8 3.5 1 23 1426 1448 1426 1448 0.99

22 26 9.5e-05 0.0065 16.6 1.9 1 23 1454 1476 1454 1476 0.98

23 26 0.00038 0.026 14.7 2.5 1 23 1482 1504 1482 1504 0.98

24 26 9.1e-06 0.00063 19.8 0.4 2 23 1729 1750 1728 1750 0.97

25 26 1.3e-05 0.00093 19.3 4.5 1 23 1756 1778 1756 1778 0.98

26 26 2.7e-06 0.00019 21.4 1.1 1 23 1784 1807 1784 1807 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0024	0.16	12.2	2.1	2	23	179	200	178	200	0.96
2	26	0.00011	0.0072	16.4	1.1	1	23	206	228	206	228	0.98
3	26	3.1e-06	0.00022	21.2	0.4	2	23	234	255	234	255	0.97
4	26	0.0083	0.57	10.5	0.3	3	23	263	283	261	283	0.96
5	26	6.8e-05	0.0047	17.0	0.9	2	23	294	315	294	315	0.98
6	26	7.5e-07	5.2e-05	23.2	1.1	1	23	336	358	336	358	0.99
7	26	6.1e-07	4.2e-05	23.5	0.7	1	20	364	383	364	386	0.96
8	26	2.8e-05	0.0019	18.3	0.7	1	23	392	415	392	415	0.95
9	26	0.0026	0.18	12.0	2.2	3	23	426	447	424	447	0.97
10	26	1.9e-06	0.00013	21.9	2.1	1	23	570	592	570	592	0.98
11	26	0.00032	0.022	14.9	3.3	1	23	598	620	598	620	0.99
12	26	0.037	2.5	8.5	3.3	1	23	626	648	626	648	0.98
13	26	0.0028	0.19	12.0	6.7	1	23	739	761	739	761	0.98
14	26	3.4e-05	0.0023	18.0	5.1	1	23	767	789	767	789	0.99
15	26	0.00027	0.018	15.2	1.0	3	23	797	817	795	817	0.97
16	26	0.00041	0.028	14.6	7.6	1	23	823	845	823	845	0.98
17	26	2.4	1.7e+02	2.7	1.3	2	23	1243	1264	1242	1264	0.94
18	26	0.00071	0.049	13.8	1.3	1	23	1270	1292	1270	1292	0.98
19	26	0.0041	0.28	11.5	2.2	1	23	1298	1320	1298	1320	0.98
20	26	1e-07	7.2e-06	25.9	1.4	2	23	1399	1420	1398	1420	0.98
21	26	0.00074	0.051	13.8	3.5	1	23	1426	1448	1426	1448	0.99
22	26	9.5e-05	0.0065	16.6	1.9	1	23	1454	1476	1454	1476	0.98
23	26	0.00038	0.026	14.7	2.5	1	23	1482	1504	1482	1504	0.98
24	26	9.1e-06	0.00063	19.8	0.4	2	23	1729	1750	1728	1750	0.97
25	26	1.3e-05	0.00093	19.3	4.5	1	23	1756	1778	1756	1778	0.98
26	26	2.7e-06	0.00019	21.4	1.1	1	23	1784	1807	1784	1807	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCACATGTCGAGACAATACCTATAAATCTTGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATCGTTGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGAGTCGTCACTGGTAGATGTAAAAAATTTTAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACGCAAAATTTTGAGATTGAGCCTAGTAGCATTGATCAAATAAATTTACAATCATGCAAAGAATTAACATGCAAGGAAACAGTTACACAGGAATATCAGTCTCTTTCTTTGAATGATTCATTAGCTAGTGAAAAGGATGGAAAAATTTGTAAACGAAAGACAATTAATACATCTGTGAAAAAAAATAGTCCTGGAAGACCCAAGAAAAACAAAGCAATTTCTTTGCAAGTAATTCAAGATACAGATAGTTTAACATGCGACATTTGCCATCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAGAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCGTTTAACGTGCCGACAAATTTTACGCTTCACATGGCAACACATAATACAGGTGAACCAAAATGTCCAGAATGTGGGAAAAAATTTGCGAGAATGGCTAGCTTAAAGTCTCATATGCTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAAACCCAATTAGATGCACATTTAAAGCTTCATGGGGAAAAATGGACGATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTGTATAGACTTCATATTCGTGAGCATTATAGGTTGCAGACAAAAGTAGTGAAACAAACGAAAAGAGGAACAAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCTTTCCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTTAAGTGTACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATATGTGGCAACACAATGGTATTCGACCTCATGCTTGCGAATTTTGCAACGCCAAGTTTAGTCAGAAAGGTAATTTGAATGCTCATATAATGAGAGTTCACAATGTCCCAGAAGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAGCTCGGCAGTTTGAATGGTCACATGAAACGTATGCATAACAATGTAAACGAGGAGAATACCATTAATGACAATACTCATTCGAGTAGTACCGTGGAGTCAGATATACGTGCAACAGTGGATAATGTTATAACACAACTGGCATCTTTGGAATCCGACATTAATCAAACTACAGAATCGTTAAATTTCGAACCGCAATTATTATCGGAAAATGTAACGAAAAAGGATATTTTGCAACAAGCATTGAAAAACAGTGGTCTTCCTAGTAAAAATAAAATTGCTTCTGAAGAGATAAAGAAGTTTGGAGCTCGTGTTAATTTTGTAACATTATTAGATCGAGCGCCTGATGGTGATACGAGAAAATATTTGACAATAAAACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCATAAAGAATTCAAAAAACCATCAGATTTGATACGTCATTTGCGTGTTCATACTCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTCAAACGTTACTCTTGTGGTTCCTGCGAGAAAACATTCGTGTGCCATAGTAGTTTAATTGCACATACTAGATTGCATGCAAAATCTGAAAATTGTTCCAATAAAACCACTGACAATGATAAGGATCCCGATACGTACACAGTAATTGATGCTAGCATTTATCCTACTGATCAATCGAAAAATCAAATAAAGGGTAAATTAAAATTATCACCTGAAGCAGAAAGCTTAGTACCGCAAGTTATCTTGCAAGAACCGCTGGTAATTAGTGATACAGGAAACAAAATTTCCGTGGTATCTTCGGGGAAGGAAAAACGTACTTATGATACAGCTACTGATCAAACCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCACTTGAAGCAACATCATCGTCGCCACACGGGAGAACGCCCATATAAATGCACAAAATGTGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCACACTCACGAAGATTCGAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCGAATATGAAGGAAAGTTCTAAACAAGAAGCGGCTCTCGAATCGTCTTCTTCTTCTTCTGCCTCTATCACTACTATCAATTCCACTATTACCACCAACATCTCTCTCACTACCACTGCCACTACCAGTACCACCCCTACCACCGTCACAACTTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCCCGTCTTGGATCGGTTGAATTGTCATTTCAGTCTCAGCTGGGATCAGAGCTGTCACAAGCTTTTCCCGAGTTTCAAAATATAACTGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACAAATTGCGATACTACAACATTTATTAATCAAAATGTAGCTGGAATAGCTGTAACAAATCTTGAAAATTCATCGATATTACAAGCTGATGAAGCTGGTTCGGTCACGTTGCCCGTTTACTCTGGCGAGCAGACACTTACCCCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTAGGAGGTAATCATTCGAGACATTCGAGTAGTACAAACACGAATGATTTTAGTCATATGAAAGAACAACAGCAACCTGTACTGAATGTTATATATGAAAATAACAATAACAATAATTGTAATAATAACGTAGAATCAGCTGGGGAACATGTATTTTCGACGCAATTAGATTCATTCGAGATGGACCATATTACTTTGCAATCAGATACTGAAATTGACATTGGACTAGATACAAGAAATTCGACTAGTATGGCGAGTATACTACCTAGGAATGTAAAAGATGAACATCGACTTTCTGTTTGTGTTACGACACCAGATGACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCTGTTGTATTCGTTTCCCAGCCAAATTTTTCCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGAAACTCAGAAGAACACTATTCACAAACAATGTATAATCAATCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGGATCAATCAAATACGCACACTTTGTCTTCCGATATTCCAGAAATCGTTAAAACCGCTACGGGCAAAGTATCCTGTGGACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGTGGAACGAAGGAATATCAGTGCACAGAGTGCTCTTCTAAATTTTACACAAATGGCGGATTAAATAGACATTCGAAGATTCATGTCATTAAGCAACCATTTAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAACCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAATATGGAACGCTTCAGGGATAAATGATAATTCAGATAATTCGACGTTTCTGTCGGAAGTGCATCAATCACGGATTGCAAATAGCCATTCAACATTAAATAATATTATGATAGAACCCGATTCTGCCGTTTCGGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGCTGGAAAAGAAGGAACGAAAAGAGTATACAAACAAATGCAAGTATTGTCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCATACAAGTGCGATTATTGCAGTAAAAGTTTTGCTGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGCTGCCATGTGTGCAACAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACTGGTTCGAAACCATTTAGATGTCCTATTTGCGATTCGAGATTTCGAACATCTGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACATAAAGATAATCCAAAGAGAAAACAGAAACATTTGAAAGTTGCAGTCATAGCTGAAGTAGCAAGTGATCTTGAGAAATGTGACGCAAAGGAAGAGAAAATGAATAATTTTGAGCCAAAGCAGCAAATAGCACAGGAACAGCAGCTGTCACAGGCAGTTGAAGGATTAACGTCCCATTTAGAGGCATATAGTATTGAAACAGCTGCTACCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAGACGATAGTATCCATAAACGAAAACAATCAGTTAGTTACGAATTTACACTTTCTTTTGACAAATGGTCTTGTTACCATACAAACTGAAGAATCGTTGTTGTCACAATCATCTACATCACCAGCTAACAATTCACATCATCGACCGGCTGGGGTTCCCGATACTGGGTGTGCACTAACAACACCCAGCGTCGTATCTGATACTAACGAACAACATGCCAAGGACGAAATTCATATAGAACAAATGTTAAAAACGCCATCGAATAATTGCCTTTTAGCGATATCAACCGTAACACCATCGCTGGAACGACAGCTGGAACCATTTTCAAAAGTGACTACGGGAGAAACGCTATCAGTAGTAGCCGATAAACCCGCGATTAAAGGGAATCCATCGAAAAAAGAATGCGACATTTGTGGGAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGACCATATAAGTGTGACTTATGTACGAAATCATTTGCCCAAAAATCAACTCTACAGATGCATCAAAAACACCACACTGGCGACCGACCATACGCTTGTTCGTATTGCGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTACATCAACTGGATACTGTTGACGTCAGGAAATGGAAACGTAACCGCCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAATCTAAATTTAGACAACATATCGTTCGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVETIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAESSLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFEIEPSSIDQINLQSCKELTCKETVTQEYQSLSLNDSLASEKDGKICKRKTINTSVKKNSPGRPKKNKAISLQVIQDTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHMWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHNNVNEENTINDNTHSSSTVESDIRATVDNVITQLASLESDINQTTESLNFEPQLLSENVTKKDILQQALKNSGLPSKNKIASEEIKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYSCGSCEKTFVCHSSLIAHTRLHAKSENCSNKTTDNDKDPDTYTVIDASIYPTDQSKNQIKGKLKLSPEAESLVPQVILQEPLVISDTGNKISVVSSGKEKRTYDTATDQTRPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKESSKQEAALESSSSSSASITTINSTITTNISLTTTATTSTTPTTVTTSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSSILQADEAGSVTLPVYSGEQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTNDFSHMKEQQQPVLNVIYENNNNNNCNNNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDDINVEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNTIHKQCIINPIFFTEDFRGTSQDFKDQSNTHTLSSDIPEIVKTATGKVSCGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVIKQPFKCLSCEKQFNNRTQLLSHSKIHETSIWNASGINDNSDNSTFLSEVHQSRIANSHSTLNNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVAVIAEVASDLEKCDAKEEKMNNFEPKQQIAQEQQLSQAVEGLTSHLEAYSIETAATCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTEESLLSQSSTSPANNSHHRPAGVPDTGCALTTPSVVSDTNEQHAKDEIHIEQMLKTPSNNCLLAISTVTPSLERQLEPFSKVTTGETLSVVADKPAIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDVRKWKRNRQSFLPKTSLQENTIEAKNLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -