Basic Information

Insect: Bombus muscorum
Gene Symbol: ZNF236
Assembly: GCA_963971185.1
Location: OZ020131.1:2181958-2189876[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0027 0.3 12.2 2.1 2 23 176 197 175 197 0.96

2 26 0.00012 0.013 16.5 1.1 1 23 203 225 203 225 0.98

3 26 3.6e-06 0.0004 21.2 0.4 2 23 231 252 231 252 0.97

4 26 0.0096 1.1 10.5 0.3 3 23 260 280 258 280 0.96

5 26 7.8e-05 0.0086 17.0 0.9 2 23 291 312 291 312 0.98

6 26 8.6e-07 9.5e-05 23.2 1.1 1 23 333 355 333 355 0.99

7 26 3.4e-06 0.00037 21.3 0.8 1 20 361 380 361 383 0.95

8 26 3.2e-05 0.0036 18.3 0.7 1 23 389 412 389 412 0.95

9 26 0.003 0.34 12.0 2.2 3 23 423 444 421 444 0.97

10 26 2.2e-06 0.00024 21.9 2.1 1 23 567 589 567 589 0.98

11 26 0.00037 0.041 14.9 3.3 1 23 595 617 595 617 0.99

12 26 0.031 3.5 8.9 1.9 1 23 623 645 623 645 0.97

13 26 0.0032 0.35 12.0 6.7 1 23 736 758 736 758 0.98

14 26 3.9e-05 0.0043 18.0 5.1 1 23 764 786 764 786 0.99

15 26 0.0003 0.034 15.2 1.0 3 23 794 814 792 814 0.97

16 26 0.00047 0.052 14.6 7.6 1 23 820 842 820 842 0.98

17 26 2.8 3.1e+02 2.7 1.3 2 23 1241 1262 1240 1262 0.94

18 26 0.00081 0.09 13.9 1.3 1 23 1268 1290 1268 1290 0.98

19 26 0.0081 0.9 10.7 1.6 1 23 1296 1318 1296 1318 0.98

20 26 1.2e-07 1.3e-05 25.9 1.4 2 23 1397 1418 1396 1418 0.98

21 26 0.00085 0.093 13.8 3.5 1 23 1424 1446 1424 1446 0.99

22 26 0.00011 0.012 16.6 1.9 1 23 1452 1474 1452 1474 0.98

23 26 0.00044 0.049 14.7 2.5 1 23 1480 1502 1480 1502 0.98

24 26 1e-05 0.0012 19.8 0.4 2 23 1726 1747 1725 1747 0.97

25 26 1.5e-05 0.0017 19.3 4.5 1 23 1753 1775 1753 1775 0.98

26 26 3.1e-06 0.00035 21.4 1.1 1 23 1781 1804 1781 1804 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0027	0.3	12.2	2.1	2	23	176	197	175	197	0.96
2	26	0.00012	0.013	16.5	1.1	1	23	203	225	203	225	0.98
3	26	3.6e-06	0.0004	21.2	0.4	2	23	231	252	231	252	0.97
4	26	0.0096	1.1	10.5	0.3	3	23	260	280	258	280	0.96
5	26	7.8e-05	0.0086	17.0	0.9	2	23	291	312	291	312	0.98
6	26	8.6e-07	9.5e-05	23.2	1.1	1	23	333	355	333	355	0.99
7	26	3.4e-06	0.00037	21.3	0.8	1	20	361	380	361	383	0.95
8	26	3.2e-05	0.0036	18.3	0.7	1	23	389	412	389	412	0.95
9	26	0.003	0.34	12.0	2.2	3	23	423	444	421	444	0.97
10	26	2.2e-06	0.00024	21.9	2.1	1	23	567	589	567	589	0.98
11	26	0.00037	0.041	14.9	3.3	1	23	595	617	595	617	0.99
12	26	0.031	3.5	8.9	1.9	1	23	623	645	623	645	0.97
13	26	0.0032	0.35	12.0	6.7	1	23	736	758	736	758	0.98
14	26	3.9e-05	0.0043	18.0	5.1	1	23	764	786	764	786	0.99
15	26	0.0003	0.034	15.2	1.0	3	23	794	814	792	814	0.97
16	26	0.00047	0.052	14.6	7.6	1	23	820	842	820	842	0.98
17	26	2.8	3.1e+02	2.7	1.3	2	23	1241	1262	1240	1262	0.94
18	26	0.00081	0.09	13.9	1.3	1	23	1268	1290	1268	1290	0.98
19	26	0.0081	0.9	10.7	1.6	1	23	1296	1318	1296	1318	0.98
20	26	1.2e-07	1.3e-05	25.9	1.4	2	23	1397	1418	1396	1418	0.98
21	26	0.00085	0.093	13.8	3.5	1	23	1424	1446	1424	1446	0.99
22	26	0.00011	0.012	16.6	1.9	1	23	1452	1474	1452	1474	0.98
23	26	0.00044	0.049	14.7	2.5	1	23	1480	1502	1480	1502	0.98
24	26	1e-05	0.0012	19.8	0.4	2	23	1726	1747	1725	1747	0.97
25	26	1.5e-05	0.0017	19.3	4.5	1	23	1753	1775	1753	1775	0.98
26	26	3.1e-06	0.00035	21.4	1.1	1	23	1781	1804	1781	1804	0.97

Sequence Information

Coding Sequence: atgttgacGCGACACAGTGTAGTTACAGAATCTTCTTCACATGTCGATACAATACCTATAAATCTCGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGCATCGCCACTAGTagatgtaaaaaattttaatggaaaTCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACACAAAATTTAGAGACTGAGCCTAGTAACAttgatcaaataaaattacaatcaaGCAGAGAATTAACATGTAAGGAAACAGTTACACAAGAATATCAGTCTCTTTCTTCGAATGATTCAGTAGCTAGTGAAAAGGatggaaaaatttgtaaacaGAAGCCAGTTAATACATCTGTGAAAAAAAATAGCCCTGGAAGACCCAAGAAAAACAAAGCAATTTCTTTGCAAGATACAGATAGTTTAACATGCGACATTTGCCACCAAGAATTTGGCAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCGAAATGTTCTGCCTCTTTCAACGTGCCGACAAATTTTACACTTCACATGGCAACGCATAATACAGGTGAACCCAAATGTCCAGAATGTGGGAAAAAATTTGCGAGAATGGCCAGCTTAAAGTCTCATATGTTGTTacatgaaaaagaagaaaacttaTTCTGTACAGAATGTGAAGATGCTTTCTCGACAAAGACTCAATTAGATGCACATTTAAAGCTACATGGGGAAAAGTGGTCGGTTGAAGAAGtacgaaaatgtaaattatgtaataaacaGTTCAGTCAACCCGCCTTATATAGGCTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGGGGGACAAAACACAAAACAATGTATAAGTGTACCATATGTTTGAAGTCTTTTCAAAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTCAAGTGTACAGACTGCGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATACGTGGCAACACAACGGTATTCGACCTCACGCTTGTGAGTTTTGCAACGCCAAGTTTAGTCAGAAAgGTAATTTGAATGCTCATATAATGAGAGTTCACAATATCCCAGAAGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACCATTAATGACAATACTCATTCGAGTAATACCGTGGAGTCTGATATACGTGCAACAGTTGATAGCGTTATAACACAACTGGCATCTTTAGAATCCGACATTCATCAAACTACAGAATCGTCAAATTTCGAACCTCGTTTATTATCGGAAAACGTAACGAAAAAGGATATTTTACAACAAGCATTGAAAAACAGTGGTCTTcctagtaaaaataaaattgcttcTGAAGAGATAAAGAAATTTGGAACTCGTgttaattttgtaacattATTGGATCGAGCGCCTGACGGTGATACGAGaaaatatttgacaataAAACAACGATGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAATTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACGCAGGAAAAACCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGTGGTTCCTGCGAGAAAGCATTCGTGTGCCATAGTAGTTTAATTGCACATACTAGATCGCATGCAAAATCCGAAAATTGTTCAAATAAAACCATTGACAATGATAAGGACCCCGACACATATGCAGTAATTGATGCTGACATTTATCCTACTGATCaattgaaaaatcaaataaagggtaaatttaaattatcacCAGAAGTAGAAAGTTTAGTACCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGAtacaggaaataaaatttccgtGGTATCTTCGGGAAAGGAAAAACGTGCTTATGATACGTCTACTGATCAGGCCAGACCCCACAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCACTTGAAGCAACATCATCGCCGCCACACGGGAGAACGTCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGTGTTCTAAAATCGCATTTGCATACTCACGAAGATTCGAGACCATACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTCAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAGCATGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCAAATATGAAGGAAAGTTCTAAACAAGAAACGGCTCTTGAATcgtcttcctcctcttctgcCTCTATCACTACTATTAATTCCACTATTACCAGCAACATCTCCATCACTACCACTGCCACTACCAATACCACCCCTACCACCGTCACAACTTCCTGCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAATCGCAGCTCGGATCAGAGCTTTCACAAGCTTTTCCcgagtttcaaaatataaccgaaggaaaggaaaaaataagacCAGTTTTAGCAACAAGTTGCGATACTACAACGTTTATTAATCaaaatgtagCGGGAATAGCTGTAACAAATCTTGAAAATTCATCAATATTACAAGCTGATGAAGCTGGTTCAGTCACGTTGCCCGTTTATTCTGGCGATCAAACACTTACACCGGAAAGTATAcgagaaatagaagaaacttTGAATCAACAGTTTTTTAATATCGGTATGAATCTTAACCTAGGAGGTAATCACTCAAGACATTCGAGTAGTACAAATACGAGTGATTTTAATCATATGAAAGAACAACAGCAACCTGTATTGAAtgttatatatgaaaataacaataacagtAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACACAATTAGATTCATTTGAGATGGACCATATTACTTTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAATATGGCTAGTATACTACCTAGGAATGTAAAAGATGAACATCGTGTTTCTGTTTGTGTTACGACACCAGATAGCATAAATATTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTctccaaaaaagaaaatataacaaatgaaTTTACTGTAGAAGAAACCCAGAAGAACAGTATTCACAAACAATGTATAATCAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCACAAGATTTCAAGATTCAATCGAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCACTACGGGCAAAATATCCCGTGGACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGGTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACAGAGTGTTCTTCTAAATTTTACACAAATGGTGGATTAAATAGACATTCGAAGATTCATGTTGTCAAGCAACCATTTAAATGTTTATCGTGTGAGAAGCAGTTCAACAATAGAATCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAGTGTGGAATGCTTCAGGGATAAATGATAATTCAGATAATTCGACGTTTTTATCGGAAGTGCATCAACCACAGATTGCAAATGATCATtcaccattacataatattatgataGAACCCGATTCTGCCGTTTCTGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTGGAAaTTTTGCTGGAAAAGAAGGAACGAAAAGAGTATACaaacaaatgtaaatattgtCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCGTACAAGTGCGATTATTGCAGTAAAAGCTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGCTGCCATGTGTGCAATAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTCAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATCCaaagagaaaacaaaaacATTTGAAGGTTGCAGTCATAGCTGAAGTAGCGTCTGATCTTGAGAAATGTGAcggaaaggaagagaaaatgaataattttgagCCAAAGCAACAAATAGTACAGGAACAGCAGCTATCACAGGCAGTTGCAGGATTAACGTCCCATTTAGAGGCATATAGTATTGAAACAGCTGCTTCCTGTTTATCTgatcaaattaatttcgacACAGAAGGTATCGTATCGAACAACAATCAAACGATTGTGTCCATAAACGAAAACAATCAGTTAGTTACGAATTTGCACTTTCTTCTGACAAATGGTCTTGTTACCATACAAACCGAAGAATCGTTGTTGTCACAATCTGCATCACCAGCTAACAATTCGCAGCATCGGGCGGCTGGGGTTCCTGATACTGGGTGTGCACTAACAACACCCAACGTCGTATCTGATACTAACGAACAACATGCCAAGGATGAAATTCATATAGAACAAATGTTAAAAACGCCAGCAAATAATTGTCTTTTAGCGATATCAACTGTGACACCTTCGTTGGAACGACAGCTGGAACCATTTTCAAAGGTGACTACGGAAGAAACGTTACCAGTAGTAGCTAATAAACCAACGATTAAAGGGAACCCATCGAAAAAGGAATGCGACATTTGTgggaaaatatttacaaaaccGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGACCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACATCACACTGGCGATCGACCCTACGCTTGTTCGTACTGTGAATATTCTTTTACGCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTACATCAACTGGATACCGTTGACATCAGAAAATGGAAACGTAACCGTCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAGCACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTCGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESSSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNLETEPSNIDQIKLQSSRELTCKETVTQEYQSLSSNDSVASEKDGKICKQKPVNTSVKKNSPGRPKKNKAISLQDTDSLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWSVEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNIPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTINDNTHSSNTVESDIRATVDSVITQLASLESDIHQTTESSNFEPRLLSENVTKKDILQQALKNSGLPSKNKIASEEIKKFGTRVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKAFVCHSSLIAHTRSHAKSENCSNKTIDNDKDPDTYAVIDADIYPTDQLKNQIKGKFKLSPEVESLVPQVILQEPLVISDTGNKISVVSSGKEKRAYDTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNMKESSKQETALESSSSSSASITTINSTITSNISITTTATTNTTPTTVTTSCSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATSCDTTTFINQNVAGIAVTNLENSSILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFNHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTNMASILPRNVKDEHRVSVCVTTPDSINIEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTTTGKISRGQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQPFKCLSCEKQFNNRIQLLSHSKIHETSVWNASGINDNSDNSTFLSEVHQPQIANDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVAVIAEVASDLEKCDGKEEKMNNFEPKQQIVQEQQLSQAVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTEESLLSQSASPANNSQHRAAGVPDTGCALTTPNVVSDTNEQHAKDEIHIEQMLKTPANNCLLAISTVTPSLERQLEPFSKVTTEETLPVVANKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDIRKWKRNRQSFLPKTSLQESTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -