Basic Information

Insect: Bombus consobrinus
Gene Symbol: ZNF236
Assembly: GCA_014737455.1
Location: JACXIU010000018.1:2072516-2080513[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0023 0.18 12.2 2.1 2 23 176 197 175 197 0.96

2 26 0.0001 0.0081 16.5 1.1 1 23 203 225 203 225 0.98

3 26 3e-06 0.00024 21.2 0.4 2 23 231 252 231 252 0.97

4 26 0.008 0.64 10.5 0.3 3 23 260 280 258 280 0.96

5 26 6.5e-05 0.0052 17.0 0.9 2 23 291 312 291 312 0.98

6 26 7.2e-07 5.7e-05 23.2 1.1 1 23 333 355 333 355 0.99

7 26 2.8e-06 0.00022 21.3 0.8 1 20 361 380 361 383 0.95

8 26 2.7e-05 0.0022 18.3 0.7 1 23 389 412 389 412 0.95

9 26 0.0025 0.2 12.0 2.2 3 23 423 444 421 444 0.97

10 26 1.8e-06 0.00015 21.9 2.1 1 23 567 589 567 589 0.98

11 26 0.00031 0.025 14.9 3.3 1 23 595 617 595 617 0.99

12 26 0.047 3.8 8.1 1.6 1 23 623 645 623 645 0.97

13 26 0.0026 0.21 12.0 6.7 1 23 736 758 736 758 0.98

14 26 3.3e-05 0.0026 18.0 5.1 1 23 764 786 764 786 0.99

15 26 0.00025 0.02 15.2 1.0 3 23 794 814 792 814 0.97

16 26 0.00039 0.031 14.6 7.6 1 23 820 842 820 842 0.98

17 26 1.4 1.1e+02 3.4 1.3 2 23 1240 1261 1239 1261 0.94

18 26 0.00067 0.054 13.9 1.3 1 23 1267 1289 1267 1289 0.98

19 26 0.0068 0.54 10.7 1.6 1 23 1295 1317 1295 1317 0.98

20 26 1e-07 8e-06 25.9 1.4 2 23 1396 1417 1395 1417 0.98

21 26 0.0007 0.057 13.8 3.5 1 23 1423 1445 1423 1445 0.99

22 26 9.1e-05 0.0073 16.6 1.9 1 23 1451 1473 1451 1473 0.98

23 26 0.00037 0.03 14.7 2.5 1 23 1479 1501 1479 1501 0.98

24 26 8.7e-06 0.0007 19.8 0.4 2 23 1726 1747 1725 1747 0.97

25 26 1.3e-05 0.001 19.3 4.5 1 23 1753 1775 1753 1775 0.98

26 26 2.6e-06 0.00021 21.4 1.1 1 23 1781 1804 1781 1804 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0023	0.18	12.2	2.1	2	23	176	197	175	197	0.96
2	26	0.0001	0.0081	16.5	1.1	1	23	203	225	203	225	0.98
3	26	3e-06	0.00024	21.2	0.4	2	23	231	252	231	252	0.97
4	26	0.008	0.64	10.5	0.3	3	23	260	280	258	280	0.96
5	26	6.5e-05	0.0052	17.0	0.9	2	23	291	312	291	312	0.98
6	26	7.2e-07	5.7e-05	23.2	1.1	1	23	333	355	333	355	0.99
7	26	2.8e-06	0.00022	21.3	0.8	1	20	361	380	361	383	0.95
8	26	2.7e-05	0.0022	18.3	0.7	1	23	389	412	389	412	0.95
9	26	0.0025	0.2	12.0	2.2	3	23	423	444	421	444	0.97
10	26	1.8e-06	0.00015	21.9	2.1	1	23	567	589	567	589	0.98
11	26	0.00031	0.025	14.9	3.3	1	23	595	617	595	617	0.99
12	26	0.047	3.8	8.1	1.6	1	23	623	645	623	645	0.97
13	26	0.0026	0.21	12.0	6.7	1	23	736	758	736	758	0.98
14	26	3.3e-05	0.0026	18.0	5.1	1	23	764	786	764	786	0.99
15	26	0.00025	0.02	15.2	1.0	3	23	794	814	792	814	0.97
16	26	0.00039	0.031	14.6	7.6	1	23	820	842	820	842	0.98
17	26	1.4	1.1e+02	3.4	1.3	2	23	1240	1261	1239	1261	0.94
18	26	0.00067	0.054	13.9	1.3	1	23	1267	1289	1267	1289	0.98
19	26	0.0068	0.54	10.7	1.6	1	23	1295	1317	1295	1317	0.98
20	26	1e-07	8e-06	25.9	1.4	2	23	1396	1417	1395	1417	0.98
21	26	0.0007	0.057	13.8	3.5	1	23	1423	1445	1423	1445	0.99
22	26	9.1e-05	0.0073	16.6	1.9	1	23	1451	1473	1451	1473	0.98
23	26	0.00037	0.03	14.7	2.5	1	23	1479	1501	1479	1501	0.98
24	26	8.7e-06	0.0007	19.8	0.4	2	23	1726	1747	1725	1747	0.97
25	26	1.3e-05	0.001	19.3	4.5	1	23	1753	1775	1753	1775	0.98
26	26	2.6e-06	0.00021	21.4	1.1	1	23	1781	1804	1781	1804	0.97

Sequence Information

Coding Sequence: ATGTTGACGCGACACAGTGTAGTTACAGAATCTCCTTCACATGTCGATACAATACCTATAAATCTCGTTGCTACTGAGGATGGTCGAACGCTTCTAGCAGTAACTGAACATAAAGACGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAGTGAAGCAGCATCGCCACTAGTAGATGTAAAAAATTTCAATGGAAATCTAATATTACATTCGCCTGTTTTTCAAATAAGCGTTGAAAATATTGTCAATGAGTCAGAACTTCAGCAATCAACACAAAATTTTGAGACTGAGCCTAATAGCATTGATCAAATAAAGTTACAATCATGCAGAGAATTAACATGCAAGGAAACAGTTACACAAGAATATCAGCCTCTTTCTTCGAATGATTCAGTAGCTAGTGAAAAGGATGGAAAAACTTGTAAACAGAAGCCAATTAATACATCTGTGAAAAAAAATAGCCCTGGAAGGCCCAAGAAAAACAAAGCAATTTCTTTGCAAGATACAGATACTTTAACATGCGACATTTGCCACCAAGAATTTGGTAAACAAACATTATATCGGAAACATATGGAAAATCATGCAGAAGAAAAACCACATCGATGTCCAAAATGTTCTGCATCGTTCAACGTGCCGACAAATTTTACACTTCACATGGCCACACATAATACAGGTGAACCGAAATGTCCAGAATGTGGGAAAAAATTTGCTAGAATGGCTAGCTTAAAGTCTCATATGTTGTTACATGAAAAAGAAGAAAACTTATTCTGTACAGAATGCGAAGATGCTTTCTCGACAAAGACTCAATTAGATGCACATTTAAAACTACATGGGGAAAAGTGGACGATTGAAGAAGTACGAAAATGTAAATTATGTAATAAACAGTTCAGTCAACCCGCCTTGTATAGACTTCATATTCGTGAGCACTATAGGTTGCAGACAAAAGTAGTAAAACAAACGAAAAGAGGAACAAAACACAAAACAATGTATAAGTGCACCATATGTTTGAAGTCTTTTCAAAAGCCGAGTCAATTGATGCGGCATATTAGAGTGCATACCGGTGAAAAACCTTTCAAGTGTACAGACTGTGGTCGTGCATTCACGCAAAAGAGTTCGCTGCAAATTCATACGTGGCAACACAATGGTATTCGACCTCATGCTTGTGAGTTTTGCAACGCCAAGTTTAGCCAGAAAGGTAATTTGAACGCTCACATAATGAGAGTTCACAATGTCCCAGAAGGAGAACCTATATACGGATGTAATTATTGTTCATGCGTGTTTAAAAAACTCGGCAGTTTGAATGGTCACATGAAACGTATGCATACCGATGTAAACGAGGAGAATACTATTAATGACAATACTCATTCGAGTAATACCGTGGAGTCTGATATACGTGCAACAGTTGATAGTGTTATAACACAACTGGCATCTTTAGAATCCGACATTCATCAAACTACAGAATCGTCAAATTTCGAACCGCGTTTATTAACGGAGAACGTAACGAAAAAGGATATTTTACAACAAGCATTGAAAAACAGTGGTCTTCCTAGTAAAAATAAAATTGCTTCTGAAGAGATAAAGAAGTTTGGAACTCGTGTTAATTTTGTAACATTATTGGATCGAGCGCCTGATGGTGATACAAGAAAATATTTGACAATAAAACAACGATGCGTAGGAAACGTGAGATGGTACGCTTGTACATTTTGTCACAAAGAGTTCAAAAAACCGTCAGATTTGATACGTCATTTGCGTGTTCATACGCAAGAAAAGCCTTTTAAGTGCACCCACTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGTACGCATTCAAGTGTTAAACGTTACGCTTGTGGTTCCTGCGAGAAAGCATTCGTGTGCCATAGTAGTTTAATTGCACACACTAGATTGCATGCAAAGTCCGAAAATTGTTCAAATAAAACCACTGACAATGATAAGGATCCCGACACATATGCAGTAATTGATGCTGACATTTATCCTACTGATCAATTGAAAAATCAAATAAAGGGTAAATTAAAATTATCACCGGAAGTAGAAAGTTTAGTATCTCAAGTTATCTTGCAAGAACCGTTGGTAATTAGTGATACAGGAAATAAGATTTCCGTGGTATCTTCGGGAAAGGAAAAACGTGCTTATGATACATCTACTGATCAGGCCAGACCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAAATCAGTCACTTGAAGCAACATCATCGCCGCCACACGGGAGAACGTCCATATAAATGCACAAAATGCGATAGGAGATTTACATCGAATAGCGTTCTAAAATCGCATTTGCATACTCACGAAGATTCGAGACCGTACGGTTGTTCTCTTTGTAATGCGAAATTTTCTACACAAAGCAGCATGAAAAGACACTTGGTCACTCACAGTAATAAAAGACCGTTCATGTGCCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAGATACATAAGCATGAATTGGCACAACGGCAATTGGAACAACAGAAAATCAGAATACAAGAACAAGCTTCAGACAAGTCAAATGTGAAGGAAAGTTCTAAACAAGAAGCGGCTCTTGAATCGTCTTCCTCCACTTCTGCCTCTATCACTACTATTAATTCCACTATTACCAGCAACATCTCCATCACTACCACTGCCACTACCAGTACCGCCCCTACCACCGTCACGACTTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCATTTCAATCACAGCTCGGATCAGAGCTTTCACAAGCTTTTCCCGAGTTTCAAAATATAACTGAAGGAAAGGAAAAAATAAGACCAGTTTTAGCAACAAATTGCGATACTACAACGTTTATTAATCAAAATGTAGCGGGAATAGCTGTAACAAATCTTGAAAATTCATCAATATTACAAGCTGATGAAGCTGGTTCAGTCACGTTACCCGTTTACTCTGGCGATCAGACACTTACACCGGAAAGTATACGAGAAATAGAAGAAACTTTGAATCAACAGTTTTTTAATATCGGGATGAATCTTAACTTGGGAGGTAATCACTCGAGACATTCGAGTAGTACAAACACGAGTGACTTTAGTCATATGAAAGAACAACAGCAACCTGTATTGAATGTTATATATGAAAATAACAATAACAGTAACTGTAATAGTAACGTAGAATCAGCTGGAGAACATGTATTTTCGACGCAATTAGATTCATTTGAGATGGACCATATTACTTTGCAATCGGATACTGAAATTGACATTGGACTAGATACAAGAAATTCAACTAGTATGGCGAGTATACTACCTAGGAATGTAAAAGATGAACATCGTCTTTCTGTTTGTGTTACGACACCAGATAACATAAATGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTTGTATTTGTTTCCCAGCCAAACTTCTCCAAAAAAGAGAATATAACAAATGAATTTACTGTAGAAGAAACCCAGAAGAACAGTATTCACAAACAATGTATAATCAACCCGATATTCTTTACAGAAGACTTTCGGGGAACATCGCAAGATTTCAAGATTCAATCAAATATGCACGCTTTGTCATCCGATGTTCCAGAAATCGTTAAAACCGCTACGGGCAAACTATCCCGTGCACAATCTCTATTACAGTGTCATATGTGTAGCCAACAAGGATTCACGACAGTTGCTTTAAAGGAACATTTGACAAGCCATCGCGGAACGAAGGAATATCAGTGCACAGAGTGCTCTTCTAAATTTTACACAAATGGTGGATTAAATAGACATTCGAAGATTCATGTCGTCAAGCAACCATTCAAATGTTTATCGTGTGAGAAGCAGTTTAACAATAGAATCCAATTGCTATCACATAGTAAAATTCATGAAACTTCAGTATGGAATGCTCCAGGGATAAATGATAATTCAGATAATTCGACGTTTTTATCGGAGGTGCATCAACCACGGATTGCAAATGATCATTCGCCATTACATAATATTATGATAGAACCTGATTCTGCCGTTTCCGAGAAAGTTCTGTTGGATACAGTAGCTGAAAAAGAAGTAATGGATCAAGTAGAAATTTTGCTGGAAAAGAAAGAACGAAAAGAGTATACGAACAAATGTAAATATTGTCCGAAAACTTTTCGCAAACCAAGCGATCTTATAAGACATGTACGCACACACACAGGAGAACGACCATACAAGTGCGATTATTGCAGTAAAAGTTTTGCCGTAAAATGTACTTTGGATTCTCATACAAAAGTTCATACGGGCAAAAAGACATTTCGCTGCCATGTGTGCAATAGTTTATTTGCGACTAAAGGTAGCTTGAAAGTTCACATGCGTTTACATACCGGTTCGAAACCATTTAGATGTCCTATATGCGATTCGAGATTTCGAACATCCGGCCATAGGAAAGTACACTTATTGAAACATGCACGCGAACACAAAGATAATCCAAAGAGAAAACAAAAACATTTGAAGGTTGCAGTCATAGCTGAAGTAGCGACTGATCTTGAGAAATGTGACGGAAAGGAAGAGAAAATGAATAATTTTGAGCCAAAGCAGCAAATAGCACAGGAACAGCAGCTATCACAGGCAGTTGCAGGATTAACGTCCCATTTAGAGGCATATAGCATTGAAACAGCTGCTTCCTGTTTATCTGATCAAATTAATTTCGACACAGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAACAATCAGTTAGTCACGAATTTACACTTTCTTCTGACAAATGGTCTTGTTACTATACAAACCGAAGAATCGTTGTTGTCACGATCATCTGCATCGCCAGCTAATAATTCGCAGCATCGACCGGCTGGGGTTCCCGATACTGGGTGTGCACTAACAACACCCAGCGTCGTATCTGATACTAACGAGCAACATGCCAAGGATGAAATTCATATAGAACAAATGTTGAAAACGCCAGCAAATAATTGCCTTTTGGCGATATCAACTGTGACACCTTCATTGGAACGACAGCTGGACCCATTTTCAAAGGTGACTACGGAAGAAACGTTACCAGTAGTAGCCAATAAACCGACGATTAAAGGGAATCCATCGAAAAAGGAGTGCGACATTTGTGGGAAAATATTTACAAAACCGTATCAAGTCGAAAGACATAAACGAATTCATACGGGTGAACGGCCATACAAGTGTGATCTATGTACGAAATCATTTGCCCAAAAGTCAACTCTACAGATGCATCAAAAACACCATACTGGCGATCGACCCTACGCTTGTTCGTACTGTGAATATTCTTTTACTCAAAAAGGCAATCTTCGAACACATGTTAAACGCGTACATCAACTGGATACTATTGACATCAGGAAATGGAAACGTAGCCGTCAATCCTTCCTACCCAAAACATCTCTTCAGGAAAACACGATCGAAGCTAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTGCTTAAATAG
Protein Sequence: MLTRHSVVTESPSHVDTIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQSEAASPLVDVKNFNGNLILHSPVFQISVENIVNESELQQSTQNFETEPNSIDQIKLQSCRELTCKETVTQEYQPLSSNDSVASEKDGKTCKQKPINTSVKKNSPGRPKKNKAISLQDTDTLTCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWTIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTDCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPEGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEENTINDNTHSSNTVESDIRATVDSVITQLASLESDIHQTTESSNFEPRLLTENVTKKDILQQALKNSGLPSKNKIASEEIKKFGTRVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSSVKRYACGSCEKAFVCHSSLIAHTRLHAKSENCSNKTTDNDKDPDTYAVIDADIYPTDQLKNQIKGKLKLSPEVESLVSQVILQEPLVISDTGNKISVVSSGKEKRAYDTSTDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSLCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKIRIQEQASDKSNVKESSKQEAALESSSSTSASITTINSTITSNISITTTATTSTAPTTVTTSSSTFSDNLALSRLGSVELSFQSQLGSELSQAFPEFQNITEGKEKIRPVLATNCDTTTFINQNVAGIAVTNLENSSILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGGNHSRHSSSTNTSDFSHMKEQQQPVLNVIYENNNNSNCNSNVESAGEHVFSTQLDSFEMDHITLQSDTEIDIGLDTRNSTSMASILPRNVKDEHRLSVCVTTPDNINVEQSEKSGVQAVVFVSQPNFSKKENITNEFTVEETQKNSIHKQCIINPIFFTEDFRGTSQDFKIQSNMHALSSDVPEIVKTATGKLSRAQSLLQCHMCSQQGFTTVALKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQPFKCLSCEKQFNNRIQLLSHSKIHETSVWNAPGINDNSDNSTFLSEVHQPRIANDHSPLHNIMIEPDSAVSEKVLLDTVAEKEVMDQVEILLEKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNPKRKQKHLKVAVIAEVATDLEKCDGKEEKMNNFEPKQQIAQEQQLSQAVAGLTSHLEAYSIETAASCLSDQINFDTEGIVSNNNQTIVSINENNQLVTNLHFLLTNGLVTIQTEESLLSRSSASPANNSQHRPAGVPDTGCALTTPSVVSDTNEQHAKDEIHIEQMLKTPANNCLLAISTVTPSLERQLDPFSKVTTEETLPVVANKPTIKGNPSKKECDICGKIFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTIDIRKWKRSRQSFLPKTSLQENTIEAKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00217878;
80% Identity: -