Alat000558.1
Basic Information
- Insect
- Aquatica lateralis
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- Alat1.3:1448313-1465919[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-107 1.4e-103 344.4 30.0 1 300 44 337 44 337 0.93 2 3 0.0043 21 2.4 4.7 120 171 335 386 334 398 0.85 3 3 0.073 3.6e+02 -1.6 6.1 131 236 363 409 348 412 0.49
Sequence Information
- Coding Sequence
- ATGAATTATAATCATTTTAAGTGTTTGTGGTGTCTTCTTTTTATTGTCATGGATGGTGGTGGCGGTCGCAGAAGAATTGCAGCCAAATCGTCTGCAGAAGATCAAGCGCTAGATTTAATTGCCAAGGAAGCGGAAGCTCGCCTTCTAGCAAGGCGTCAGGCTCGAGCAGAAGCTAGAGATATACGTATGCGCGAGTTAGAACGTCAACAAAAAGAACAAGAAGAAAATGCCGATCGACAGTATGATATGATAGAACAATCCCATCGTACCACTAGAACTAGTGGTAACCGATATTTATCTAGTCGCCGAAGTTCAGAAGATTCGTTAGAAGATGGAGGAAGCATTAGAGAAATACGACACGAACTCAAAGAAATGGAAGAAAAGTTTAGAAAAGCTATGATTGCTAATGCTCAATTAGACAATGATAAAACGTCCCAGACATATCAATTGGAACTCCTTAAGGATAGGTTAGAAGAGTTGGAAGAGGAATTTTCTCAACTTCGCCGTGAGCATCGAGATAAATGTCGAGAACACGATCAACTGAAGAGATTAGCGACGCGTTTAAAAGATGATTTTGCTGTTACTCGTTTAGAATTAGAAGAGAGGGATCGATTAATTGCCGAAAAAGGTTTAGTGATTGTAACAGAAGATACTTCTTTTTATGAAGAAGATGGAAGAGGAGATGGTACTGTCAATGGTGTCTGTGGTACTTTGAAAAAGTCGTTAGTTAGTGCCGAAAACGCGCAGTTGTTAGAAAATGCTGGAGAAGGTAGTTTAGATGTTCGATTAGGCAAATTTGCTTTAGAAAAAAAAGACCTACAGGACCAAATCAGTCATTTAAGATTAGAACTAGAAGAAGAAAAAAGTAGGAAAAGGAAGACTAGCGGAATAACTTTAAACGGGCCCACATCTGATTCTGATTATGATCCAGATGATGTTCAAAGAGACGTCGGGAGACAACTAGCAGATTTTAAGTTTCGAGCCCAAAAGGCGGAGCAGGATGTGGCCACATTGCAAGCTACGGTAGCTAGATTAGAGAGTCAAGTTATTAGATATAAATCGGCTGCCGAAATATACGAAAAGTCCGAAGAAGCCCTCAAGCAAGAAAAGAGAAAATTACAAAGAGAGGCACGGGAGGCACAAAATCGGGCAGAAGAGTTGGAAACTGCAAATAACCATTTATTAAAACGTCTAGATAAGCTTAAAAATGCCAAATCAACGCTACTTAAAGAACTCTGA
- Protein Sequence
- MNYNHFKCLWCLLFIVMDGGGGRRRIAAKSSAEDQALDLIAKEAEARLLARRQARAEARDIRMRELERQQKEQEENADRQYDMIEQSHRTTRTSGNRYLSSRRSSEDSLEDGGSIREIRHELKEMEEKFRKAMIANAQLDNDKTSQTYQLELLKDRLEELEEEFSQLRREHRDKCREHDQLKRLATRLKDDFAVTRLELEERDRLIAEKGLVIVTEDTSFYEEDGRGDGTVNGVCGTLKKSLVSAENAQLLENAGEGSLDVRLGKFALEKKDLQDQISHLRLELEEEKSRKRKTSGITLNGPTSDSDYDPDDVQRDVGRQLADFKFRAQKAEQDVATLQATVARLESQVIRYKSAAEIYEKSEEALKQEKRKLQREAREAQNRAEELETANNHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00153190; iTF_01517239; iTF_01295186; iTF_00002571; iTF_00031948; iTF_01345710; iTF_00949877; iTF_00950862; iTF_01284537;
- 90% Identity
- iTF_00153190;
- 80% Identity
- -