Mfla012357.1
Basic Information
- Insect
- Malthinus flaveolus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_950108345.1
- Location
- OX467287.1:25934641-25937510[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.069 1.4e+03 -1.5 1.2 233 269 16 52 11 77 0.68 2 3 6e-107 1.2e-102 343.4 33.9 1 300 100 392 100 392 0.93 3 3 0.086 1.8e+03 -1.9 7.1 129 231 416 459 393 467 0.47
Sequence Information
- Coding Sequence
- ATGTGTGACACGTTATCGAAGAATTCTAACAAAAGCGATAGTTTTGACTCTCTTTtggatttaataaataatttaaattccgaCACAGAAGAAGAAGAATGTAATAATCGAAACACAGCTGATTCGGATTTCAACGACAACGAGGTCTGTTTAAGAAAGAAAGATTTTAAAAGCGAAGATGCGCGTAAATTTTCTGAAGATGAAATGGACAACGaacaaataatttccaaaaattacgCTCGTACATCTGCAGATGGTAGAAttattaagcaatttttaaatgattgtAACGACGATgCAGAAGCGAGACTTTTGGCAAGAAGGCAAGCCAGAGCCGAGGCGAGAGACATCCGAATGAGAGAATTAGAAAGGCAACAGAGAGAACAAGAAGAAAATGCCGATAGGCAATACGATATGTTTGAACAAACTAATCGAACGGTTAGAACTACGCCGAGCAATCGATATCATTCTAGTAGACGAAGTTCTGAAGATTCGCTCGAAGACGGGGGAAGCATACGAGAAATTAGGCACGAACTTAAAGAAATGGAAGAGAAGTTTCGGAAAGCAATGATAGCCAATGCTCAATTGGATAACGATAAAGCGTCACAAACATATCAATTGGAGTTACTTAAAGATAGGTTAGAAGAATTAGAAGAGGAGCATTCTCAGCTTCGTCGTGAGCACAGAGATAAGTGTAGAGAATATGACCAGTTGAAGCGATTAGCGTCGCAGCTCAAAGATGACATTACTATAGCAAAAGCAGAATTAGAGGAAAGAGATCGTTTGATAGCAGAAAAAGGTTTAGTTATAGTCATAGAGGATCTTATTCCTAACGAAGAGCAAAGTGATATAAGTAATTGTAGTATCGGTAATACTCCTAAAAAGGCTCTCGTTAGTTCTCATAATGCCGAACTGTTAGAAAATTCCGGTGAGGGAAGTTTGGATGTTCGATTAGGAAGGTTTGCTTCGGAAAAGAAAGATTTGCAAGATCAAATTAGCCATTTACGTTTAGAATTAGAGGACGAACGaagtaaaaagagaaaaagtaGTGGAGCAACTCTTAATGGTCCGACATCGGATGCCGATTACGATGCCGACGATGTACAAAAAGATGCGGCAAGACAGTTggcagattttaaatttagggcTCAAAAGGCGGAACAAGATGTGGCAACCTTACAGGCGACGGTCGCTAGATTAGAAAGTCAAGTGATTAGGTATAAATCGGCGGCAGAAATGTACGAGAAGTCTGAAGAGGCTTTAAAGCAAGAGAAGAGGAAATTGCAAAGAGAGgCGCGCGAAGCACAGAATAGAGCCGAAGAATTAGAAACTTCAAATTCTCATCTGGTGAAAAGATtagataaacttaaaaatgccAAATCAACTCTACTCAAAGAACTTTGA
- Protein Sequence
- MCDTLSKNSNKSDSFDSLLDLINNLNSDTEEEECNNRNTADSDFNDNEVCLRKKDFKSEDARKFSEDEMDNEQIISKNYARTSADGRIIKQFLNDCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMFEQTNRTVRTTPSNRYHSSRRSSEDSLEDGGSIREIRHELKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREYDQLKRLASQLKDDITIAKAELEERDRLIAEKGLVIVIEDLIPNEEQSDISNCSIGNTPKKALVSSHNAELLENSGEGSLDVRLGRFASEKKDLQDQISHLRLELEDERSKKRKSSGATLNGPTSDADYDADDVQKDAARQLADFKFRAQKAEQDVATLQATVARLESQVIRYKSAAEMYEKSEEALKQEKRKLQREAREAQNRAEELETSNSHLVKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151782;
- 90% Identity
- -
- 80% Identity
- -