Sper024035.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- lrrfip2
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000088.1:9830416-9831959[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-106 9.3e-102 342.7 37.7 1 300 88 380 88 380 0.95 2 2 0.011 9.9e+02 1.1 0.6 120 162 378 420 378 421 0.88
Sequence Information
- Coding Sequence
- ATGAGTGATGCACGTTCGAAACGTTCCGTTTCCTCAGGTAGTTTGGACTCGCTCACGAACATTTTGAACAATTTGAATTCTGATGACGAAACCGATGAGAAACCAGAGAACGGTTTGAACTCCAAAGACGTTTCGAGTGACGAAAACGAAGCTAGAGGGCGTCGCGATTGTGCCGAAGAGAAAATTGCTTACGCCCATGAAAACCCGGGTTATTCGAACGAAAATGTCATAAAACAGTTTCTGAATCATTGTAACAGCGACGCCGAGGCACGGCTGTTGGCTCGCAGGCAAGCTAGGGCAGAGGCTAGGGATATCCGCATGCGGGAGCTGGAGCGCCAGCAGCGTGAGCAGGAAGAAAACGCAGACCGGCAGTATGACATGTTGGAGGCGTCAACACGAGCAGCCCGATCTGCCGGGAGTCGGTACCTCTCCAGTAGGCGCAGCTCCGAAGACTCCCTTGAGGATAGCGGCAGCATCAGGGAGATACGGCACGAGCTCAAGGAGATGGAGGAAAAATTCCGCAAGGCTATGATAGCTAATGCTCAATTAGACAATGATAAAGCAGCACAAACTTATCAGCTGGAATTGTTAAAGGATAGGTTAGAAGAATTGGAAGAAGAGCACACGCAACTGAGGCGGGAACATAGAGATAAGTGTAGGGAACATGAACAGTTGAAACGGTTAGCAGCTCGGCTCAAGGATGATTTGGCTGTGACTAGAGCAGAACTAGAAGAGCGGGATCGTTTGATTGCCGAAAAAGGGCTAGTGATAATCATGGAAGACAGTTTTCAATATGATGATGAAAGTATGGGAGATGTCAGCAGCAATAGCGTCGTTACTCCTAAAAAAACCCTTGTTACTGCAGAGAATGCCAAGTTGTTGGAGAGCGCAGGGGAAGGCAATTTAGATGTGCGGTTAGCAAGATTTGCTTCCGAAAAGAAGGACTTGCAGGATCAAATCAGTCATCTGAGGTTAGAGTTGGAGGACGAAAAGAGCAAGAAACGAAAAATTAGTGGCGTTACTCTTAATGGGCCTACGACAGAGACTGATTTCGATGCAGATGATGTGCAAAgGGACATTGTTAGGCAGTTAGCAGATTACAAATTTAAAGCCCAAAAGGCTGAGCAAGATGTAGCAACACTGCAAGCAACGGTTGCACGGCTTGAAAGCCAAGTGATTAGGTATAAATCAGCGGCTGAGATGTACGAGAAGTCGGAGGAGGCTTTGAAACAGGAAAAGCGGAAGTTACAAAGAGAGGTGAACTGA
- Protein Sequence
- MSDARSKRSVSSGSLDSLTNILNNLNSDDETDEKPENGLNSKDVSSDENEARGRRDCAEEKIAYAHENPGYSNENVIKQFLNHCNSDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEASTRAARSAGSRYLSSRRSSEDSLEDSGSIREIRHELKEMEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHTQLRREHRDKCREHEQLKRLAARLKDDLAVTRAELEERDRLIAEKGLVIIMEDSFQYDDESMGDVSSNSVVTPKKTLVTAENAKLLESAGEGNLDVRLARFASEKKDLQDQISHLRLELEDEKSKKRKISGVTLNGPTTETDFDADDVQRDIVRQLADYKFKAQKAEQDVATLQATVARLESQVIRYKSAAEMYEKSEEALKQEKRKLQREVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151782;
- 90% Identity
- -
- 80% Identity
- -