Mser014530.1
Basic Information
- Insect
- Malthinus seriepunctatus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963924605.1
- Location
- OZ004602.1:25444353-25455750[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-108 9.8e-104 347.3 33.5 1 300 189 479 189 479 0.94 2 2 0.078 9.8e+02 -0.7 7.1 120 171 477 528 476 554 0.62
Sequence Information
- Coding Sequence
- ATGGTTGTTGATCCAAAGTTAACTGTGAATTCtgatttattgttaaaatttaagaaaggaCCATCTCTTGCCGATTGTTTATCGGATGTTGAATCAAATACGGAAAGTTCTAAATCCCACGTGGTTGTTGTAACTTCGTATCGTAAATGGAAGAAAGTTATTCTTGACTCAAAGCAGTATGTGTGTCCAAGCTGCGATGAAGTCTATCAAGAGCCTCCGACCGAAAACTGGATTCAATGTTTTTCATGTATAGCATGGTGGCACGAAGCGTGCACTAATTATGAAGACAGTGGTGATTTTAAGTGCGATTTTGCGTTTAGTCATCTTACCCCAATAGATTCAGAAGAAGATTGCAATGAtcaaaacgatcaaaataaagCAGATTTGACTTGTAACGACGACGAcgtttgtttaagaaaaaaaaattttgaaaaggaaGATTTATTTAACCTTTCTGAAAATGACATGGATAATAATTGTgaacaaattatttctaaaaattgcacTCGTACATCTGCAGATGGTagaattattaaacaatttttaagtgattGTAACGATGATGCAGAAGCGAGACTTCTGGCAAGAAGGCAAGCCAGAGCAGAGGCGAGAGACATCCGAATGAGAGAATTAGAAAGACAACAAAGAGAACAAGAAGAAAATGCTGATAGACAATACGATATGTTTGAACAAACTAGTCGAACGGTCCGAACTACACCTGTCAATCGATATCATTCTAGTAGACGAAGTTCAGAAGACTCGCTCGAAGATGGGGGAAGCATACGAGAAATTAGGcacGAGCTTAAAGAAATGGAAGAAAAGTTTCGAAAGGCGATGATCGCTAATGCTCAATTAGATAACGATAAAGCGTCGCAAACATATCAGTTGGAATTACTTAAAGATAGGTTAGAAGAATTAGAAGAGGAGCATTCTCAACTTCGTCGCGAGCACAGAGATAAATGTAGAGAATACGATCAATTAAAGCGATTAGCTTCGCAGCTCAAAGATGACATTACTATAGCTAAAGCCGAATTAGATGAAAGAGATCGTTTGATAGCCGAAAAAGGGTTAGTTATAGTCATAGAAGACCTTATTCCTAACGAAGAGCACAGTGATATAAGTAATGGTGGTAGTACTCCTAAAAAAGCTCTCGTTAGTGCTCAAAATGCCCAACTTTTAGAAAATTCCGGTGAAGGAAGTTTagATGTTCGATTAGGAAGGTTTGCTTCGGAAAAGAAGGACTTGCAAGATCAAATTAGCCATTTACGTTTAGAATTAGAAGAGGAAAGAAGTAAAAAGAGAAAAAGCAGCGGAACTACTCTTAACGGTCCTACGTCTGATGCCGATTATGATGCCGACGACGTACAAAaagATGCGGCAAGACAATTGGCAGACTTTAAATTTAGGGCTCAAAAAGCTGAACAAGATGTAGCGACTTTACAGGCGACTGTCGCTAGATTAGAGAGTCAAGTAATTAGATACAAATCTGCGTCAGAAATGTATGAGAAGTCCGAAGAGGCGCTAAAGCAAGAAAAAAGGAAATTACAAAGAGAGgcACGTGAAGCACAGAATAGAGCTGAAGAATTAGAAACATCGAATTCTCATCTGGTGAAAAGATTAGATAAACTTAAAAATGCCAAATCAACTTTACTCAAAGAACTTTGA
- Protein Sequence
- MVVDPKLTVNSDLLLKFKKGPSLADCLSDVESNTESSKSHVVVVTSYRKWKKVILDSKQYVCPSCDEVYQEPPTENWIQCFSCIAWWHEACTNYEDSGDFKCDFAFSHLTPIDSEEDCNDQNDQNKADLTCNDDDVCLRKKNFEKEDLFNLSENDMDNNCEQIISKNCTRTSADGRIIKQFLSDCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMFEQTSRTVRTTPVNRYHSSRRSSEDSLEDGGSIREIRHELKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREYDQLKRLASQLKDDITIAKAELDERDRLIAEKGLVIVIEDLIPNEEHSDISNGGSTPKKALVSAQNAQLLENSGEGSLDVRLGRFASEKKDLQDQISHLRLELEEERSKKRKSSGTTLNGPTSDADYDADDVQKDAARQLADFKFRAQKAEQDVATLQATVARLESQVIRYKSASEMYEKSEEALKQEKRKLQREAREAQNRAEELETSNSHLVKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151782;
- 90% Identity
- -
- 80% Identity
- -