Ppec023315.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_036250285.1
- Location
- CM070077.1:40618132-40622705[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-106 6.4e-102 342.3 30.1 1 300 98 391 98 391 0.93 2 2 0.011 5.5e+02 1.0 4.4 120 170 389 439 389 452 0.86
Sequence Information
- Coding Sequence
- ATGAATGACACAGACTTAAAAAATTCGATATCGTCTGAAAGCGTCGATTCCCTGAcggatattttaaataatttagacTCTGACGACGACGACCCATGTGATAATCATACAGACTTGAATGAAAACAAAGTAATTACCATTGAAAGCAACTCCTTCTCATTGGAGGATAAAACCTCGGAAAATCGGGAATCAAAGACAAATGGAATTGACAGCAACGAAAGTTTAATACTCGGTTATGGCAATGTACCGAATAACATCATTAATCAGTATCTTAACCATTGTAACGATGATgcAGAAGCACGACTCTTGGCAAGACGGCAGGCCCGGGCTGAGGCAAGAGACATTCGCATGCGGGAATTAGAACGCCAGCAAAAGGAGCAAGAGGAGAATGCCGATCGACAATATGACATGTTAGAAGCTACACATCGAACATCCCGAACGAGTGGGAATCGTTTCCTCTCCAGTCGGCGAAGTTCGGAGGATTCGCTTGAAGATGGCGGCAGTATTAGAGAAATTCGACATGAACTTAAAGAAATCGAAGAGAAGTTTCGAAAAGCTATGATCGCAAATGCTCAATTAGATAATGATAAAGCTTCACAAACATATCAGTTAGAACTTCTTAAAGATAGGCTAGAGGAATTAGAAGAAGAGTTTTCTCAACTTCGACGAGAACATAGGGATAAATGTAGGGAGCATGATCAATTAAAAAGGTTAGCGGCACGTCTCAAAGATGATTTGGCCGTGACCTGTTTAGAATTAGAAGAACGTGATCGCTTAATTGCGGAAAAGGGTTTAGTGATAGTGGTAGAAGATGTTCCTTGCTATGAAGACGAGAGTCGAGAAGATGTCACAGTTAATGGAATTTGTAGTACGCCGAAAAAAACTTTGGTTAGTGCCGAAAATGCACAACTATTAGAAAATGCGGGAGAAGGTAGTTTAGATGTTCGGTTAGCGAGGTTTGCTTTAGAGAAAAAAGATCTACAAGATCAAATCAGTCATTTAAGGTTAGAGTTAGAAGAAGAGAAGAATAGGAGACGGAAGACAAGTGGAGTAAGTTTAAATGGACCTACAACCGATTCAGATTATGATCCCGATGACATTCAAAGAGATGTGGGAAGACAGCTGGCCGATTATAAATTTAGAGCTCAAAAGGCGGAACAAGATGTCGCTACCTTACAAGCCACCGTAGCTAGATTAGAGAGTCAAGTAATTCGGTATAAATCCGCATCGGAGATATACGAAAAATCTGAGGAAGCCCTAAAACAGGAGAAAAGAAAATTGCAGAGAGAGGCACGAGAAGCACAAAATCGAGCAGAGGAATTCGAAACGGCAAATACCCATTTGTTGAAACGtttagataaattaaaaaatgccaaATCAACTTTACTTAAAGAACTCTGA
- Protein Sequence
- MNDTDLKNSISSESVDSLTDILNNLDSDDDDPCDNHTDLNENKVITIESNSFSLEDKTSENRESKTNGIDSNESLILGYGNVPNNIINQYLNHCNDDAEARLLARRQARAEARDIRMRELERQQKEQEENADRQYDMLEATHRTSRTSGNRFLSSRRSSEDSLEDGGSIREIRHELKEIEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEFSQLRREHRDKCREHDQLKRLAARLKDDLAVTCLELEERDRLIAEKGLVIVVEDVPCYEDESREDVTVNGICSTPKKTLVSAENAQLLENAGEGSLDVRLARFALEKKDLQDQISHLRLELEEEKNRRRKTSGVSLNGPTTDSDYDPDDIQRDVGRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSASEIYEKSEEALKQEKRKLQREAREAQNRAEEFETANTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151782;
- 90% Identity
- -
- 80% Identity
- -